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alexthiery/seurat-monocle : 0.1
Latest release: almost 2 years ago - 27 downloads - 1,062 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.52.0
- BH 1.81.0-1
- Biobase 2.50.0
- BiocGenerics 0.36.1
- BiocManager 1.30.21
- BiocParallel 1.24.1
- BiocVersion 3.12.0
- Biostrings 2.58.0
- DBI 1.1.1
- DDRTree 0.1.5
- DEoptimR 1.0-14
- DT 0.17
- DelayedArray 0.16.3
- DelayedMatrixStats 1.12.3
- FNN 1.1.3.2
- GenomeInfoDb 1.26.7
- GenomeInfoDbData 1.2.4
- GenomicRanges 1.42.0
- HDF5Array 1.18.1
- HSMMSingleCell 1.10.0
- IRanges 2.24.1
- KernSmooth 2.23-18
- Lahman 8.0-1
- MASS 7.3-53
- MAST 1.16.0
- Matrix 1.3-2
- Matrix 1.5-4.1
- MatrixGenerics 1.2.1
- MatrixModels 0.5-1
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RBGL 1.66.0
- RColorBrewer 1.1-3
- RCurl 1.98-1.12
- RMariaDB 1.1.0
- ROCR 1.0-11
- RPostgres 1.3.1
- RSQLite 2.2.5
- RUnit 0.4.32
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.12.4.1.0
- RcppEigen 0.3.3.9.3
- RcppGSL 0.3.13
- RcppGSLExample 0.0.3
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- RcppZiggurat 0.1.6
- Rdpack 2.4
- RdpackTester 1.0
- Rfast2 0.1.4
- Rfast 2.0.7
- Rhdf5lib 1.12.1
- Rtsne 0.16
- S4Vectors 0.28.1
- Seurat 4.3.0
- SeuratDisk 0.0.0.9020
- SeuratObject 4.1.3
- SingleCellExperiment 1.12.0
- SparseM 1.81
- SummarizedExperiment 1.20.0
- TFisher 0.2.0
- TH.data 1.1-2
- VGAM 1.1-8
- WriteXLS 6.4.0
- XML 3.99-0.14
- XVector 0.30.0
- abind 1.4-5
- ape 5.7-1
- annotate 1.68.0
- arrow 3.0.0
- askpass 1.1
- assertthat 0.2.1
- backports 1.2.1
- base64enc 0.1-3
- base 4.0.4
- beachmat 2.6.4
- beachtest 1.0.0
- biocViews 1.58.1
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.1
- boot 1.3-26
- brew 1.0-6
- brio 1.1.1
- broom 0.7.5
- bslib 0.5.0
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- cachem 1.0.8
- callr 3.6.0
- cellranger 1.1.0
- class 7.3-18
- cli 3.6.1
- clipr 0.7.1
- cluster 2.1.0
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- commonmark 1.9.0
- compiler 4.0.4
- covr 3.5.1
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.0
- crosstalk 1.2.0
- curl 5.0.1
- data.table 1.14.8
- datasets 4.0.4
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- deldir 1.0-9
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- desc 1.3.0
- devtools 2.3.2
- diffobj 0.3.4
- digest 0.6.31
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- dqrng 0.3.0
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- ellipsis 0.3.2
- enrichR 3.2
- evaluate 0.21
- fansi 1.0.4
- farver 2.1.1
- fastICA 1.2-3
- fastmap 1.1.1
- fitdistrplus 1.1-11
- fontawesome 0.5.1
- forcats 0.5.1
- foreign 0.8-81
- formatR 1.14
- fs 1.6.2
- fst 0.9.4
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.11.0
- future 1.32.0
- genefilter 1.72.1
- geneplotter 1.68.0
- generics 0.1.3
- gert 1.3.0
- ggplot2 3.4.2
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- ggridges 0.5.4
- gh 1.2.0
- gitcreds 0.1.1
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- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- gplots 3.1.3
- grDevices 4.0.4
- graph 1.68.0
- graphics 4.0.4
- grid 4.0.4
- gridExtra 2.3
- gtable 0.3.3
- gtools 3.9.4
- haven 2.3.1
- hdf5r 1.3.8
- here 1.0.1
- highr 0.10
- hms 1.0.0
- htmltools 0.5.5
- htmlwidgets 1.6.2
- httpuv 1.6.11
- httr 1.4.6
- ica 1.0-3
- igraph 1.5.0
- ini 0.3.1
- irlba 2.3.5.1
- isoband 0.2.7
- jquerylib 0.1.4
- jsonlite 1.8.5
- kernlab 0.9-32
- knitr 1.43
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.1
- lattice 0.20-41
- lazyeval 0.2.2
- leiden 0.4.3
- lifecycle 1.0.3
- limma 3.46.0
- listenv 0.9.0
- littler 0.3.12
- lmtest 0.9-40
- lubridate 1.7.10
- magrittr 2.0.3
- markdown 1.1
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- metap 1.8
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- org.testing.db 0.1
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- parallelly 1.36.0
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- pheatmap 1.0.12
- pillar 1.9.0
- pkgbuild 1.2.0
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- png 0.1-8
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- praise 1.0.0
- prettyunits 1.1.1
- processx 3.5.0
- progress 1.2.2
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- promises 1.2.0.1
- proxy 0.4-27
- ps 1.6.0
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- rhdf5filters 1.2.1
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- rmarkdown 2.22
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- spatial 7.3-13
- spatstat.data 3.0-1
- spatstat.explore 3.2-1
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- spatstat.random 3.1-5
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- splines 4.0.4
- stats4 4.0.4
- stats 4.0.4
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- sys 3.4.2
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- ubuntu/openjdk-8-jdk-headless 8u372-ga~us1-0ubuntu1~20.04
- ubuntu/openjdk-8-jdk 8u372-ga~us1-0ubuntu1~20.04
- ubuntu/openjdk-8-jre-headless 8u372-ga~us1-0ubuntu1~20.04
- ubuntu/openjdk-8-jre 8u372-ga~us1-0ubuntu1~20.04
- ubuntu/openmpi-bin 4.0.3-0ubuntu1
- ubuntu/openmpi-common 4.0.3-0ubuntu1
- ubuntu/openssh-client 1:8.2p1-4ubuntu0.7
- ubuntu/openssl 1.1.1f-1ubuntu2.17
- ubuntu/passwd 1:4.8.1-1ubuntu5.20.04.4
- ubuntu/patch 2.7.6-6
- ubuntu/perl-base 5.30.0-9ubuntu0.3
- ubuntu/perl-modules-5.30 5.30.0-9ubuntu0.3
- ubuntu/perl 5.30.0-9ubuntu0.3
- ubuntu/pinentry-curses 1.1.0-3build1
- ubuntu/pkg-config 0.29.1-0ubuntu4
- ubuntu/preview-latex-style 11.91-2ubuntu2
- ubuntu/procps 2:3.3.16-1ubuntu2.3
- ubuntu/psmisc 23.3-1
- ubuntu/pwgen 2.08-2
- ubuntu/python-pip-whl 20.0.2-5ubuntu1.9
- ubuntu/python-pkg-resources 44.0.0-2ubuntu0.1
- ubuntu/python-setuptools 44.0.0-2ubuntu0.1
- ubuntu/python2-minimal 2.7.17-2ubuntu4
- ubuntu/python2.7-minimal 2.7.18-1~20.04.3
- ubuntu/python2.7 2.7.18-1~20.04.3
- ubuntu/python2 2.7.17-2ubuntu4
- ubuntu/python3-dev 3.8.2-0ubuntu2
- ubuntu/python3-distutils 3.8.10-0ubuntu1~20.04
- ubuntu/python3-lib2to3 3.8.10-0ubuntu1~20.04
- ubuntu/python3-minimal 3.8.2-0ubuntu2
- ubuntu/python3-pip 20.0.2-5ubuntu1.9
- ubuntu/python3-pkg-resources 45.2.0-1ubuntu0.1
- ubuntu/python3-pygments 2.3.1 dfsg-1ubuntu2.2
- ubuntu/python3-setuptools 45.2.0-1ubuntu0.1
- ubuntu/python3-wheel 0.34.2-1ubuntu0.1
- ubuntu/python3-yaml 5.3.1-1ubuntu0.1
- ubuntu/python3.8-dev 3.8.10-0ubuntu1~20.04.8
- ubuntu/python3.8-minimal 3.8.10-0ubuntu1~20.04.8
- ubuntu/python3.8 3.8.10-0ubuntu1~20.04.8
- ubuntu/python3 3.8.2-0ubuntu2
- ubuntu/readline-common 8.0-4
- ubuntu/rstudio-server 1.4.1106
- ubuntu/sed 4.7-1
- ubuntu/sensible-utils 0.0.12 nmu1
- ubuntu/shared-mime-info 1.15-1
- ubuntu/sudo 1.8.31-1ubuntu1.4
- ubuntu/sysvinit-utils 2.96-2.1ubuntu1
- ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.3
- ubuntu/tcl8.6 8.6.10 dfsg-1
- ubuntu/tex-common 6.13
- ubuntu/tk8.6 8.6.10-1
- ubuntu/tzdata 2022g-0ubuntu0.20.04.1
- ubuntu/ubuntu-keyring 2020.02.11.4
- ubuntu/ubuntu-mono 19.04-0ubuntu3
- ubuntu/ucf 3.0038 nmu1
- ubuntu/unixodbc-dev 2.3.6-0.1build1
- ubuntu/unzip 6.0-25ubuntu1.1
- ubuntu/util-linux 2.34-0.1ubuntu9.3
- ubuntu/uuid-dev 2.34-0.1ubuntu9.3
- ubuntu/wget 1.20.3-1ubuntu2
- ubuntu/x11-common 1:7.7 19ubuntu14
- ubuntu/x11-utils 7.7 5
- ubuntu/x11proto-core-dev 2019.2-1ubuntu1
- ubuntu/x11proto-dev 2019.2-1ubuntu1
- ubuntu/x11proto-xext-dev 2019.2-1ubuntu1
- ubuntu/xauth 1:1.1-0ubuntu1
- ubuntu/xfonts-utils 1:7.7 6
- ubuntu/xorg-sgml-doctools 1:1.11-1
- ubuntu/xtrans-dev 1.4.0-1
- ubuntu/xz-utils 5.2.4-1ubuntu1.1
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.5
- ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5
- bash 5.0.17
- US_export_policy:US_export_policy *
- charsets:charsets *
- cldrdata:cldrdata *
- com.sun:jce 1.8.0_362
- com.sun:sunec 1.8.0_362
- com.sun:sunjce_provider 1.8.0_362
- com.sun:sunpkcs11 1.8.0_362
- dnsns:dnsns *
- dt:dt *
- icedtea-sound:icedtea-sound *
- jaccess:jaccess *
- jconsole:jconsole *
- jfr:jfr 1.8.0_362
- jsse:jsse 1.8.0_362
- local_policy:local_policy *
- localedata:localedata *
- management-agent:management-agent *
- nashorn:nashorn 1.8.0_362-8u372-ga~us1-0ubuntu1~20.04-b09
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.debian.security.UpdateCertificates:ca-certificates-java *
- resources:resources 1.8.0_362
- rt:rt 1.8.0_362
- sa-jdi:sa-jdi *
- tools:tools *
- zipfs:zipfs 1.8.0_362
- bootstrap-accessibility-plugin 1.0.6
- bootstrap-colorpicker 3.4.0
- bootstrap-sass 3.4.1
- bootstrap 4.6.0
- bootstrap 5.2.2
- bootswatch 3.4.1
- bootswatch 4.6.0
- bootswatch 5.2.2
- core-js-bundle 3.6.5