matzieb/shiny-4.0.3-seurat4-spatial : latest

Latest release: about 2 years ago - 19 downloads - 1,061 dependencies

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Dependencies

pkgconfig 2.0.3
pkgload 1.3.2.1
plogr 0.2.0
plotly 4.10.2
plotrix 3.8-2
plyr 1.8.8
png 0.1-8
polyclip 1.10-4
praise 1.0.0
preprocessCore 1.52.1
prettyunits 1.1.1
processx 3.8.2
prodlim 2023.03.31
profvis 0.3.8
progressr 0.13.0
promises 1.1.1
proxy 0.4-27
ps 1.7.5
psych 2.3.6
psychTools 2.3.6
purrr 1.0.1
quadprog 1.5-8
quantreg 5.95
rappdirs 0.3.3
rbibutils 2.2.13
rcmdcheck 1.4.0
readbitmap 0.1.5
recipes 1.0.6
rematch2 2.1.2
remotes 2.4.2
reshape2 1.4.4
reticulate 1.30
rex 1.2.1
rhdf5 2.34.0
rhdf5filters 1.2.1
rjson 0.2.21
rlang 1.1.1
rmarkdown 2.6
roxygen2 7.2.3
rpart 4.1-15
rprojroot 2.0.3
rstudioapi 0.15.0
rsvd 1.0.5
rversions 2.1.2
rvest 1.0.3
sandwich 3.0-2
sass 0.4.7
scales 1.2.1
scattermore 1.2
sctransform 0.3.5
segmented 1.6-4
selectr 0.4-2
sessioninfo 1.2.2
shape 1.4.6
shiny 1.6.0
sitmo 2.0.2
slam 0.1-50
sn 2.1.1
snow 0.4-4
sourcetools 0.1.7
sp 2.0-0
spam 2.9-1
spatial 7.3-12
spatstat.data 3.0-1
spatstat.explore 3.2-1
spatstat.geom 3.2-2
spatstat.random 3.1-5
spatstat.sparse 3.0-2
spatstat.utils 3.0-3
spelling 2.2.1
splines 4.0.3
stats4 4.0.3
stats 4.0.3
stringi 1.5.3
stringr 1.5.0
survival 3.2-7
sys 3.4.2
systemfonts 1.0.4
tcltk 4.0.3
tensor 1.5
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testit 0.13
testthat 3.1.10
tibble 3.2.1
tidyr 1.3.0
tidyselect 1.2.0
tiff 0.1-11
timeDate 4022.108
timechange 0.2.0
tinytest 1.4.1
tinytex 0.29
tools 4.0.3
translations 4.0.3
tzdb 0.4.0
urlchecker 1.0.1
usethis 2.2.2
utf8 1.2.3
utils 4.0.3
uwot 0.1.16
vctrs 0.6.3
vegan 2.6-4
vipor 0.4.5
viridis 0.6.3
viridisLite 0.4.2
waldo 0.5.1
whisker 0.4.1
withr 2.5.0
xfun 0.21
xml2 1.3.5
xopen 1.0.0
xtable 1.8-4
yaml 2.2.1
zip 2.3.0
zlibbioc 1.36.0
zoo 1.8-12
@PKGNAME@ @VERSION@
AnnotationDbi 1.52.0
BH 1.75.0-0
Biobase 2.50.0
BiocGenerics 0.36.1
BiocManager 1.30.10
BiocParallel 1.24.1
BiocVersion 3.12.0
Cairo 1.6-0
DBI 1.1.3
DBItest 1.7.3
DESeq2 1.30.1
DT 0.28
DelayedArray 0.16.3
FNN 1.1.3.2
GPArotation 2023.3-1
GenomeInfoDb 1.26.7
GenomeInfoDbData 1.2.4
GenomicRanges 1.42.0
IRanges 2.24.1
KernSmooth 2.23-17
MASS 7.3-53
Matrix 1.2-18
Matrix 1.6-0
MatrixGenerics 1.2.1
MatrixModels 0.5-2
ModelMetrics 1.2.2.2
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.0
RANN 2.6.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
ROCR 1.0-11
RSQLite 2.3.1
RUnit 0.4.32
Rcpp 1.0.11
RcppAnnoy 0.0.21
RcppArmadillo 0.12.4.1.0
RcppEigen 0.3.3.9.3
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.2.2
Rcsdp 0.1.57.5
Rdpack 2.4
RdpackTester 1.0
Rhdf5lib 1.12.1
Rtsne 0.16
S4Vectors 0.28.1
SQUAREM 2021.1
Seurat 4.3.0.1
SeuratObject 4.1.3
SparseM 1.81
SummarizedExperiment 1.20.0
TFisher 0.2.0
TH.data 1.1-2
VGAM 1.1-8
WriteXLS 6.4.0
XML 3.99-0.14
XVector 0.30.0
abind 1.4-5
annotate 1.68.0
ape 5.7-1
askpass 1.1
base64enc 0.1-3
base 4.0.3
beeswarm 0.4.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
bmp 0.3
boot 1.3-25
brew 1.0-8
brio 1.1.3
bslib 0.5.0
caTools 1.18.2
cachem 1.0.3
callr 3.7.3
caret 6.0-94
class 7.3-17
cli 3.6.1
clipr 0.8.0
clock 0.7.0
cluster 2.1.0
coda 0.19-4
codetools 0.2-16
colorspace 2.1-0
commonmark 1.7
compiler 4.0.3
covr 3.6.2
cowplot 1.1.1
cpp11 0.4.4
crayon 1.4.1
credentials 1.3.2
crosstalk 1.2.0
curl 5.0.1
data.table 1.14.8
datasets 4.0.3
deldir 1.0-9
desc 1.4.2
diagram 1.6.5
diffobj 0.3.5
digest 0.6.27
doSNOW 1.0.20
docopt 0.7.1
dotCall64 1.0-2
downlit 0.4.3
dplyr 1.1.2
dqrng 0.3.0
e1071 1.7-13
edgeR 3.32.1
ellipsis 0.3.2
enrichR 3.2
evaluate 0.14
fansi 1.0.4
farver 2.1.1
fastmap 1.1.0
fields 14.1
fitdistrplus 1.1-11
foreach 1.5.2
foreign 0.8-80
formatR 1.14
fs 1.6.2
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.11.0
future 1.33.0
genefilter 1.72.1
geneplotter 1.68.0
generics 0.1.3
gert 1.9.2
ggbeeswarm 0.7.2
ggplot2 3.4.2
ggrepel 0.9.3
ggridges 0.5.4
gh 1.4.0
gitcreds 0.1.2
globals 0.16.2
glue 1.6.2
goftest 1.2-3
gower 1.0.1
gplots 3.1.3
grDevices 4.0.3
graphics 4.0.3
graphsim 1.0.3
grid 4.0.3
gridExtra 2.3
gtable 0.3.3
gtools 3.9.4
hardhat 1.3.0
hdf5r 1.3.8
here 1.0.1
highr 0.8
hms 1.1.3
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.5.5
httr2 0.2.3
httr 1.4.6
hunspell 3.0.2
ica 1.0-3
igraph 1.5.0
ini 0.3.1
inline 0.3.19
ipred 0.9-14
irlba 2.3.5.1
isoband 0.2.7
iterators 1.0.14
jpeg 0.1-10
jquerylib 0.1.3
jsonlite 1.7.2
kernlab 0.9-32
knitr 1.31
labeling 0.4.2
lambda.r 1.2.4
later 1.1.0.1
lattice 0.20-41
lava 1.7.2.1
lavaan 0.6-15
lazyeval 0.2.2
leiden 0.4.3
lifecycle 1.0.3
limma 3.46.0
listenv 0.9.0
littler 0.3.12
lmtest 0.9-40
locfit 1.5-9.4
lubridate 1.9.2
magrittr 2.0.1
maps 3.4.1
markdown 1.1
mathjaxr 1.6-0
matrixStats 1.0.0
matrixcalc 1.0-6
memoise 2.0.1
methods 4.0.3
mgcv 1.8-33
microbenchmark 1.4.10
mime 0.9
miniUI 0.1.1.1
minqa 1.2.5
mixtools 2.0.0
mlbench 2.1-3.1
mnormt 2.1.1
multcomp 1.4-25
multinet 4.1.2
munsell 0.5.0
mvtnorm 1.2-2
mvtnormAPI 1.0-0
nlme 3.1-149
nnet 7.3-14
numDeriv 2016.8-1.1
openssl 2.1.0
org.testing.db 0.1
pROC 1.18.4
palmerpenguins 0.1.1
parallel 4.0.3
parallelly 1.36.0
patchwork 1.1.2
pbapply 1.7-2
pbivnorm 0.6.0
permute 0.9-7
pillar 1.9.0
pixmap 0.4-12
pkgKitten 0.2.3
pkgbuild 1.4.2

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ubuntu/libstdc 6 10.3.0-1ubuntu1~20.04
ubuntu/libsuitesparseconfig5 1:5.7.1 dfsg-2
ubuntu/libsystemd0 245.4-4ubuntu3.19
ubuntu/libsz2 1.0.4-1
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ubuntu/libvulkan1 1.2.131.2-1
ubuntu/libwebp6 0.6.1-2ubuntu0.20.04.1
ubuntu/libwind0-heimdal 7.7.0 dfsg-1ubuntu1.4
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ubuntu/libx11-data 2:1.6.9-2ubuntu1.2
ubuntu/libx11-dev 2:1.6.9-2ubuntu1.2
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ubuntu/libxml2 2.9.10 dfsg-5ubuntu0.20.04.6
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ubuntu/locales 2.31-0ubuntu9.9
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ubuntu/procps 2:3.3.16-1ubuntu2.3
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ubuntu/python3-apt 2.0.1ubuntu0.20.04.1
ubuntu/python3-chardet 3.0.4-4build1
ubuntu/python3-debian 0.1.36ubuntu1
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ubuntu/python3-lib2to3 3.8.10-0ubuntu1~20.04
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ubuntu/python3-pkg-resources 45.2.0-1ubuntu0.1
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ubuntu/python3.8 3.8.10-0ubuntu1~20.04.6
ubuntu/python3 3.8.2-0ubuntu2
ubuntu/readline-common 8.0-4
ubuntu/sed 4.7-1
ubuntu/sensible-utils 0.0.12 nmu1
ubuntu/shiny-server 1.5.21.1004
ubuntu/sudo 1.8.31-1ubuntu1.4
ubuntu/sysvinit-utils 2.96-2.1ubuntu1
ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.3
ubuntu/tcl8.6 8.6.10 dfsg-1
ubuntu/tex-common 6.13
ubuntu/tk8.6 8.6.10-1
ubuntu/tzdata 2022g-0ubuntu0.20.04.1
ubuntu/ubuntu-keyring 2020.02.11.4
ubuntu/ucf 3.0038 nmu1
ubuntu/unzip 6.0-25ubuntu1.1
ubuntu/util-linux 2.34-0.1ubuntu9.3
ubuntu/uuid-dev 2.34-0.1ubuntu9.3
ubuntu/wget 1.20.3-1ubuntu2
ubuntu/x11-common 1:7.7 19ubuntu14
ubuntu/x11proto-core-dev 2019.2-1ubuntu1
ubuntu/x11proto-dev 2019.2-1ubuntu1
ubuntu/x11proto-xext-dev 2019.2-1ubuntu1
ubuntu/xfonts-utils 1:7.7 6
ubuntu/xorg-sgml-doctools 1:1.11-1
ubuntu/xtail 2.1-6
ubuntu/xtrans-dev 1.4.0-1
ubuntu/zip 3.0-11build1
ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.5
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5

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