Ecosyste.ms: Docker
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jafoltz/sc_python : 8
Latest release: over 1 year ago - 63 downloads - 438 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.56.2
- BH 1.78.0-0
- Biobase 2.54.0
- BiocGenerics 0.40.0
- BiocManager 1.30.19
- BiocNeighbors 1.12.0
- BiocParallel 1.28.3
- BiocSingular 1.10.0
- BiocVersion 3.14.0
- Biostrings 2.62.0
- Cairo 1.6-0
- CytoTRACE 0.3.3
- DBI 1.1.3
- DEoptimR 1.0-11
- DelayedArray 0.20.0
- DelayedMatrixStats 1.16.0
- FNN 1.1.3.1
- GenomeInfoDb 1.30.1
- GenomeInfoDbData 1.2.7
- GenomicRanges 1.46.1
- HDF5Array 1.22.1
- HiClimR 2.2.1
- IRanges 2.28.0
- KEGGREST 1.34.0
- KernSmooth 2.23-20
- MASS 7.3-55
- Matrix 1.4-0
- Matrix 1.5-3
- MatrixGenerics 1.6.0
- MatrixModels 0.5-1
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.9
- ROCR 1.0-11
- RSQLite 2.2.19
- Rcpp 1.0.9
- RcppAnnoy 0.0.20
- RcppArmadillo 0.11.4.2.1
- RcppEigen 0.3.3.9.3
- RcppHNSW 0.4.1
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.1.7
- ResidualMatrix 1.4.0
- Rhdf5lib 1.16.0
- RhpcBLASctl 0.21-247.1
- Rtsne 0.16
- S4Vectors 0.32.4
- ScaledMatrix 1.2.0
- Seurat 4.3.0
- SeuratObject 4.1.3
- SeuratWrappers 0.3.1
- SingleCellExperiment 1.16.0
- SparseM 1.81
- SummarizedExperiment 1.24.0
- XML 3.99-0.13
- XVector 0.34.0
- abind 1.4-5
- annotate 1.72.0
- askpass 1.1
- assertthat 0.2.1
- backports 1.4.1
- base64enc 0.1-3
- base 4.1.3
- batchelor 1.10.0
- beachmat 2.10.0
- beachtest 1.0.0
- beeswarm 0.4.0
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.3
- boot 1.3-28
- brew 1.0-8
- brio 1.1.3
- broom 1.0.1
- bslib 0.4.1
- caTools 1.18.2
- cachem 1.0.6
- callr 3.7.3
- car 3.1-1
- carData 3.0-5
- ccaPP 0.3.3
- class 7.3-20
- classInt 0.4-8
- cli 3.4.1
- clipr 0.8.0
- cluster 2.1.2
- codetools 0.2-18
- colorspace 2.0-3
- commonmark 1.8.1
- compiler 4.1.3
- corrplot 0.92
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.0
- curl 4.3.3
- data.table 1.14.6
- datasets 4.1.3
- deldir 1.0-6
- desc 1.4.2
- devtools 2.4.5
- diffobj 0.3.5
- digest 0.6.30
- docopt 0.7.1
- downlit 0.4.2
- dplyr 1.0.10
- dqrng 0.3.0
- e1071 1.7-12
- edgeR 3.36.0
- egg 0.4.5
- ellipsis 0.3.2
- evaluate 0.18
- fansi 1.0.3
- farver 2.1.1
- fastmap 1.1.0
- fitdistrplus 1.1-8
- fontawesome 0.4.0
- foreign 0.8-82
- formatR 1.12
- fs 1.5.2
- furrr 0.3.1
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.10.0
- future 1.29.0
- genefilter 1.76.0
- generics 0.1.3
- gert 1.9.2
- ggbeeswarm 0.6.0
- ggplot2 3.4.0
- ggpubr 0.5.0
- ggrastr 1.0.1
- ggrepel 0.9.2
- ggridges 0.5.4
- ggsci 2.9
- ggsignif 0.6.4
- gh 1.3.1
- gitcreds 0.1.2
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- gplots 3.1.3
- grDevices 4.1.3
- graphics 4.1.3
- grid 4.1.3
- gridExtra 2.3
- grr 0.9.5
- gtable 0.3.1
- gtools 3.9.4
- here 1.0.1
- highr 0.9
- htmltools 0.5.3
- htmlwidgets 1.5.4
- httpuv 1.6.6
- httr 1.4.4
- ica 1.0-3
- igraph 1.3.5
- ini 0.3.1
- irlba 2.3.5.1
- isoband 0.2.6
- jquerylib 0.1.4
- jsonlite 1.8.4
- knitr 1.41
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- lazyeval 0.2.2
- leiden 0.4.3
- leidenbase 0.1.9
- lifecycle 1.0.3
- limma 3.50.3
- listenv 0.8.0
- littler 0.3.15
- lme4 1.1-31
- lmtest 0.9-40
- locfit 1.5-9.6
- magrittr 2.0.3
- matrixStats 0.63.0
- memoise 2.0.1
- methods 4.1.3
- mgcv 1.8-39
- mime 0.12
- miniUI 0.1.1.1
- minqa 1.2.5
- monocle3 1.3.1
- morebeach 1.0.0
- morebeachtests 1.0.0
- munsell 0.5.0
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- ncdf4 1.20
- nlme 3.1-155
- nloptr 2.0.3
- nnet 7.3-17
- nnls 1.4
- numDeriv 2016.8-1.1
- openssl 2.0.5
- org.testing.db 0.1
- parallel 4.1.3
- parallelly 1.32.1
- patchwork 1.1.2
- pbapply 1.6-0
- pbkrtest 0.5.1
- pbmcapply 1.5.1
- pcaPP 2.0-3
- pheatmap 1.0.12
- pillar 1.8.1
- pkgbuild 1.4.0
- pkgconfig 2.0.3
- pkgdown 2.0.6
- pkgload 1.3.2
- plogr 0.2.0
- plotly 4.10.1
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- polynom 1.4-1
- praise 1.0.0
- prettyunits 1.1.1
- processx 3.8.0
- profvis 0.3.7
- progressr 0.11.0
- promises 1.2.0.1
- proxy 0.4-27
- ps 1.7.2
- pscl 1.5.5
- purrr 0.3.5
- quantreg 5.94
- ragg 1.2.4
- rappdirs 0.3.3
- rcmdcheck 1.4.0
- rematch2 2.1.2
- remotes 2.4.2
- reshape2 1.4.4
- reticulate 1.26
- rhdf5 2.38.1
- rhdf5filters 1.6.0
- rlang 1.0.6
- rmarkdown 2.18
- robustbase 0.95-0
- roxygen2 7.2.2
- rpart 4.1.16
- rprojroot 2.0.3
- rsample 1.1.0
- rstatix 0.7.1
- rstudioapi 0.14
- rsvd 1.0.5
- rversions 2.1.2
- s2 1.1.1
- sass 0.4.4
- scales 1.2.1
- scattermore 0.8
- sctransform 0.3.5
- scuttle 1.4.0
- sessioninfo 1.2.2
- sf 1.0-9
- shiny 1.7.3
- sitmo 2.0.2
- slam 0.1-50
- slider 0.3.0
- snow 0.4-4
- sourcetools 0.1.7
- sp 1.5-1
- spData 2.2.1
- sparseMatrixStats 1.6.0
- spatial 7.3-15
- spatstat.data 3.0-0
- spatstat.explore 3.0-5
- spatstat.geom 3.0-3
- spatstat.random 3.0-1
- spatstat.sparse 3.0-0
- spatstat.utils 3.0-1
- spdep 1.2-7
- speedglm 0.3-4
- splines 4.1.3
- stats4 4.1.3
- stats 4.1.3
- stringi 1.7.8
- stringr 1.5.0
- survival 3.2-13
- sva 3.42.0
- sys 3.4.1
- systemfonts 1.0.4
- tcltk 4.1.3
- tensor 1.5
- terra 1.6-47
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.5
- textshaping 0.3.6
- tibble 3.1.8
- tidyr 1.2.1
- tidyselect 1.2.0
- tinytex 0.42
- tools 4.1.3
- translations 4.1.3
- units 0.8-0
- urlchecker 1.0.1
- usethis 2.1.6
- utf8 1.2.2
- utils 4.1.3
- uwot 0.1.14
- vctrs 0.5.1
- vipor 0.4.5
- viridis 0.6.2
- viridisLite 0.4.1
- waldo 0.4.0
- warp 0.2.0
- whisker 0.4.1
- withr 2.5.0
- wk 0.7.0
- xfun 0.35
- xml2 1.3.3
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.3.6
- zip 2.2.2
- zlibbioc 1.40.0
- zoo 1.8-11
- bootstrap-accessibility-plugin 1.0.6
- bootstrap-colorpicker 3.4.0
- bootstrap-sass 3.4.1
- bootstrap 4.6.0
- bootstrap 5.1.3
- bootswatch 3.4.1
- bootswatch 4.6.0
- bootswatch 5.1.3
- Cython 0.29.33
- Jinja2 3.0.3
- MarkupSafe 2.1.2
- POT 0.8.2
- PhenoGraph 1.5.7
- Pillow 9.3.0
- PyGObject 3.36.0
- anndata 0.8.0
- annoy 1.17.1
- argparse 1.2.1
- backports.zoneinfo 0.2.1
- blosc2 2.0.0
- cellrank 1.5.2.dev167 g6dac53bc
- certifi 2019.11.28
- chardet 3.0.4
- click 8.1.3
- cmake 3.25.2
- contourpy 1.0.6
- cycler 0.11.0
- dbus-python 1.2.16
- docrep 0.3.2
- fa2 0.3.5
- fbpca 1.0
- fcsparser 0.2.4
- fonttools 4.38.0
- geosketch 1.2
- h5py 3.8.0
- harmonyTS 0.1.4
- harmonypy 0.0.9
- idna 2.8
- igraph 0.10.4
- importlib-metadata 6.0.0
- intervaltree 2.1.0
- joblib 1.2.0
- kiwisolver 1.4.4
- leidenalg 0.9.1
- llvmlite 0.39.1
- loompy 3.0.7
- matplotlib 3.6.2
- msgpack 1.0.4
- natsort 8.2.0
- networkx 3.0
- numba 0.56.4
- numexpr 2.8.4
- numpy-groupies 0.9.20
- numpy 1.24.2
- packaging 21.3
- palantir 1.0.1
- pandas 1.5.3
- patsy 0.5.3
- pip 20.0.2
- progressbar2 4.2.0
- psutil 5.9.4
- py-cpuinfo 9.0.0
- pygam 0.9.0
- pygpcca 1.0.4
- pynndescent 0.5.8
- pyparsing 3.0.9
- python-apt 2.0.0 ubuntu0.20.4.7
- python-dateutil 2.8.2
- python-igraph 0.10.4
- python-utils 3.5.2
- pytz-deprecation-shim 0.1.0.post0
- pytz 2022.7.1
- requests-unixsocket 0.2.0
- requests 2.22.0
- scanoramaCT 1.2.0
- scanpy 1.9.2
- scikit-learn 1.2.0rc1
- scipy 1.10.1
- scvelo 0.2.5
- seaborn 0.12.2
- session-info 1.0.0
- setuptools 45.2.0
- six 1.14.0
- sklearn 0.0.post1
- sortedcontainers 2.4.0
- statsmodels 0.13.5
- stdlib-list 0.8.0
- tables 3.8.0
- texttable 1.6.7
- threadpoolctl 3.1.0
- tqdm 4.64.1
- typing_extensions 4.5.0
- tzdata 2022.7
- tzlocal 4.2
- umap-learn 0.5.3
- urllib3 1.25.8
- wheel 0.34.2
- wot 1.0.8.post3.dev8 gca5e94f
- wrapt 1.15.0
- wsgiref 0.1.2
- zipp 3.14.0