Ecosyste.ms: Docker

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gongx030/ensemblemerge : latest

Docker image for running ensemblemerge package.

Debian GNU/Linux 11 (bullseye)

Latest release: almost 2 years ago - 18 downloads - 546 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
BH 1.78.0-0
Biobase 2.58.0
BiocGenerics 0.44.0
BiocIO 1.8.0
BiocNeighbors 1.16.0
BiocParallel 1.32.0
BiocSingular 1.14.0
Biostrings 2.66.0
Cairo 1.6-0
ComplexHeatmap 2.14.0
DBI 1.1.3
DEoptimR 1.0-11
DelayedArray 0.24.0
DelayedMatrixStats 1.20.0
FNN 1.1.3.1
Formula 1.2-4
GenomeInfoDb 1.34.1
GenomeInfoDbData 1.2.9
GenomicAlignments 1.34.0
GenomicRanges 1.50.0
GetoptLong 1.0.5
GlobalOptions 0.1.2
HDF5Array 1.26.0
Hmisc 4.7-2
IRanges 2.32.0
KernSmooth 2.23-20
LoomExperiment 1.16.0
MASS 7.3-58.1
MCMCprecision 0.4.0
Matrix.utils 0.9.8
Matrix 1.5-3
MatrixGenerics 1.10.0
R6 2.5.1
RANN.L1 2.5.2
RANN 2.6.1
RColorBrewer 1.1-3
RCurl 1.98-1.9
RMTstat 0.3.1
ROCR 1.0-11
RSpectra 0.16-1
Rcpp 1.0.9
RcppAnnoy 0.0.20
RcppArmadillo 0.11.4.2.1
RcppEigen 0.3.3.9.3
RcppHNSW 0.4.1
RcppML 0.3.7
RcppParallel 5.1.5
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.1.7
ResidualMatrix 1.8.0
Rhdf5lib 1.20.0
RhpcBLASctl 0.21-247.1
Rhtslib 2.0.0
Rsamtools 2.14.0
Rtsne 0.16
S4Vectors 0.36.0
SC3 1.26.0
SCINA 1.2.0
SIMLR 1.24.0
ScaledMatrix 1.6.0
Seurat 4.3.0
SeuratObject 4.1.3
SingleCellExperiment 1.20.0
SoupX 1.6.2
SummarizedExperiment 1.28.0
WriteXLS 6.4.0
XML 3.99-0.13
XVector 0.38.0
abind 1.4-5
acepack 1.4.1
askpass 1.1
assertive.base 0.0-9
assertive.files 0.0-2
assertive.numbers 0.0-2
assertive.properties 0.0-5
assertive.types 0.0-3
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.2.2
basilisk.utils 1.10.0
basilisk 1.9.12
batchelor 1.14.0
beachmat 2.14.0
beachtest 1.0.0
beeswarm 0.4.0
bibtex 0.5.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
bluster 1.8.0
boot 1.3-28.1
brio 1.1.3
bslib 0.4.2
caTools 1.18.2
cachem 1.0.6
callr 3.7.3
celda 1.14.0
checkmate 2.1.0
circlize 0.4.15
class 7.3-20
classInt 0.4-8
cli 3.5.0
clipr 0.8.0
clue 0.3-63
cluster 2.1.4
clustifyr 1.10.0
codetools 0.2-18
colorspace 2.0-3
combinat 0.0-8
commonmark 1.8.1
compiler 4.2.2
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
crosstalk 1.2.0
curl 4.3.3
data.table 1.14.6
datasets 4.2.2
dbscan 1.1-11
deldir 1.0-6
desc 1.4.2
diffobj 0.3.5
digest 0.6.31
dir.expiry 1.6.0
doParallel 1.0.17
doRNG 1.8.3
doSNOW 1.0.20
dplyr 1.0.10
dqrng 0.3.0
e1071 1.7-12
edgeR 3.40.0
ellipsis 0.3.2
enrichR 3.1
entropy 1.3.1
evaluate 0.19
fansi 1.0.3
farver 2.1.1
fastmap 1.1.0
fastmatch 1.1-3
fgsea 1.24.0
filelock 1.0.2
fitdistrplus 1.1-8
fontawesome 0.4.0
foreach 1.5.2
foreign 0.8-84
formatR 1.13
fs 1.5.2
furrr 0.3.1
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.10.0
future 1.30.0
generics 0.1.3
ggbeeswarm 0.7.1
ggplot2 3.4.0
ggrastr 1.0.1
ggrepel 0.9.2
ggridges 0.5.4
globals 0.16.2
glue 1.6.2
goftest 1.2-3
gplots 3.1.3
grDevices 4.2.2
graphics 4.2.2
grid 4.2.2
gridExtra 2.3
gridGraphics 0.5-1
grr 0.9.5
gtable 0.3.1
gtools 3.9.4
harmony 1.0
hdf5r 1.3.7
here 1.0.1
hexbin 1.28.2
highr 0.10
hms 1.1.2
htmlTable 2.4.1
htmltools 0.5.4
htmlwidgets 1.6.0
httpuv 1.6.7
httr 1.4.4
hunspell 3.0.2
ica 1.0-3
igraph 1.3.5
interp 1.1-3
irlba 2.3.5.1
isoband 0.2.7
iterators 1.0.14
jpeg 0.1-10
jquerylib 0.1.4
jsonlite 1.8.4
knitr 1.41
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-45
latticeExtra 0.6-30
lazyeval 0.2.2
leiden 0.4.3
leidenbase 0.1.3
lifecycle 1.0.3
limma 3.54.0
listenv 0.9.0
lmtest 0.9-40
lobstr 1.1.2
locfit 1.5-9.6
lsei 1.3-0
magick 2.7.3
magrittr 2.0.3
matrixStats 0.63.0
mclust 6.0.0
memoise 2.0.1
metapod 1.6.0
methods 4.2.2
mgcv 1.8-41
mime 0.12
miniUI 0.1.1.1
mnormt 2.1.1
monocle3 1.0.0
morebeach 1.0.0
morebeachtests 1.0.0
multipanelfigure 2.1.2
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-161
nnet 7.3-18
npsurv 0.5-0
openssl 2.0.5
parallel 4.2.2
parallelly 1.33.0
patchwork 1.1.2
pbapply 1.6-0
pbmcapply 1.5.1
pcaPP 2.0-3
pheatmap 1.0.12
pillar 1.8.1
pkgconfig 2.0.3
pkgload 1.3.2
pkgmaker 0.32.2
plotly 4.10.1
plyr 1.8.8
png 0.1-8
polyclip 1.10-4
pracma 2.4.2
praise 1.0.0
prettyunits 1.1.1
processx 3.8.0
progress 1.2.2
progressr 0.12.0
promises 1.2.0.1
proxy 0.4-27
pryr 0.1.5
ps 1.7.2
pscl 1.5.5
psych 2.2.9
purrr 1.0.0
ragg 1.2.4
rappdirs 0.3.3
raster 3.5-21
readr 2.1.3
registry 0.5-1
rematch2 2.1.2
reshape2 1.4.4
restfulr 0.0.15
reticulate 1.26
rgeos 0.6-1
rhdf5 2.42.0
rhdf5filters 1.10.0
riverplot 0.10
rjson 0.2.21
rlang 1.0.6
rliger 1.0.0
rmarkdown 2.19
rngtools 1.5.2
robustbase 0.95-0
rpart 4.1.19
rprojroot 2.0.3
rrcov 1.7-2
rsample 1.1.1
rstudioapi 0.14
rsvd 1.0.5
rtracklayer 1.58.0
s2 1.1.1
sass 0.4.4
scDblFinder 1.12.0
scales 1.2.1
scater 1.26.0
scattermore 0.8
sceasy 0.0.7
scran 1.26.0
sctransform 0.3.5
scuttle 1.8.0
sf 1.0-7
shape 1.4.6
shiny 1.7.4
sitmo 2.0.2
slam 0.1-50
slider 0.3.0
snow 0.4-4
son.of.basilisk 0.99.0
sourcetools 0.1.7
sp 1.5-1
spData 2.2.1
sparseMatrixStats 1.10.0
spatstat.data 3.0-0
spatstat.explore 3.0-5
spatstat.geom 3.0-3
spatstat.random 3.0-1
spatstat.sparse 3.0-0
spatstat.utils 3.0-1
spdep 1.2-7
speedglm 0.3-4
spelling 2.2
splines 4.2.2
statmod 1.4.37
stats4 4.2.2
stats 4.2.2
stringi 1.7.8
stringr 1.5.0
survival 3.4-0
sys 3.4.1
systemfonts 1.0.4
tcltk 4.2.2
tensor 1.5
terra 1.5-21
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.6
textshaping 0.3.6
tibble 3.1.8
tidyr 1.2.1
tidyselect 1.2.0
tinytex 0.43
tmvnsim 1.0-2
tools 4.2.2
translations 4.2.2
tzdb 0.3.0
units 0.8-1
utf8 1.2.2
utils 4.2.2
uwot 0.1.14
vctrs 0.5.1
vipor 0.4.5
viridis 0.6.2
viridisLite 0.4.1
vroom 1.6.0
waldo 0.4.0
warp 0.2.0
withr 2.5.0
wk 0.7.1
xfun 0.36
xgboost 1.7.1.1
xml2 1.3.3
xtable 1.8-4
yaml 2.3.6
zellkonverter 1.8.0
zlibbioc 1.44.0
zoo 1.8-11

debian/adduser 3.118
debian/apt 2.2.4
debian/base-files 11.1 deb11u5
debian/base-passwd 3.5.51
debian/bash 5.1-2 deb11u1
debian/bsdutils 1:2.36.1-8 deb11u1
debian/coreutils 8.32-4 b1
debian/dash 0.5.11 git20200708 dd9ef66-5
debian/debconf 1.5.77
debian/debian-archive-keyring 2021.1.1
debian/debianutils 4.11.2
debian/diffutils 1:3.7-5
debian/dpkg 1.20.12
debian/e2fsprogs 1.46.2-2
debian/findutils 4.8.0-1
debian/gcc-10-base 10.2.1-6
debian/gcc-9-base 9.3.0-22
debian/gpgv 2.2.27-2 deb11u2
debian/grep 3.6-1
debian/gzip 1.10-4 deb11u1
debian/hostname 3.23
debian/init-system-helpers 1.60
debian/libacl1 2.2.53-10
debian/libapt-pkg6.0 2.2.4
debian/libattr1 1:2.4.48-6
debian/libaudit-common 1:3.0-2
debian/libaudit1 1:3.0-2
debian/libblkid1 2.36.1-8 deb11u1
debian/libbz2-1.0 1.0.8-4
debian/libc-bin 2.31-13 deb11u5
debian/libc6 2.31-13 deb11u5
debian/libcap-ng0 0.7.9-2.2 b1
debian/libcom-err2 1.46.2-2
debian/libcrypt1 1:4.4.18-4
debian/libdb5.3 5.3.28 dfsg1-0.8
debian/libdebconfclient0 0.260
debian/libext2fs2 1.46.2-2
debian/libffi7 3.3-6
debian/libgcc-s1 10.2.1-6
debian/libgcrypt20 1.8.7-6
debian/libgmp10 2:6.2.1 dfsg-1 deb11u1
debian/libgnutls30 3.7.1-5 deb11u2
debian/libgpg-error0 1.38-2
debian/libgssapi-krb5-2 1.18.3-6 deb11u2
debian/libhogweed6 3.7.3-1
debian/libidn2-0 2.3.0-5
debian/libk5crypto3 1.18.3-6 deb11u2
debian/libkeyutils1 1.6.1-2
debian/libkrb5-3 1.18.3-6 deb11u2
debian/libkrb5support0 1.18.3-6 deb11u2
debian/liblz4-1 1.9.3-2
debian/liblzma5 5.2.5-2.1~deb11u1
debian/libmount1 2.36.1-8 deb11u1
debian/libnettle8 3.7.3-1
debian/libnsl2 1.3.0-2
debian/libp11-kit0 0.23.22-1
debian/libpam-modules-bin 1.4.0-9 deb11u1
debian/libpam-modules 1.4.0-9 deb11u1
debian/libpam-runtime 1.4.0-9 deb11u1
debian/libpam0g 1.4.0-9 deb11u1
debian/libpcre2-8-0 10.36-2 deb11u1
debian/libpcre3 2:8.39-13
debian/libseccomp2 2.5.1-1 deb11u1
debian/libselinux1 3.1-3
debian/libsemanage-common 3.1-1
debian/libsemanage1 3.1-1 b2
debian/libsepol1 3.1-1
debian/libsmartcols1 2.36.1-8 deb11u1
debian/libss2 1.46.2-2
debian/libssl1.1 1.1.1n-0 deb11u3
debian/libstdc 6 10.2.1-6
debian/libsystemd0 247.3-7 deb11u1
debian/libtasn1-6 4.16.0-2
debian/libtinfo6 6.2 20201114-2
debian/libtirpc-common 1.3.1-1 deb11u1
debian/libtirpc3 1.3.1-1 deb11u1
debian/libudev1 247.3-7 deb11u1
debian/libunistring2 0.9.10-4
debian/libuuid1 2.36.1-8 deb11u1
debian/libxxhash0 0.8.0-2
debian/libzstd1 1.4.8 dfsg-2.1
debian/login 1:4.8.1-1
debian/logsave 1.46.2-2
debian/lsb-base 11.1.0
debian/mawk 1.3.4.20200120-2
debian/mount 2.36.1-8 deb11u1
debian/ncurses-base 6.2 20201114-2
debian/ncurses-bin 6.2 20201114-2
debian/passwd 1:4.8.1-1
debian/perl-base 5.32.1-4 deb11u2
debian/sed 4.7-1
debian/sysvinit-utils 2.96-7 deb11u1
debian/tar 1.34 dfsg-1
debian/tzdata 2021a-1 deb11u8
debian/util-linux 2.36.1-8 deb11u1
debian/zlib1g 1:1.2.11.dfsg-2 deb11u2

java 17.0.3-internal 0-adhoc..src
postgresql 15.1
python 3.7.12

gradle-wrapper:gradle-wrapper 2.10
jrt-fs:jrt-fs 17.0.3-internal

@grpc/grpc-js 1.1.8
@grpc/proto-loader 0.5.5
@jupyter-widgets/jupyterlab-manager 5.0.5
@protobufjs/aspromise 1.1.2
@protobufjs/base64 1.1.2
@protobufjs/codegen 2.0.4
@protobufjs/eventemitter 1.1.0
@protobufjs/fetch 1.1.0
@protobufjs/float 1.0.2
@protobufjs/inquire 1.1.0
@protobufjs/path 1.1.2
@protobufjs/pool 1.1.0
@protobufjs/utf8 1.1.0
@types/long 4.0.1
@types/node 12.19.3
abort-controller 3.0.0
agent-base 6.0.2
ansi-styles 4.3.0
arrify 2.0.1
async 1.5.2
base64-js 1.3.1
bignumber.js 9.0.1
bootstrap-accessibility-plugin 1.0.6
bootstrap-colorpicker 3.4.0
bootstrap-sass 3.4.1
bootstrap 4.6.0
bootstrap 5.2.2
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.2.2
buffer-equal-constant-time 1.0.1
color-convert 2.0.1
color-name 1.1.4
decamelize 1.2.0
ecdsa-sig-formatter 1.0.11
emoji-regex 8.0.0
event-target-shim 5.0.1
extend 3.0.2
fast-text-encoding 1.0.3
find-up 4.1.0
gaxios 4.0.1
gcp-metadata 4.2.1
get-caller-file 2.0.5
google-auth-library 6.1.3
google-p12-pem 3.0.3
google-protobuf 3.13.0
grpc-examples-xds 0.1.0
grpc-examples 0.1.0
gtoken 5.0.5
https-proxy-agent 5.0.0
is-stream 2.0.0
js 1.0.0
json-bigint 1.0.0
jwa 2.0.0
jws 4.0.0
locate-path 5.0.0
lodash.camelcase 4.3.0
lodash 4.17.20
long 4.0.0
lru-cache 6.0.0
mime 2.4.6
minimist 1.2.5
ms 2.1.2
node-fetch 2.6.1
node-forge 0.10.0
p-limit 2.3.0
p-locate 4.1.0
p-try 2.2.0
path-exists 4.0.0
protobufjs 6.10.1
require-directory 2.1.1
require-main-filename 2.0.0
safe-buffer 5.1.2
set-blocking 2.0.0
which-module 2.0.0
y18n 4.0.3
yargs-parser 18.1.3