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alexthiery/archr_macs2_seurat : 3.0
Ubuntu 20.04.5 LTS
Latest release: about 1 year ago - 14 downloads - 801 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.56.2
- ArchR 1.0.2
- BH 1.81.0-1
- BSgenome.Ggallus.UCSC.galGal6 1.4.2
- BSgenome 1.62.0
- Biobase 2.54.0
- BiocFileCache 2.2.1
- BiocGenerics 0.40.0
- BiocIO 1.4.0
- BiocManager 1.30.20
- BiocParallel 1.28.3
- BiocVersion 3.14.0
- Biostrings 2.62.0
- CNEr 1.30.0
- Cairo 1.6-0
- ComplexHeatmap 2.10.0
- DBI 1.1.3
- DT 0.27
- DelayedArray 0.20.0
- DirichletMultinomial 1.36.0
- FNN 1.1.3.2
- GO.db 3.14.0
- GenomeInfoDb 1.30.1
- GenomeInfoDbData 1.2.7
- GenomicAlignments 1.30.0
- GenomicFeatures 1.46.5
- GenomicRanges 1.46.1
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- IRanges 2.28.0
- KEGGREST 1.34.0
- KernSmooth 2.23-20
- Lahman 9.0-0
- MASS 7.3-54
- Matrix 1.3-4
- Matrix 1.5-4
- MatrixGenerics 1.6.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.12
- RMariaDB 1.2.1
- ROCR 1.0-11
- RPostgres 1.4.3
- RSQLite 2.3.1
- RSpectra 0.16-1
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.12.4.1.0
- RcppEigen 0.3.3.9.3
- RcppHNSW 0.4.1
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- Rhdf5lib 1.16.0
- Rhtslib 1.26.0
- Rsamtools 2.10.0
- Rtsne 0.16
- S4Vectors 0.32.4
- Seurat 4.9.9.9049
- SeuratObject 4.9.9.9086
- SummarizedExperiment 1.24.0
- TFBSTools 1.32.0
- TFMPvalue 0.0.9
- XML 3.99-0.14
- XVector 0.34.0
- abind 1.4-5
- annotate 1.72.0
- arrow 7.0.0
- askpass 1.1
- assertthat 0.2.1
- backports 1.4.1
- base64enc 0.1-3
- base 4.1.2
- biomaRt 2.50.3
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.4
- boot 1.3-28
- brew 1.0-7
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- broom 0.7.12
- bslib 0.5.0
- caTools 1.18.2
- cachem 1.0.8
- callr 3.7.0
- cellranger 1.1.0
- checkmate 2.1.0
- chromVAR 1.16.0
- circlize 0.4.15
- class 7.3-19
- cli 3.6.1
- clipr 0.8.0
- clue 0.3-64
- cluster 2.1.2
- clustree 0.4.4
- codetools 0.2-18
- colorspace 2.1-0
- commonmark 1.9.0
- compiler 4.1.2
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.0
- curl 5.0.1
- data.table 1.14.8
- datasets 4.1.2
- dbplyr 2.1.1
- deldir 1.0-9
- desc 1.4.1
- devtools 2.4.3
- diffobj 0.3.5
- digest 0.6.32
- doParallel 1.0.17
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- dqrng 0.3.0
- dtplyr 1.2.1
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- ellipsis 0.3.2
- evaluate 0.21
- fansi 1.0.4
- farver 2.1.1
- fastDummies 1.6.3
- fastmap 1.1.1
- filelock 1.0.2
- fitdistrplus 1.1-11
- fontawesome 0.5.1
- forcats 0.5.1
- foreach 1.5.2
- foreign 0.8-81
- formatR 1.14
- fs 1.6.2
- fst 0.9.8
- fstcore 0.9.8
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.11.0
- future 1.32.0
- gargle 1.2.0
- generics 0.1.3
- gert 1.5.0
- getopt 1.20.3
- ggforce 0.4.1
- ggplot2 3.4.2
- ggraph 2.1.0
- ggrepel 0.9.3
- ggridges 0.5.4
- gh 1.3.0
- gitcreds 0.1.1
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- googledrive 2.0.0
- googlesheets4 1.0.0
- gplots 3.1.3
- grDevices 4.1.2
- graphics 4.1.2
- graphlayouts 0.8.4
- grid 4.1.2
- gridExtra 2.3
- gtable 0.3.3
- gtools 3.9.4
- harmony 0.1.1
- haven 2.4.3
- here 1.0.1
- hexbin 1.28.2
- highr 0.10
- hms 1.1.3
- htmltools 0.5.5
- htmlwidgets 1.6.2
- httpuv 1.6.11
- httr 1.4.6
- ica 1.0-3
- ids 1.0.1
- igraph 1.5.0
- ini 0.3.1
- irlba 2.3.5.1
- isoband 0.2.7
- iterators 1.0.14
- jquerylib 0.1.4
- jsonlite 1.8.5
- knitr 1.43
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.1
- lattice 0.20-45
- lazyeval 0.2.2
- leiden 0.4.3
- lifecycle 1.0.3
- listenv 0.9.0
- littler 0.3.15
- lmtest 0.9-40
- lubridate 1.8.0
- magrittr 2.0.3
- matrixStats 1.0.0
- memoise 2.0.1
- methods 4.1.2
- mgcv 1.8-38
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- munsell 0.5.0
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- nlme 3.1-153
- nnet 7.3-16
- nycflights13 1.0.2
- openssl 2.0.6
- optparse 1.7.1
- org.Gg.eg.db 3.14.0
- org.testing.db 0.1
- parallel 4.1.2
- parallelly 1.36.0
- patchwork 1.1.2
- pbapply 1.7-2
- pheatmap 1.0.12
- pillar 1.9.0
- pkgbuild 1.3.1
- pkgconfig 2.0.3
- pkgload 1.2.4
- plogr 0.2.0
- plotly 4.10.2
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- poweRlaw 0.70.6
- pracma 2.4.2
- praise 1.0.0
- presto 1.0.0
- prettyunits 1.1.1
- processx 3.5.2
- progress 1.2.2
- progressr 0.13.0
- promises 1.2.0.1
- ps 1.6.0
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- rappdirs 0.3.3
- rcmdcheck 1.4.0
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- reticulate 1.30
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- rhdf5filters 1.6.0
- rjson 0.2.21
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- rmarkdown 2.22
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- rpart 4.1-15
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- sass 0.4.6
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- scattermore 1.2
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- selectr 0.4-2
- seqLogo 1.60.0
- sessioninfo 1.2.2
- shape 1.4.6
- shiny 1.7.4
- shinythemes 1.2.0
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- snow 0.4-4
- sourcetools 0.1.7-1
- sp 2.0-0
- spam 2.9-1
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- spatstat.explore 3.2-1
- spatstat.geom 3.2-1
- spatstat.random 3.1-5
- spatstat.sparse 3.0-2
- spatstat.utils 3.0-3
- splines 4.1.2
- stats4 4.1.2
- stats 4.1.2
- stringi 1.7.12
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- survival 3.2-13
- sys 3.4.2
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- tcltk 4.1.2
- tensor 1.5
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- github.com/evanw/esbuild (devel)
- golang.org/x/sys v0.0.0-20200501145240-bc7a7d42d5c3
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- flask 0.10.1