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alexthiery/archr : 2.0
Ubuntu 20.04.5 LTS
Latest release: over 1 year ago - 133 downloads - 819 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.56.2
- ArchR 1.0.2
- BH 1.81.0-1
- BSgenome.Ggallus.UCSC.galGal6 1.4.2
- BSgenome 1.62.0
- circlize 0.4.15
- Biobase 2.54.0
- BiocFileCache 2.2.1
- BiocGenerics 0.40.0
- BiocIO 1.4.0
- BiocManager 1.30.16
- BiocParallel 1.28.3
- BiocVersion 3.14.0
- Biostrings 2.62.0
- CNEr 1.30.0
- Cairo 1.6-0
- ComplexHeatmap 2.10.0
- DBI 1.1.3
- DT 0.27
- DelayedArray 0.20.0
- DirichletMultinomial 1.36.0
- FNN 1.1.3.2
- GO.db 3.14.0
- GenomeInfoDb 1.30.1
- GenomeInfoDbData 1.2.7
- GenomicAlignments 1.30.0
- GenomicFeatures 1.46.5
- GenomicRanges 1.46.1
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- IRanges 2.28.0
- KEGGREST 1.34.0
- KernSmooth 2.23-20
- Lahman 9.0-0
- MASS 7.3-54
- Matrix 1.3-4
- Matrix 1.5-4
- MatrixGenerics 1.6.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RANN 2.6.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.12
- RMariaDB 1.2.1
- ROCR 1.0-11
- RPostgres 1.4.3
- RSQLite 2.3.1
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.12.2.0.0
- RcppEigen 0.3.3.9.3
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- Rhdf5lib 1.16.0
- Rhtslib 1.26.0
- Rsamtools 2.10.0
- Rtsne 0.16
- S4Vectors 0.32.4
- Seurat 4.3.0
- SeuratObject 4.1.3
- SummarizedExperiment 1.24.0
- TFBSTools 1.32.0
- TFMPvalue 0.0.9
- XML 3.99-0.14
- XVector 0.34.0
- abind 1.4-5
- annotate 1.72.0
- arrow 7.0.0
- askpass 1.1
- assertthat 0.2.1
- backports 1.4.1
- base64enc 0.1-3
- base 4.1.2
- biomaRt 2.50.3
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.4
- boot 1.3-28
- brew 1.0-7
- brio 1.1.3
- broom 0.7.12
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.7
- callr 3.7.0
- cellranger 1.1.0
- checkmate 2.1.0
- chromVAR 1.16.0
- class 7.3-19
- cli 3.6.1
- clipr 0.8.0
- clue 0.3-64
- cluster 2.1.2
- clustree 0.5.0
- codetools 0.2-18
- colorspace 2.1-0
- commonmark 1.9.0
- compiler 4.1.2
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.0
- curl 5.0.0
- data.table 1.14.8
- datasets 4.1.2
- dbplyr 2.1.1
- deldir 1.0-6
- desc 1.4.1
- devtools 2.4.3
- diffobj 0.3.5
- digest 0.6.31
- doParallel 1.0.17
- docopt 0.7.1
- dplyr 1.1.2
- dqrng 0.3.0
- dtplyr 1.2.1
- duckdb 0.3.2-1
- ellipsis 0.3.2
- evaluate 0.20
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- filelock 1.0.2
- fitdistrplus 1.1-8
- fontawesome 0.5.1
- forcats 0.5.1
- foreach 1.5.2
- foreign 0.8-81
- formatR 1.14
- fs 1.6.1
- fst 0.9.8
- fstcore 0.9.8
- futile.logger 1.4.3
- futile.options 1.0.1
- future.apply 1.10.0
- future 1.32.0
- gargle 1.2.0
- generics 0.1.3
- gert 1.5.0
- getopt 1.20.3
- ggforce 0.4.1
- ggplot2 3.4.2
- ggraph 2.1.0
- ggrepel 0.9.3
- ggridges 0.5.4
- gh 1.3.0
- gitcreds 0.1.1
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- googledrive 2.0.0
- googlesheets4 1.0.0
- gplots 3.1.3
- grDevices 4.1.2
- graphics 4.1.2
- graphlayouts 0.8.4
- grid 4.1.2
- gridExtra 2.3
- gtable 0.3.3
- gtools 3.9.4
- harmony 0.1.1
- haven 2.4.3
- here 1.0.1
- hexbin 1.28.3
- highr 0.10
- hms 1.1.3
- htmltools 0.5.5
- htmlwidgets 1.6.2
- httpuv 1.6.9
- httr 1.4.5
- ica 1.0-3
- ids 1.0.1
- igraph 1.4.2
- ini 0.3.1
- irlba 2.3.5.1
- isoband 0.2.7
- iterators 1.0.14
- jquerylib 0.1.4
- jsonlite 1.8.4
- knitr 1.42
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- lazyeval 0.2.2
- leiden 0.4.3
- lifecycle 1.0.3
- listenv 0.9.0
- littler 0.3.15
- lmtest 0.9-40
- lubridate 1.8.0
- magrittr 2.0.3
- matrixStats 0.63.0
- memoise 2.0.1
- methods 4.1.2
- mgcv 1.8-38
- mime 0.12
- miniUI 0.1.1.1
- modelr 0.1.8
- motifmatchr 1.16.0
- munsell 0.5.0
- nabor 0.5.0
- nlme 3.1-153
- nnet 7.3-16
- nycflights13 1.0.2
- openssl 2.0.6
- optparse 1.7.3
- org.Gg.eg.db 3.14.0
- org.testing.db 0.1
- parallel 4.1.2
- parallelly 1.35.0
- patchwork 1.1.2
- pbapply 1.7-0
- pheatmap 1.0.12
- pillar 1.9.0
- pkgbuild 1.3.1
- pkgconfig 2.0.3
- pkgload 1.2.4
- plogr 0.2.0
- plotly 4.10.1
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- poweRlaw 0.70.6
- pracma 2.4.2
- praise 1.0.0
- presto 1.0.0
- prettyunits 1.1.1
- processx 3.5.2
- progress 1.2.2
- progressr 0.13.0
- promises 1.2.0.1
- ps 1.6.0
- purrr 1.0.1
- rappdirs 0.3.3
- rcmdcheck 1.4.0
- readr 2.1.4
- readxl 1.3.1
- rematch2 2.1.2
- rematch 1.0.1
- remotes 2.4.2
- reprex 2.0.1
- reshape2 1.4.4
- restfulr 0.0.15
- reticulate 1.28
- rhandsontable 0.3.8
- rhdf5 2.38.1
- rhdf5filters 1.6.0
- rjson 0.2.21
- rlang 1.1.0
- rmarkdown 2.21
- roxygen2 7.1.2
- rpart 4.1-15
- rprojroot 2.0.2
- rstudioapi 0.13
- rtracklayer 1.54.0
- rversions 2.1.1
- rvest 1.0.2
- sass 0.4.5
- scales 1.2.1
- scattermore 0.8
- sctransform 0.3.5
- selectr 0.4-2
- seqLogo 1.60.0
- sessioninfo 1.2.2
- shape 1.4.6
- shiny 1.7.4
- shinythemes 1.2.0
- sitmo 2.0.2
- snow 0.4-4
- sourcetools 0.1.7-1
- sp 1.6-0
- spatial 7.3-14
- spatstat.data 3.0-1
- spatstat.explore 3.1-0
- spatstat.geom 3.1-0
- spatstat.random 3.1-4
- spatstat.sparse 3.0-1
- spatstat.utils 3.0-2
- splines 4.1.2
- stats4 4.1.2
- stats 4.1.2
- stringi 1.7.12
- stringr 1.5.0
- survival 3.2-13
- sys 3.4.1
- systemfonts 1.0.4
- tcltk 4.1.2
- tensor 1.5
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.2
- tibble 3.2.1
- tidygraph 1.2.3
- tidyr 1.3.0
- tidyselect 1.2.0
- tidyverse 1.3.1
- tinytex 0.45
- tools 4.1.2
- translations 4.1.2
- tweenr 2.0.2
- tzdb 0.3.0
- usethis 2.1.5
- utf8 1.2.3
- utils 4.1.2
- uuid 1.0-3
- uwot 0.1.14
- vctrs 0.6.2
- viridis 0.6.2
- viridisLite 0.4.1
- vroom 1.6.1
- waldo 0.3.1
- whisker 0.4
- withr 2.5.0
- xfun 0.39
- xml2 1.3.3
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.3.7
- zip 2.2.0
- zlibbioc 1.40.0
- zoo 1.8-12
- ubuntu/adduser 3.118ubuntu2
- ubuntu/apt-utils 2.0.9
- ubuntu/apt 2.0.9
- ubuntu/autoconf 2.69-11.1
- ubuntu/automake 1:1.16.1-4ubuntu6
- ubuntu/autotools-dev 20180224.1
- ubuntu/base-files 11ubuntu5.6
- ubuntu/base-passwd 3.5.47
- ubuntu/bash-completion 1:2.10-1ubuntu1
- ubuntu/bash 5.0-6ubuntu1.2
- ubuntu/binutils-common 2.34-6ubuntu1.4
- ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1.4
- ubuntu/binutils 2.34-6ubuntu1.4
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.3
- ubuntu/build-essential 12.8ubuntu1.1
- ubuntu/bzip2 1.0.8-2
- ubuntu/ca-certificates-java 20190405ubuntu1
- ubuntu/ca-certificates 20211016ubuntu0.20.04.1
- ubuntu/coreutils 8.30-3ubuntu2
- ubuntu/cpp-9 9.4.0-1ubuntu1~20.04.1
- ubuntu/cpp 4:9.3.0-1ubuntu2
- ubuntu/dash 0.5.10.2-6
- ubuntu/debconf 1.5.73
- ubuntu/debianutils 4.9.1
- ubuntu/default-libmysqlclient-dev 1.0.5ubuntu2
- ubuntu/diffutils 1:3.7-3
- ubuntu/dirmngr 2.2.19-3ubuntu2.2
- ubuntu/distro-info-data 0.43ubuntu1.11
- ubuntu/dpkg-dev 1.19.7ubuntu3.2
- ubuntu/dpkg 1.19.7ubuntu3.2
- ubuntu/e2fsprogs 1.45.5-2ubuntu1.1
- ubuntu/fdisk 2.34-0.1ubuntu9.3
- ubuntu/file 1:5.38-4
- ubuntu/findutils 4.7.0-1ubuntu1
- ubuntu/fontconfig-config 2.13.1-2ubuntu3
- ubuntu/fontconfig 2.13.1-2ubuntu3
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/fonts-lmodern 2.004.5-6
- ubuntu/fonts-texgyre 20180621-3
- ubuntu/freeglut3 2.8.1-3
- ubuntu/g -9 9.4.0-1ubuntu1~20.04.1
- ubuntu/g 4:9.3.0-1ubuntu2
- ubuntu/gcc-10-base 10.3.0-1ubuntu1~20.04
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- ubuntu/gcc 4:9.3.0-1ubuntu2
- ubuntu/gfortran-9 9.4.0-1ubuntu1~20.04.1
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- ubuntu/gir1.2-glib-2.0 1.64.1-1~ubuntu20.04.1
- ubuntu/gir1.2-harfbuzz-0.0 2.6.4-1ubuntu4.2
- ubuntu/git-man 1:2.25.1-1ubuntu3.10
- ubuntu/git 1:2.25.1-1ubuntu3.10
- ubuntu/gpg-agent 2.2.19-3ubuntu2.2
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