Ecosyste.ms: Docker
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preethiilumina/diffbind : 1.2
fixed genome name
Debian GNU/Linux bookworm/sid
Latest release: 11 months ago - 155 downloads - 626 dependencies
JSONDependencies
- @PKGNAME@ @PKGVERSION@
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.60.0
- BH 1.81.0-1
- BSgenome 1.66.3
- Biobase 2.58.0
- BiocFileCache 2.6.1
- BiocGenerics 0.44.0
- BiocIO 1.8.0
- BiocManager 1.30.20
- BiocParallel 1.32.5
- BiocVersion 3.16.0
- Biostrings 2.66.0
- ChIPseeker 1.34.1
- ComplexHeatmap 2.14.0
- DBI 1.1.3
- DESeq2 1.38.3
- DOSE 3.24.2
- DT 0.27
- DelayedArray 0.24.0
- DiffBind 3.8.4
- EnrichedHeatmap 1.27.2
- GO.db 3.16.0
- GOSemSim 2.24.0
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicAlignments 1.34.0
- GenomicFeatures 1.50.4
- GenomicRanges 1.50.2
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- GreyListChIP 1.30.0
- HDO.db 0.99.1
- IRanges 2.32.0
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- Lahman 10.0-1
- MASS 7.3-58.1
- Matrix 1.5-1
- MatrixGenerics 1.10.0
- R.methodsS3 1.8.2
- R.oo 1.25.0
- R.utils 2.12.2
- R6 2.5.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.10
- RSQLite 2.3.0
- Rcpp 1.0.10
- RcppArmadillo 0.12.0.1.0
- RcppEigen 0.3.3.9.3
- RcppNumerical 0.5-0
- Rhtslib 2.0.0
- Rsamtools 2.14.0
- S4Vectors 0.36.1
- SQUAREM 2021.1
- ShortRead 1.56.1
- SummarizedExperiment 1.28.0
- TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2
- TxDb.Hsapiens.UCSC.hg38.knownGene 3.16.0
- TxDb.Mmusculus.UCSC.mm10.knownGene 3.10.0
- TxDb.Mmusculus.UCSC.mm9.knownGene 3.2.2
- XML 3.99-0.13
- XVector 0.38.0
- amap 0.8-19
- annotate 1.76.0
- ape 5.7
- apeglm 1.20.0
- aplot 0.1.9
- argparse 2.2.2
- ashr 2.2-54
- askpass 1.1
- backports 1.4.1
- base64enc 0.1-3
- base 4.2.2
- bbmle 1.0.25
- bdsmatrix 1.3-6
- bench 1.1.2
- biomaRt 2.54.0
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.3
- boot 1.3-28
- brio 1.1.3
- broom 1.0.3
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.7
- callr 3.7.3
- chipseq 1.48.0
- circlize 0.4.15
- class 7.3-20
- cli 3.6.0
- clipr 0.8.0
- clue 0.3-64
- cluster 2.1.4
- coda 0.19-4
- codetools 0.2-18
- colorspace 2.1-0
- commonmark 1.8.1
- compiler 4.2.2
- covr 3.6.1
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- crosstalk 1.2.0
- curl 5.0.0
- data.table 1.14.8
- datasets 4.2.2
- dbplyr 2.3.1
- deldir 1.0-6
- desc 1.4.2
- diffobj 0.3.5
- digest 0.6.31
- doParallel 1.0.17
- docopt 0.7.1
- downlit 0.4.2
- dplyr 1.1.0
- ellipsis 0.3.2
- emdbook 1.3.12
- enrichplot 1.18.3
- etrunct 0.1
- evaluate 0.20
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- fastmatch 1.1-3
- fgsea 1.24.0
- filelock 1.0.2
- findpython 1.0.7
- fontawesome 0.5.0
- foreach 1.5.2
- foreign 0.8-83
- formatR 1.14
- fs 1.6.1
- futile.logger 1.4.3
- futile.options 1.0.1
- geneplotter 1.76.0
- generics 0.1.3
- ggforce 0.4.1
- ggfun 0.0.9
- ggnewscale 0.4.8
- ggplot2 3.4.1
- ggplotify 0.1.0
- ggraph 2.1.0
- ggrepel 0.9.3
- ggtree 3.6.2
- gitcreds 0.1.2
- glue 1.6.2
- gplots 3.1.3
- grDevices 4.2.2
- graphics 4.2.2
- graphlayouts 0.8.4
- grid 4.2.2
- gridExtra 2.3
- gridGraphics 0.5-1
- gtable 0.3.1
- gtools 3.9.4
- highr 0.10
- hms 1.1.2
- htmltools 0.5.4
- htmlwidgets 1.6.1
- httpuv 1.6.9
- httr 1.4.5
- hwriter 1.3.2.1
- igraph 1.4.1
- ini 0.3.1
- interp 1.1-3
- invgamma 1.1
- irlba 2.3.5.1
- isoband 0.2.7
- iterators 1.0.14
- jose 1.2.0
- jpeg 0.1-10
- jquerylib 0.1.4
- jsonlite 1.8.4
- knitr 1.42
- labeling 0.4.2
- lambda.r 1.2.4
- later 1.3.0
- lattice 0.20-45
- latticeExtra 0.6-30
- lazyeval 0.2.2
- lifecycle 1.0.3
- limma 3.54.1
- littler 0.3.16
- lobstr 1.1.2
- locfit 1.5-9.7
- magrittr 2.0.3
- matrixStats 0.63.0
- memoise 2.0.1
- methods 4.2.2
- mgcv 1.8-41
- microbenchmark 1.4.9
- mime 0.12
- mixsqp 0.3-48
- munsell 0.5.0
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- nlme 3.1-160
- nnet 7.3-18
- numDeriv 2016.8-1.1
- nycflights13 1.0.2
- openssl 2.0.5
- org.Hs.eg.db 3.16.0
- org.Mm.eg.db 3.16.0
- org.testing.db 0.1
- parallel 4.2.2
- patchwork 1.1.2
- pheatmap 1.0.12
- pillar 1.8.1
- pkgconfig 2.0.3
- pkgload 1.3.2
- plogr 0.2.0
- plotrix 3.8-2
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- praise 1.0.0
- preprocessCore 1.60.2
- prettyunits 1.1.1
- processx 3.8.0
- profileplyr 1.14.1
- profmem 0.6.0
- progress 1.2.2
- promises 1.2.0.1
- ps 1.7.2
- purrr 1.0.1
- qvalue 2.30.0
- rGREAT 2.0.2
- rappdirs 0.3.3
- readr 2.1.4
- rematch2 2.1.2
- remotes 2.4.2
- reshape2 1.4.4
- restfulr 0.0.15
- rex 1.2.1
- rjson 0.2.21
- rlang 1.0.6
- rmarkdown 2.20
- rpart 4.1.19
- rprojroot 2.0.3
- rstudioapi 0.14
- rtracklayer 1.58.0
- sass 0.4.5
- scales 1.2.1
- scatterpie 0.1.8
- shadowtext 0.1.2
- shape 1.4.6
- shiny 1.7.4
- snow 0.4-4
- soGGi 1.30.0
- sodium 1.2.1
- sourcetools 0.1.7-1
- spatial 7.3-15
- splines 4.2.2
- stats4 4.2.2
- stats 4.2.2
- stringi 1.7.12
- stringr 1.5.0
- survival 3.4-0
- sys 3.4.1
- systemPipeR 2.4.0
- systemfonts 1.0.4
- tcltk 4.2.2
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.6
- tibble 3.1.8
- tidygraph 1.2.3
- tidyr 1.3.0
- tidyselect 1.2.0
- tidytree 0.4.2
- tiff 0.1-11
- tinytex 0.44
- tools 4.2.2
- translations 4.2.2
- treeio 1.22.0
- truncnorm 1.0-8
- tweenr 2.0.2
- tzdb 0.3.0
- utf8 1.2.3
- utils 4.2.2
- vctrs 0.5.2
- viridis 0.6.2
- viridisLite 0.4.1
- vroom 1.6.1
- waldo 0.4.0
- whisker 0.4.1
- withr 2.5.0
- xfun 0.37
- xml2 1.3.3
- xtable 1.8-4
- yaml 2.3.7
- yulab.utils 0.0.6
- zeallot 0.1.0
- zip 2.2.2
- zlibbioc 1.44.0
- debian/adduser 3.129
- debian/apt 2.5.3 b1
- debian/base-files 12.3
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- debian/bash 5.2~rc2-2
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- debian/r-cran-nnet 7.3-18-1
- debian/r-cran-rpart 4.1.19-1
- debian/r-cran-spatial 7.3-15-1
- debian/r-cran-survival 3.4-0-1
- debian/r-recommended 4.2.2-1
- debian/readline-common 8.2-1
- debian/rpcsvc-proto 1.4.2-4
- debian/sed 4.8-1
- debian/sensible-utils 0.0.17
- debian/subversion 1.14.2-4 b2
- debian/sysvinit-utils 3.05-6
- debian/tar 1.34 dfsg-1
- debian/tzdata 2022e-1
- debian/ucf 3.0043
- debian/unzip 6.0-27
- debian/usr-is-merged 33
- debian/util-linux-extra 2.38.1-5
- debian/util-linux 2.38.1-5
- debian/uuid-dev 2.38.1-5
- debian/vim-common 2:9.0.0626-1
- debian/vim-tiny 2:9.0.0626-1 b1
- debian/wget 1.21.3-1 b2
- debian/x11-common 1:7.7 23
- debian/xauth 1:1.1.1-1
- debian/xdg-utils 1.1.3-4.1
- debian/xz-utils 5.2.7-0.1
- debian/zip 3.0-12
- debian/zlib1g-dev 1:1.2.11.dfsg-4.1
- debian/zlib1g 1:1.2.11.dfsg-4.1
- bash 5.2.0
- bootstrap-accessibility-plugin 1.0.6
- bootstrap-colorpicker 3.4.0
- bootstrap-sass 3.4.1
- bootstrap 4.6.0
- bootstrap 5.2.2
- bootswatch 3.4.1
- bootswatch 4.6.0
- bootswatch 5.2.2