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Package Usage : cran : apeglm

Explore the latest package usage data for apeglm in the cran ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 43
Total downloads: 3,206
Showing first 100 dependents

More details on packages.ecosyste.ms - JSON

prismcmap/sushi v0.0.2

  • version: 1.12.0
Latest release: almost 4 years ago - 1,331 downloads - 723 dependencies
prismcmap/base-clue-pseq v0.0.1

  • version: 1.12.0
Latest release: about 4 years ago - 116 downloads - 318 dependencies
nciccbr/ccbr_r_4.3.0 v1

  • version: 1.22.1
Latest release: over 2 years ago - 155 downloads - 679 dependencies
evolomicsmbbt/rna_seq latest

  • version: 1.16.0
Latest release: almost 3 years ago - 138 downloads - 412 dependencies
sagnikbanerjee15/ngpint 1.0.0

  • version: 1.17.0
Latest release: about 4 years ago - 44 downloads - 2,335 dependencies
mfsentma/atacseq latest

  • version: 1.16.0
Latest release: over 2 years ago - 34 downloads - 852 dependencies
chlazaris/dge_env 0.1

  • version: 1.16.0
Latest release: over 2 years ago - 16 downloads - 320 dependencies
fallingstar10/hbsigrocker latest

  • version: 1.22.1
Latest release: over 2 years ago - 256 downloads - 1,223 dependencies
alenaerts/deseq2 v1

  • version: 1.22.1
Latest release: about 2 years ago - 20 downloads - 480 dependencies
sameetmehta/docker_report_apptainer devel

  • version: 1.22.1
Latest release: over 2 years ago - 21 downloads - 352 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 1.16.0
Latest release: over 2 years ago - 67 downloads - 2,387 dependencies
compbiocore/dscov_sct 20221201

  • version: 1.20.0
Latest release: about 3 years ago - 44 downloads - 1,031 dependencies
qdidiscoveryservices/diffbind latest

  • version: 1.22.1
Latest release: over 2 years ago - 44 downloads - 526 dependencies
danhumassmed/debrowser 1.0.1

Software for Bioinformatics pipelines DEBrowser

  • version: 1.20.0
Latest release: over 2 years ago - 67 downloads - 1,319 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.16.0
Latest release: almost 3 years ago - 115 downloads - 1,382 dependencies
shl198/rna_ppl latest

  • version: 1.18.0
Latest release: almost 3 years ago - 24 downloads - 2,099 dependencies
imegusu/rstudio_rnaseq_all3 latest

RStudio based on bioconductor/bioconductor_docker:RELEASE_3_16 for RNA-Seq

  • version: 1.20.0
Latest release: over 2 years ago - 33 downloads - 1,568 dependencies
ycli1995/bioinfo_dev 1.1.0

  • version: 1.22.1
Latest release: over 1 year ago - 185 downloads - 4,337 dependencies
wyangwu/r4.1.2 latest

  • version: 1.16.0
Latest release: over 2 years ago - 93 downloads - 827 dependencies
weishwu/diffbind 3.6.5

  • version: 1.18.0
Latest release: almost 3 years ago - 31 downloads - 1,507 dependencies
viascientific/deseq2-docker 2.0

  • version: 1.20.0
Latest release: over 2 years ago - 134 downloads - 375 dependencies
compbiocore/jupyterhub-docker-images-jh_image 20230524

  • version: 1.20.0
Latest release: over 2 years ago - 139 downloads - 3,115 dependencies
wlc27/dcanr v1

  • version: 1.20.0
Latest release: almost 3 years ago - 94 downloads - 1,681 dependencies
preethiilumina/diffbind 1.5.1

fixed genome name

  • version: 1.20.0
Latest release: 12 months ago - 319 downloads - 626 dependencies
andyvs/testimage 3.0

  • version: 1.20.0
Latest release: over 2 years ago - 47 downloads - 376 dependencies
maxfieldkelsey/snakesenescence latest

image for use in snakemake

  • version: 1.16.0
Latest release: almost 3 years ago - 33 downloads - 494 dependencies
chgyi/trinity 2.8.4

  • version: 1.0.3
Latest release: over 6 years ago - 21 downloads - 795 dependencies
viascientific/rstudio-app 1.0

  • version: 1.20.0
Latest release: over 2 years ago - 127 downloads - 1,074 dependencies
shashankti/bioc_docker v1

  • version: 1.21.0
Latest release: almost 3 years ago - 52 downloads - 1,350 dependencies
nfcore/circrna dev

Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.

  • version: 1.8.0
Latest release: about 3 years ago - 1,290 downloads - 654 dependencies
gesiscss/binder-statomics-2dsga2019-4a5361 1c74d6b57a18a85f98e3380f8356a4a6b5413520

  • version: 1.8.0
Latest release: almost 6 years ago - 69 downloads - 1,313 dependencies
cmccornack/crmsc latest

  • version: 1.16.0
Latest release: over 2 years ago - 407 downloads - 1,476 dependencies
etretiakov/workbench-session-complete jammy-2024.09.19-custom-12.9

  • version: 1.22.1
Latest release: about 1 year ago - 1,187 downloads - 6,961 dependencies
sgiamberardinorti/dge_analysis 202304171546_x86_64

202304171546 : Rv4.2.3 / argparse ________________ 202303100921 : Rv4.2.2 / no argparse

  • version: 1.20.0
Latest release: over 2 years ago - 150 downloads - 1,881 dependencies
ericsalomaki/rnaseq_r4_2 latest

  • version: 1.20.0
Latest release: almost 3 years ago - 49 downloads - 989 dependencies
cjchen/scauclass_2023 1.0

  • version: 1.22.1
Latest release: over 2 years ago - 116 downloads - 393 dependencies
skchronicles/flair v0.1.0

Docker image for FLAIR: Full-Length Alternative Isoform analysis of RNA

  • version: 1.16.0
Latest release: over 2 years ago - 343 downloads - 729 dependencies
chunjiesamliu/scmocha latest

  • version: 1.22.1
Latest release: over 2 years ago - 74 downloads - 1,258 dependencies
alexeymakhonin/bioinf-2022-notebook latest

  • version: 1.20.0
Latest release: almost 3 years ago - 24 downloads - 213 dependencies
etretiakov/rocker-session latest

  • version: 1.22.0
Latest release: over 2 years ago - 78 downloads - 2,565 dependencies
ericsalomaki/mirna 071723

  • version: 1.16.0
Latest release: over 2 years ago - 26 downloads - 1,834 dependencies
tamaraperteghella/r4_gencode latest

  • version: 1.16.0
Latest release: over 2 years ago - 20 downloads - 1,460 dependencies
bumproo/rnaseqclass23 latest

  • version: 1.22.1
Latest release: over 2 years ago - 603 downloads - 904 dependencies
costanzopadovano/bioconductor_r_image jupyter_notebook_version

Docker image preconfigured with R and Bioconductor for streamlined bioinformatics data analysis.

  • version: 1.23.1
Latest release: about 2 years ago - 67 downloads - 2,685 dependencies