Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

viascientific/deseq2-docker : 2.0

Latest release: over 1 year ago - 36 downloads - 375 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.60.2
BH 1.81.0-1
Biobase 2.58.0
BiocGenerics 0.44.0
BiocManager 1.30.20
BiocParallel 1.32.6
BiocVersion 3.16.0
Biostrings 2.66.0
Ckmeans.1d.dp 4.3.4
DBI 1.1.3
DESeq2 1.38.3
DOSE 3.24.2
DT 0.27
DelayedArray 0.24.0
GO.db 3.16.0
GOSemSim 2.24.0
GenomeInfoDb 1.34.9
GenomeInfoDbData 1.2.9
GenomicRanges 1.50.2
HDO.db 0.99.1
Harman 1.26.0
IRanges 2.32.0
KEGGREST 1.38.0
KEGGgraph 1.58.3
KernSmooth 2.23-20
MASS 7.3-54
MASS 7.3-58.3
Matrix 1.3-4
Matrix 1.5-1
MatrixGenerics 1.10.0
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
RSQLite 2.3.1
Rcpp 1.0.10
RcppArmadillo 0.12.2.0.0
RcppEigen 0.3.3.9.3
RcppNumerical 0.5-0
Rdpack 2.4
RdpackTester 1.0
Rgraphviz 2.42.0
S4Vectors 0.36.2
SQUAREM 2021.1
SummarizedExperiment 1.28.0
TSP 1.2-4
XML 3.99-0.14
XVector 0.38.0
annotate 1.76.0
ape 5.7-1
apeglm 1.20.0
aplot 0.1.10
ashr 2.2-54
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.1.2
base 4.2.3
bbmle 1.0.25
bdsmatrix 1.3-6
beeswarm 0.4.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
boot 1.3-28
brew 1.0-8
brio 1.1.3
broom 1.0.4
bslib 0.4.2
ca 0.71.1
caTools 1.18.2
cachem 1.0.7
callr 3.7.3
cellranger 1.1.0
class 7.3-19
class 7.3-21
cli 3.6.1
clipr 0.8.0
cluster 2.1.2
cluster 2.1.4
clusterProfiler 4.6.2
coda 0.19-4
codetools 0.2-18
codetools 0.2-19
colorspace 2.1-0
colourpicker 1.2.0
commonmark 1.9.0
compiler 4.1.2
compiler 4.2.3
conflicted 1.2.0
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 5.0.0
data.table 1.14.8
datasets 4.1.2
datasets 4.2.3
dbplyr 2.3.2
debrowser 1.26.3
dendextend 1.17.1
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.31
docopt 0.7.1
downlit 0.4.2
downloader 0.4
dplyr 1.1.1
dtplyr 1.3.1
edgeR 3.40.2
egg 0.4.5
ellipsis 0.3.2
emdbook 1.3.12
enrichplot 1.18.4
etrunct 0.1
evaluate 0.20
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
fastmatch 1.1-3
fgsea 1.24.0
fontawesome 0.5.0
forcats 1.0.0
foreach 1.5.2
foreign 0.8-81
foreign 0.8-82
formatR 1.14
fs 1.6.1
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.3.0
gclus 1.3.2
genefilter 1.80.3
geneplotter 1.76.0
generics 0.1.3
gert 1.9.2
ggbeeswarm 0.7.1
ggforce 0.4.1
ggfun 0.0.9
ggnewscale 0.4.8
ggplot2 3.4.2
ggplotify 0.1.0
ggraph 2.1.0
ggrepel 0.9.3
ggtree 3.6.2
gh 1.4.0
gitcreds 0.1.2
glue 1.6.2
googledrive 2.1.0
googlesheets4 1.1.0
gplots 3.1.3
grDevices 4.1.2
grDevices 4.2.3
graph 1.76.0
graphics 4.1.2
graphics 4.2.3
graphlayouts 0.8.4
grid 4.1.2
grid 4.2.3
gridExtra 2.3
gridGraphics 0.5-1
gson 0.1.0
gtable 0.3.3
gtools 3.9.4
haven 2.5.2
heatmaply 1.4.2
highr 0.10
hms 1.1.3
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.6.9
httr2 0.2.2
httr 1.4.5
ids 1.0.1
igraph 1.4.2
ini 0.3.1
invgamma 1.1
irlba 2.3.5.1
isoband 0.2.7
iterators 1.0.14
jquerylib 0.1.4
jsonlite 1.8.4
knitr 1.42
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-45
lazyeval 0.2.2
lifecycle 1.0.3
limma 3.54.2
littler 0.3.15
locfit 1.5-9.7
lubridate 1.9.2
magrittr 2.0.3
markdown 1.6
matrixStats 0.63.0
memoise 2.0.1
methods 4.1.2
methods 4.2.3
mgcv 1.8-38
mgcv 1.8-42
mime 0.12
miniUI 0.1.1.1
mixsqp 0.3-48
modelr 0.1.11
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-153
nlme 3.1-162
nnet 7.3-16
nnet 7.3-18
numDeriv 2016.8-1.1
openssl 2.0.6
org.Hs.eg.db 3.16.0
org.Mm.eg.db 3.16.0
org.testing.db 0.1
parallel 4.1.2
parallel 4.2.3
patchwork 1.1.2
pathview 1.38.0
pheatmap 1.0.12
pillar 1.9.0
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2
plogr 0.2.0
plotly 4.10.1
plyr 1.8.8
png 0.1-8
polyclip 1.10-4
praise 1.0.0
prettyunits 1.1.1
processx 3.8.0
profvis 0.3.7
progress 1.2.2
promises 1.2.0.1
ps 1.7.4
purrr 1.0.1
qap 0.1-2
qvalue 2.30.0
ragg 1.2.5
rappdirs 0.3.3
rbibutils 2.2.13
rcmdcheck 1.4.0
readr 2.1.4
readxl 1.4.2
registry 0.5-1
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.2
reshape2 1.4.4
rlang 1.1.0
rmarkdown 2.21
roxygen2 7.2.3
rpart 4.1-15
rpart 4.1.19
rprojroot 2.0.3
rstudioapi 0.14
rversions 2.1.2
rvest 1.0.3
sass 0.4.5
scales 1.2.1
scatterpie 0.1.8
selectr 0.4-2
seriation 1.4.2
sessioninfo 1.2.2
shadowtext 0.1.2
shiny 1.7.4
shinyBS 0.61.1
shinydashboard 0.7.2
shinyjs 2.1.0
snow 0.4-4
sourcetools 0.1.7-1
spatial 7.3-11
spatial 7.3-14
splines 4.1.2
splines 4.2.3
stats4 4.1.2
stats4 4.2.3
stats 4.1.2
stats 4.2.3
stringi 1.7.12
stringr 1.5.0
survival 3.2-13
survival 3.5-5
sva 3.46.0
sys 3.4.1
systemfonts 1.0.4
tcltk 4.1.2
tcltk 4.2.3
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.7
textshaping 0.3.6
tibble 3.2.1
tidygraph 1.2.3
tidyr 1.3.0
tidyselect 1.2.0
tidytree 0.4.2
tidyverse 2.0.0
timechange 0.2.0
tinytex 0.44
tools 4.1.2
tools 4.2.3
translations 4.1.2
translations 4.2.3
treeio 1.22.0
truncnorm 1.0-9
tweenr 2.0.2
tzdb 0.3.0
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.3
utils 4.1.2
utils 4.2.3
uuid 1.1-0
vctrs 0.6.1
vipor 0.4.5
viridis 0.6.2
viridisLite 0.4.1
vroom 1.6.1
waldo 0.4.0
webshot 0.5.4
whisker 0.4.1
withr 2.5.0
xfun 0.38
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
yulab.utils 0.0.6
zip 2.2.2
zlibbioc 1.44.0

bash 5.0.17
python 2.7.18
python 3.7.3
python 3.8.10

com.ibm.icu.base:base 4.4
com.ibm.icu.charset:icu4j-charset 60.2
com.ibm.icu.localespi:icu4j-localespi 60.2
com.ibm.icu:icu4j 60.2
com.ibm.icu:icu 4.4

bootstrap-accessibility-plugin 1.0.6
bootstrap-colorpicker 3.4.0
bootstrap-sass 3.4.1
bootstrap 4.6.0
bootstrap 5.2.2
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.2.2
casperjs 1.1.0-beta5

PyGObject 3.36.0
argparse 1.2.1
certifi 2019.11.28
chardet 3.0.4
dbus-python 1.2.16
idna 2.8
python-apt 2.0.1 ubuntu0.20.4.1
requests-unixsocket 0.2.0
requests 2.22.0
setuptools 44.0.0
six 1.14.0
urllib3 1.25.8
wsgiref 0.1.2