sameetmehta/docker_report_apptainer : devel

Latest release: over 2 years ago - 21 downloads - 352 dependencies

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Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnnotationDbi 1.62.1
AnnotationFilter 1.24.0
AnnotationHub 3.8.0
AsioHeaders 1.22.1-2
BH 1.81.0-1
Biobase 2.60.0
BiocFileCache 2.8.0
BiocGenerics 0.46.0
BiocIO 1.10.0
BiocManager 1.30.20
BiocParallel 1.34.2
BiocVersion 3.17.1
Biostrings 2.68.1
DBI 1.1.3
DESeq2 1.40.1
DEXSeq 1.46.0
DT 0.28
DelayedArray 0.26.3
DelayedMatrixStats 1.22.0
GenomeInfoDb 1.36.0
GenomeInfoDbData 1.2.10
GenomicAlignments 1.36.0
GenomicFeatures 1.52.0
GenomicRanges 1.52.0
HDF5Array 1.28.1
IRanges 2.34.0
KEGGREST 1.40.0
KernSmooth 2.23-21
MASS 7.3-60
Matrix 1.5-4.1
MatrixGenerics 1.12.0
ProtGenerics 1.32.0
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
RSQLite 2.3.1
Rcpp 1.0.10
RcppArmadillo 0.12.2.0.0
RcppEigen 0.3.3.9.3
RcppNumerical 0.5-0
Rhdf5lib 1.22.0
Rhtslib 2.2.0
Rsamtools 2.16.0
S4Arrays 1.0.4
S4Vectors 0.38.1
SQUAREM 2021.1
SingleCellExperiment 1.22.0
SummarizedExperiment 1.30.1
VennDiagram 1.7.3
XML 3.99-0.14
XVector 0.40.0
affy 1.78.0
affyio 1.70.0
airway 1.20.0
annotate 1.78.0
apeglm 1.22.1
argparse 2.2.2
ashr 2.2-54
askpass 1.1
backports 1.4.1
base64enc 0.1-3
base 4.3.0
bbmle 1.0.25
bdsmatrix 1.3-6
beachmat 2.16.0
beachtest 1.0.0
bench 1.1.3
biomaRt 2.56.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
broom 1.0.4
bslib 0.4.2
cachem 1.0.8
callr 3.7.3
carData 3.0-5
cellranger 1.1.0
class 7.3-22
cli 3.6.1
clipr 0.8.0
cluster 2.1.4
coda 0.19-4
codetools 0.2-19
colorspace 2.1-0
commonmark 1.9.0
compiler 4.3.0
conflicted 1.2.0
covr 3.6.2
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 5.0.0
data.table 1.14.8
datasets 4.3.0
dbplyr 2.3.2
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
diffviewer 0.1.1
digest 0.6.31
docopt 0.7.1
downlit 0.4.2
dplyr 1.1.2
dtplyr 1.3.1
ellipsis 0.3.2
emdbook 1.3.12
ensembldb 2.24.0
etrunct 0.1
evaluate 0.21
expm 0.999-7
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
filelock 1.0.2
findpython 1.0.8
fontawesome 0.5.1
forcats 1.0.0
foreign 0.8-84
formatR 1.14
fs 1.6.2
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.4.0
genefilter 1.82.1
geneplotter 1.78.0
generics 0.1.3
gert 1.9.2
ggplot2 3.4.2
ggrepel 0.9.3
ggupset 0.3.0
gh 1.4.0
gitcreds 0.1.2
glmGamPoi 1.12.1
glue 1.6.2
googledrive 2.1.0
googlesheets4 1.1.0
grDevices 4.3.0
graphics 4.3.0
grid 4.3.0
gtable 0.3.3
haven 2.5.2
highr 0.10
hms 1.1.3
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.6.11
httr2 0.2.3
httr 1.4.6
hunspell 3.0.2
hwriter 1.3.2.1
ids 1.0.1
ini 0.3.1
interactiveDisplayBase 1.38.0
invgamma 1.1
irlba 2.3.5.1
isoband 0.2.7
jose 1.2.0
jpeg 0.1-10
jquerylib 0.1.4
jsonlite 1.8.4
kableExtra 1.3.4
knitr 1.42
labeling 0.4.2
lambda.r 1.2.4
later 1.3.1
lattice 0.21-8
lazyeval 0.2.2
lifecycle 1.0.3
limma 3.56.1
littler 0.3.18
locfit 1.5-9.7
lubridate 1.9.2
magrittr 2.0.3
matrixStats 0.63.0
memoise 2.0.1
methods 4.3.0
mgcv 1.8-42
mime 0.12
miniUI 0.1.1.1
mixsqp 0.3-48
modelr 0.1.11
morebeach 1.0.0
morebeachtests 1.0.0
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-162
nnet 7.3-19
numDeriv 2016.8-1.1
openssl 2.0.6
org.testing.db 0.1
packrat 0.9.1
parallel 4.3.0
pasilla 1.28.0
patchwork 1.1.2
pbapply 1.7-0
pheatmap 1.0.12
pillar 1.9.0
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2
plogr 0.2.0
plumber 1.2.1
plyr 1.8.8
png 0.1-8
praise 1.0.0
preprocessCore 1.62.1
prettyunits 1.1.1
processx 3.8.1
profmem 0.6.0
profvis 0.3.8
progress 1.2.2
promises 1.2.0.1
ps 1.7.5
purrr 1.0.1
quarto 1.2
ragg 1.2.5
rappdirs 0.3.3
rcmdcheck 1.4.0
readr 2.1.4
readxl 1.4.2
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.2
restfulr 0.0.15
rex 1.2.1
rhdf5 2.44.0
rhdf5filters 1.12.1
rjson 0.2.21
rlang 1.1.1
rmarkdown 2.21
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rsconnect 0.8.29
rstudioapi 0.14
rtracklayer 1.60.0
rversions 2.1.2
rvest 1.0.3
sass 0.4.6
scales 1.2.1
selectr 0.4-2
sessioninfo 1.2.2
shiny 1.7.4
snow 0.4-4
sodium 1.2.1
sourcetools 0.1.7-1
sparseMatrixStats 1.12.0
spatial 7.3-16
spelling 2.2.1
splines 4.3.0
statmod 1.5.0
stats4 4.3.0
stats 4.3.0
stringi 1.7.12
stringr 1.5.0
survival 3.5-5
svglite 2.1.1
swagger 3.33.1
sys 3.4.2
systemfonts 1.0.4
tcltk 4.3.0
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.8
textshaping 0.3.6
tibble 3.2.1
tidyr 1.3.0
tidyselect 1.2.0
tidyverse 2.0.0
timechange 0.2.0
tinytex 0.45
tools 4.3.0
translations 4.3.0
truncnorm 1.0-9
tximeta 1.18.0
tximport 1.28.0
tximportData 1.28.0
tzdb 0.4.0
unix 1.5.5
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.3
utils 4.3.0
uuid 1.1-0
vctrs 0.6.2
viridisLite 0.4.2
vroom 1.6.3
vsn 3.68.0
waldo 0.5.1
webfakes 1.2.0
webshot 0.5.4
websocket 1.4.1
webutils 1.1
whisker 0.4.1
withr 2.5.0
xfun 0.39
xml2 1.3.4
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
zip 2.3.0
zlibbioc 1.46.0

bash 5.1.16
python 2.7.18
python 3.10.6

github.com/evanw/esbuild v0.0.0-20220830001118-78a1e00b2e69
golang.org/x/sys v0.0.0-20220715151400-c0bba94af5f8
stdlib 1.19

jrt-fs:jrt-fs 11.0.18
org.debian.security.UpdateCertificates:ca-certificates-java *

bootstrap-accessibility-plugin 1.0.6
bootstrap-colorpicker 3.4.0
bootstrap-sass 3.4.1
bootstrap 4.6.0
bootstrap 5.2.2
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.2.2
casperjs 1.1.0-beta5
context 1.0.0
swagger-ui-dist 3.33.0

PyYAML 6.0
argparse 1.2.1
joblib 1.2.0
numpy 1.24.3
pandas 2.0.1
pip 22.0.2
python-dateutil 2.8.2
pytz 2023.3
scikit-learn 1.2.2
scipy 1.10.1
setuptools 44.1.1
setuptools 59.6.0
six 1.16.0
threadpoolctl 3.1.0
tzdata 2023.3
wheel 0.37.1
wsgiref 0.1.2

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sameetmehta/docker_report_apptainer : devel

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