luisas/rdeanalysis : latest

Latest release: almost 6 years ago - 72 downloads - 508 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.48.0
BH 1.72.0-3
Biobase 2.46.0
BiocGenerics 0.32.0
BiocManager 1.30.10
BiocParallel 1.20.1
BiocVersion 3.10.1
DBI 1.1.0
DESeq2 1.26.0
DT 0.13
DelayedArray 0.12.3
FNN 1.1.3
Formula 1.2-3
GenomeInfoDb 1.22.1
GenomeInfoDbData 1.2.2
GenomicRanges 1.38.0
Hmisc 4.4-0
IRanges 2.20.2
KernSmooth 2.23-16
MASS 7.3-51.5
MAST 1.12.0
Matrix 1.2-18
R6 2.4.1
RANN 2.6.1
RColorBrewer 1.1-2
RCurl 1.98-1.2
ROCR 1.0-7
RSQLite 2.2.0
RSpectra 0.16-0
Rcpp 1.0.4.6
RcppAnnoy 0.0.16
RcppArmadillo 0.9.860.2.0
RcppEigen 0.3.3.7.0
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
Rtsne 0.15
S4Vectors 0.24.4
Seurat 3.1.5
SingleCellExperiment 1.8.0
SummarizedExperiment 1.16.1
XML 3.99-0.3
XVector 0.26.0
abind 1.4-5
acepack 1.4.1
annotate 1.64.0
ape 5.3
askpass 1.1
assertthat 0.2.1
backports 1.1.6
base64enc 0.1-3
base 3.6.3
bit64 0.9-7
bit 1.1-15.2
bitops 1.0-6
blob 1.2.1
boot 1.3-24
brew 1.0-6
caTools 1.18.0
callr 3.4.3
checkmate 2.0.0
class 7.3-15
cli 2.0.2
clipr 0.7.0
cluster 2.1.0
codetools 0.2-16
colorspace 1.4-1
commonmark 1.7
compiler 3.6.3
covr 3.5.0
cowplot 1.0.0
crayon 1.3.4
crosstalk 1.1.0.1
curl 4.3
data.table 1.12.8
datasets 3.6.3
desc 1.2.0
devtools 2.3.0
digest 0.6.25
dplyr 0.8.5
dqrng 0.2.1
edgeR 3.28.1
ellipsis 0.3.0
evaluate 0.14
fansi 0.4.1
farver 2.0.3
fitdistrplus 1.0-14
foreign 0.8-75
formatR 1.7
fs 1.4.1
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.5.0
future 1.17.0
gdata 2.18.0
genefilter 1.68.0
geneplotter 1.64.0
ggplot2 3.3.0
ggrepel 0.8.2
ggridges 0.5.2
gh 1.1.0
git2r 0.26.1
globals 0.12.5
glue 1.4.0
gplots 3.0.3
grDevices 3.6.3
graphics 3.6.3
grid 3.6.3
gridExtra 2.3
gtable 0.3.0
gtools 3.8.2
hexbin 1.28.1
highr 0.8
hms 0.5.3
htmlTable 1.13.3
htmltools 0.4.0
htmlwidgets 1.5.1
httr 1.4.1
ica 1.0-2
igraph 1.2.5
ini 0.3.1
irlba 2.3.3
isoband 0.2.1
jpeg 0.1-8.1
jsonlite 1.6.1
knitr 1.28
labeling 0.3
lambda.r 1.2.4
later 1.0.0
lattice 0.20-40
latticeExtra 0.6-29
lazyeval 0.2.2
leiden 0.3.3
lifecycle 0.2.0
limma 3.42.2
listenv 0.8.0
littler 0.3.9
lmtest 0.9-37
locfit 1.5-9.4
lsei 1.2-0
magrittr 1.5
markdown 1.1
matrixStats 0.56.0
memoise 1.1.0
methods 3.6.3
mgcv 1.8-31
mime 0.9
munsell 0.5.0
nlme 3.1-144
nnet 7.3-13
npsurv 0.4-0
openssl 1.4.1
org.testing.db 0.1
parallel 3.6.3
patchwork 1.0.0
pbapply 1.4-2
pillar 1.4.3
pkgbuild 1.0.7
pkgconfig 2.0.3
pkgload 1.0.2
plogr 0.2.0
plotly 4.9.2.1
plyr 1.8.6
png 0.1-7
praise 1.0.0
prettyunits 1.1.1
processx 3.4.2
progress 1.2.2
promises 1.1.0
ps 1.3.2
purrr 0.3.4
rappdirs 0.3.1
rcmdcheck 1.3.3
readr 1.3.1
rematch2 2.1.1
remotes 2.1.1
reshape2 1.4.4
reticulate 1.15
rex 1.2.0
rlang 0.4.5
roxygen2 7.1.0
rpart 4.1-15
rprojroot 1.3-2
rstudioapi 0.11
rsvd 1.0.3
rversions 2.0.1
scales 1.1.0
sctransform 0.2.1
sessioninfo 1.1.1
sitmo 2.0.1
snow 0.4-3
softImpute 1.4
spatial 7.3-11
splines 3.6.3
stats4 3.6.3
stats 3.6.3
stringi 1.4.6
stringr 1.4.0
survival 3.1-8
sys 3.3
tcltk 3.6.3
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 2.3.2
tibble 3.0.1
tidyr 1.0.2
tidyselect 1.0.0
tools 3.6.3
translations 3.6.3
tsne 0.1-3
usethis 1.6.0
utf8 1.1.4
utils 3.6.3
uwot 0.1.8
vctrs 0.2.4
viridis 0.5.1
viridisLite 0.3.0
whisker 0.4
withr 2.2.0
xfun 0.13
xml2 1.3.2
xopen 1.0.0
xtable 1.8-4
yaml 2.2.1
zinbwave 1.8.0
zlibbioc 1.32.0
zoo 1.8-7

debian/adduser 3.118
debian/apt 1.8.4
debian/base-files 11
debian/base-passwd 3.5.47
debian/bash 5.0-5
debian/binutils-common 2.34-3
debian/binutils-x86-64-linux-gnu 2.34-3
debian/binutils 2.34-3
debian/bsdutils 1:2.34-0.1
debian/build-essential 12.8
debian/bzip2 1.0.8-2
debian/ca-certificates 20190110
debian/coreutils 8.30-3 b1
debian/cpp-9 9.2.1-30
debian/cpp 4:9.2.1-3.1
debian/dash 0.5.10.2-6
debian/debconf 1.5.73
debian/debian-archive-keyring 2019.1
debian/debianutils 4.9.1
debian/diffutils 1:3.7-3
debian/dpkg-dev 1.19.7
debian/dpkg 1.19.7
debian/e2fsprogs 1.45.5-2
debian/ed 1.16-1
debian/fdisk 2.34-0.1
debian/findutils 4.7.0-1
debian/fontconfig-config 2.13.1-2
debian/fontconfig 2.13.1-2 b1
debian/fonts-dejavu-core 2.37-1
debian/fonts-texgyre 20180621-3
debian/g -9 9.2.1-30
debian/g 4:9.2.1-3.1
debian/gcc-10-base 10-20200222-1
debian/gcc-9-base 9.2.1-30
debian/gcc-9 9.2.1-30
debian/gcc 4:9.2.1-3.1
debian/gfortran-9 9.2.1-30
debian/gfortran 4:9.2.1-3.1
debian/gpgv 2.2.19-1
debian/grep 3.4-1
debian/gzip 1.9-3 b1
debian/hostname 3.23
debian/icu-devtools 63.2-2
debian/init-system-helpers 1.57
debian/iproute2 5.5.0-1
debian/iputils-ping 3:20190709-3
debian/less 551-1
debian/libacl1 2.2.53-5
debian/libapt-pkg5.0 1.8.4
debian/libasan5 9.2.1-30
debian/libatomic1 10-20200222-1
debian/libattr1 1:2.4.48-5
debian/libaudit-common 1:2.8.5-2
debian/libaudit1 1:2.8.5-2 b1
debian/libbinutils 2.34-3
debian/libblas-dev 3.9.0-1
debian/libblas3 3.9.0-1
debian/libblkid1 2.34-0.1
debian/libbrotli1 1.0.7-6
debian/libbsd0 0.10.0-1
debian/libbz2-1.0 1.0.8-2
debian/libbz2-dev 1.0.8-2
debian/libc-bin 2.29-10
debian/libc-dev-bin 2.29-10
debian/libc-l10n 2.29-10
debian/libc6-dev 2.29-10
debian/libc6 2.29-10
debian/libcairo2 1.16.0-4
debian/libcap-ng0 0.7.9-2.1 b1
debian/libcap2-bin 1:2.32-1
debian/libcap2 1:2.32-1
debian/libcc1-0 10-20200222-1
debian/libcom-err2 1.45.5-2
debian/libcrypt-dev 1:4.4.10-10
debian/libcrypt1 1:4.4.10-10
debian/libctf-nobfd0 2.34-3
debian/libctf0 2.34-3
debian/libcurl4-openssl-dev 7.68.0-1
debian/libcurl4 7.68.0-1
debian/libdatrie1 0.2.12-3
debian/libdb5.3 5.3.28 dfsg1-0.6
debian/libdebconfclient0 0.251
debian/libdpkg-perl 1.19.7
debian/libelf1 0.176-1.1
debian/libexpat1 2.2.9-1
debian/libext2fs2 1.45.5-2
debian/libfdisk1 2.34-0.1
debian/libffi7 3.3-3
debian/libfontconfig1 2.13.1-2 b1
debian/libfreetype6 2.10.1-2
debian/libfribidi0 1.0.8-2
debian/libgcc-9-dev 9.2.1-30
debian/libgcc-s1 10-20200222-1
debian/libgcc1 1:10-20200222-1
debian/libgcrypt20-dev 1.8.5-5
debian/libgcrypt20 1.8.5-5
debian/libgdbm-compat4 1.18.1-5
debian/libgdbm6 1.18.1-5
debian/libgfortran-9-dev 9.2.1-30
debian/libgfortran5 10-20200222-1
debian/libglib2.0-0 2.62.5-1
debian/libgmp10 2:6.1.2 dfsg-4
debian/libgnutls30 3.6.12-2
debian/libgomp1 10-20200222-1
debian/libgpg-error-dev 1.37-1
debian/libgpg-error0 1.37-1
debian/libgraphite2-3 1.3.13-11
debian/libgssapi-krb5-2 1.17-6
debian/libharfbuzz0b 2.6.4-1
debian/libhogweed5 3.5.1 really3.5.1-2
debian/libice6 2:1.0.9-2
debian/libicu-dev 63.2-2
debian/libicu63 63.2-2
debian/libidn2-0 2.2.0-2
debian/libisl22 0.22.1-1
debian/libitm1 10-20200222-1
debian/libjbig0 2.1-3.1 b2
debian/libjpeg-dev 1:1.5.2-2
debian/libjpeg62-turbo-dev 1:1.5.2-2 b1
debian/libjpeg62-turbo 1:1.5.2-2 b1
debian/libk5crypto3 1.17-6
debian/libkeyutils1 1.6.1-2
debian/libkrb5-3 1.17-6
debian/libkrb5support0 1.17-6
debian/liblapack-dev 3.9.0-1
debian/liblapack3 3.9.0-1
debian/libldap-2.4-2 2.4.49 dfsg-1
debian/libldap-common 2.4.49 dfsg-1
debian/liblsan0 10-20200222-1
debian/liblz4-1 1.9.2-2
debian/liblzma-dev 5.2.4-1 b1
debian/liblzma5 5.2.4-1 b1
debian/libmnl0 1.0.4-2 b1
debian/libmount1 2.34-0.1
debian/libmpc3 1.1.0-1
debian/libmpfr6 4.0.2-1
debian/libncurses-dev 6.1 20191019-1
debian/libncurses5-dev 6.1 20191019-1
debian/libncurses6 6.1 20191019-1
debian/libncursesw6 6.1 20191019-1
debian/libnettle7 3.5.1 really3.5.1-2
debian/libnghttp2-14 1.40.0-1
debian/libp11-kit0 0.23.20-1
debian/libpam-modules-bin 1.3.1-5
debian/libpam-modules 1.3.1-5
debian/libpam-runtime 1.3.1-5
debian/libpam0g 1.3.1-5
debian/libpango-1.0-0 1.42.4-8
debian/libpangocairo-1.0-0 1.42.4-8
debian/libpangoft2-1.0-0 1.42.4-8
debian/libpaper-utils 1.1.28 b1
debian/libpaper1 1.1.28 b1
debian/libpcre16-3 2:8.39-12 b1
debian/libpcre2-16-0 10.34-7
debian/libpcre2-32-0 10.34-7
debian/libpcre2-8-0 10.34-7
debian/libpcre2-dev 10.34-7
debian/libpcre2-posix2 10.34-7
debian/libpcre3-dev 2:8.39-12 b1
debian/libpcre32-3 2:8.39-12 b1
debian/libpcre3 2:8.39-12 b1
debian/libpcrecpp0v5 2:8.39-12 b1
debian/libperl5.30 5.30.0-9
debian/libpixman-1-0 0.36.0-1
debian/libpng-dev 1.6.37-2
debian/libpng16-16 1.6.37-2
debian/libpsl5 0.20.2-2
debian/libquadmath0 10-20200222-1
debian/libreadline-dev 8.0-4
debian/libreadline8 8.0-4
debian/librtmp1 2.4 20151223.gitfa8646d.1-2 b1
debian/libsasl2-2 2.1.27 dfsg-2
debian/libsasl2-modules-db 2.1.27 dfsg-2
debian/libseccomp2 2.4.2-2
debian/libselinux1 3.0-1 b1
debian/libsemanage-common 3.0-1
debian/libsemanage1 3.0-1 b1
debian/libsepol1 3.0-1
debian/libsm6 2:1.2.3-1
debian/libsmartcols1 2.34-0.1
debian/libss2 1.45.5-2
debian/libssh2-1-dev 1.8.0-2.1
debian/libssh2-1 1.8.0-2.1
debian/libssl-dev 1.1.1g-1
debian/libssl1.1 1.1.1g-1
debian/libstdc -9-dev 9.2.1-30
debian/libstdc 6 10-20200222-1
debian/libsystemd0 244.3-1
debian/libtasn1-6 4.15.0-2
debian/libtcl8.6 8.6.10 dfsg-1
debian/libthai-data 0.1.28-3
debian/libthai0 0.1.28-3
debian/libtiff5 4.1.0 git191117-2
debian/libtinfo6 6.1 20191019-1
debian/libtk8.6 8.6.10-1
debian/libtsan0 10-20200222-1
debian/libubsan1 10-20200222-1
debian/libudev1 244.3-1
debian/libunistring2 0.9.10-2
debian/libuuid1 2.34-0.1
debian/libwebp6 0.6.1-2 b1
debian/libx11-6 2:1.6.9-1
debian/libx11-data 2:1.6.9-1
debian/libxau6 1:1.0.8-1 b2
debian/libxcb-render0 1.13.1-5
debian/libxcb-shm0 1.13.1-5
debian/libxcb1 1.13.1-5
debian/libxdmcp6 1:1.1.2-3
debian/libxext6 2:1.3.3-1 b2
debian/libxft2 2.3.2-2
debian/libxml2-dev 2.9.10 dfsg-5
debian/libxml2 2.9.10 dfsg-5
debian/libxmuu1 2:1.1.2-2 b3
debian/libxrender1 1:0.9.10-1
debian/libxss1 1:1.2.3-1
debian/libxt6 1:1.1.5-1 b3
debian/libxtables12 1.8.4-3
debian/libzstd1 1.4.4 dfsg-3
debian/linux-libc-dev 5.4.19-1
debian/littler 0.3.9-1
debian/locales 2.29-10
debian/login 1:4.8.1-1
debian/logsave 1.45.5-2
debian/lsb-base 11.1.0
debian/make 4.2.1-1.2
debian/mawk 1.3.4.20200120-2
debian/mount 2.34-0.1
debian/ncurses-base 6.1 20191019-1
debian/ncurses-bin 6.1 20191019-1
debian/openssl 1.1.1d-2
debian/passwd 1:4.8.1-1
debian/patch 2.7.6-6
debian/perl-base 5.30.0-9
debian/perl-modules-5.30 5.30.0-9
debian/perl 5.30.0-9
debian/pkg-config 0.29-6
debian/r-base-core 3.6.2.20200221-1
debian/r-base-dev 3.6.2-2
debian/r-base 3.6.2-2
debian/r-cran-boot 1.3-24-2
debian/r-cran-class 7.3-15-1 b1
debian/r-cran-cluster 2.1.0-2
debian/r-cran-codetools 0.2-16-1
debian/r-cran-foreign 0.8.75-1
debian/r-cran-kernsmooth 2.23-16-1 1
debian/r-cran-lattice 0.20-40-1
debian/r-cran-littler 0.3.9-1
debian/r-cran-mass 7.3-51.5-2
debian/r-cran-matrix 1.2-18-1
debian/r-cran-mgcv 1.8-31-1
debian/r-cran-nlme 3.1.144-1
debian/r-cran-nnet 7.3-13-1
debian/r-cran-rpart 4.1-15-2
debian/r-cran-spatial 7.3-11-2 b2
debian/r-cran-survival 3.1-8-1
debian/r-recommended 3.6.2-2
debian/readline-common 8.0-4
debian/sed 4.7-1
debian/sensible-utils 0.0.12 nmu1
debian/sysvinit-utils 2.96-2.1
debian/tar 1.30 dfsg-6 b1
debian/tzdata 2019c-3
debian/ucf 3.0038 nmu1
debian/unzip 6.0-25
debian/util-linux 2.34-0.1
debian/vim-common 2:8.1.2269-1
debian/vim-tiny 2:8.1.2269-1 b1
debian/wget 1.20.3-1 b2
debian/x11-common 1:7.7 20
debian/xauth 1:1.0.10-1
debian/xdg-utils 1.1.3-1
debian/xxd 2:8.1.2269-1 b1
debian/xz-utils 5.2.4-1 b1
debian/zip 3.0-11 b1
debian/zlib1g-dev 1:1.2.11.dfsg-2
debian/zlib1g 1:1.2.11.dfsg-2

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