Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
chgyi/trinity : 2.8.4
Latest release: almost 6 years ago - 16 downloads - 795 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- ALL 1.20.0
- AnnotationDbi 1.40.0
- BH 1.65.0-1
- BiasedUrn 1.07
- Biobase 2.38.0
- BiocGenerics 0.24.0
- BiocInstaller 1.28.0
- BiocParallel 1.12.0
- BiocStyle 2.6.1
- Biostrings 2.46.0
- DBI 0.7
- DESeq2 1.18.1
- DelayedArray 0.4.1
- DynDoc 1.56.0
- Formula 1.2-2
- GO.db 3.5.0
- GOplot 1.0.2
- GenomeInfoDb 1.14.0
- GenomeInfoDbData 1.0.0
- GenomicAlignments 1.14.1
- GenomicRanges 1.30.1
- Glimma 1.6.0
- Hmisc 4.1-1
- IHW 1.6.0
- IRanges 2.12.0
- KernSmooth 2.23-15
- MASS 7.3-47
- Matrix 1.2-10
- R6 2.2.2
- RColorBrewer 1.1-2
- RCurl 1.95-4.10
- ROTS 1.6.0
- RSQLite 2.0
- RUnit 0.4.31
- Rcpp 0.12.15
- RcppArmadillo 0.8.300.1.0
- Rsamtools 1.30.0
- S4Vectors 0.16.0
- SQUAREM 2017.10-1
- SummarizedExperiment 1.8.1
- XML 3.98-1.9
- XVector 0.18.0
- acepack 1.4.1
- affy 1.56.0
- affyio 1.48.0
- airway 0.112.0
- akima 0.6-2
- amap 0.8-14
- annotate 1.56.1
- ape 5.0
- apeglm 1.0.3
- argparse 1.1.1
- ashr 2.0.5
- assertthat 0.2.0
- backports 1.1.2
- base64enc 0.1-3
- base 3.4.1
- bbmle 1.0.20
- bindr 0.1
- bindrcpp 0.2
- bit64 0.9-7
- bit 1.1-12
- bitops 1.0-6
- blob 1.1.0
- bookdown 0.6
- boot 1.3-19
- broom 0.4.3
- caTools 1.17.1
- callr 2.0.2
- cellranger 1.1.0
- checkmate 1.8.5
- class 7.3-14
- cli 1.0.0
- cluster 2.0.6
- coda 0.19-1
- codetools 0.2-15
- colorspace 1.3-2
- compiler 3.4.1
- crayon 1.3.4
- crosstalk 1.0.0
- ctc 1.52.0
- curl 3.1
- data.table 1.10.4-3
- datasets 3.4.1
- dbplyr 1.2.0
- debugme 1.1.0
- dichromat 2.0-0
- digest 0.6.15
- doParallel 1.0.11
- dplyr 0.7.4
- edgeR 3.20.8
- emdbook 1.3.9
- etrunct 0.1
- evaluate 0.10.1
- exNSS4 1.1
- expm 0.999-2
- fastcluster 1.1.25
- fdrtool 1.2.15
- feather 0.3.1
- findpython 1.0.3
- forcats 0.2.0
- foreach 1.4.4
- foreign 0.8-69
- futile.logger 1.4.3
- futile.options 1.0.0
- gam 1.14-4
- gdata 2.18.0
- gee 4.13-19
- genefilter 1.60.0
- geneplotter 1.56.0
- getopt 1.20.1
- ggdendro 0.1-20
- ggplot2 2.2.1
- glue 1.2.0
- golubEsets 1.20.0
- gplots 3.0.1
- grDevices 3.4.1
- graphics 3.4.1
- grid 3.4.1
- gridExtra 2.3
- gtable 0.2.0
- gtools 3.5.0
- haven 1.1.1
- highr 0.6
- hms 0.4.1
- htmlTable 1.11.2
- htmltools 0.3.6
- htmlwidgets 1.0
- httpuv 1.3.5
- iterators 1.0.9
- jsonlite 1.5
- knitr 1.19
- labeling 0.3
- lambda.r 1.2
- lattice 0.20-35
- latticeExtra 0.6-28
- lazyeval 0.2.1
- limma 3.34.8
- locfit 1.5-9.1
- lpsymphony 1.7.1
- lubridate 1.7.2
- magrittr 1.5
- markdown 0.8
- matrixStats 0.53.1
- memoise 1.1.0
- methods 3.4.1
- mgcv 1.8-17
- mime 0.5
- misc3d 0.8-4
- mnormt 1.5-5
- modelr 0.1.1
- munsell 0.4.3
- nlme 3.1-131
- nnet 7.3-12
- numDeriv 2016.8-1
- org.Hs.eg.db 3.5.0
- org.testing.db 0.1
- parallel 3.4.1
- pasilla 1.6.0
- pbapply 1.3-4
- pheatmap 1.0.8
- pillar 1.1.0
- pkgA 1.2
- pkgB 1.0
- pkgconfig 2.0.1
- plogr 0.1-1
- plyr 1.8.4
- praise 1.0.0
- preprocessCore 1.40.0
- prettyunits 1.0.2
- progress 1.1.2
- progresstest 1.0.0
- proto 1.0.0
- pscl 1.5.2
- psych 1.7.8
- purrr 0.2.4
- qvalue 2.10.0
- readr 1.1.1
- readxl 1.0.0
- rematch 1.0.1
- reprex 0.1.2
- reshape2 1.4.3
- rlang 0.1.6
- rmarkdown 1.8
- rpart 4.1-11
- rprojroot 1.3-2
- rstudioapi 0.7
- rtracklayer 1.38.3
- scales 0.5.0
- selectr 0.3-1
- shiny 1.0.5
- slam 0.1-42
- sm 2.2-5.4
- snow 0.4-2
- sourcetools 0.1.6
- sp 1.2-7
- spatial 7.3-11
- splines 3.4.1
- stats4 3.4.1
- stats 3.4.1
- stringi 1.1.6
- stringr 1.2.0
- survival 2.41-3
- tcltk 3.4.1
- testRcppClass 0.1
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 2.0.0
- tibble 1.4.2
- tidyr 0.8.0
- tidyselect 0.2.3
- tools 3.4.1
- translations 3.4.1
- truncnorm 1.0-7
- tximport 1.6.0
- tximportData 1.6.0
- utf8 1.1.3
- utils 3.4.1
- viridis 0.5.0
- viridisLite 0.3.0
- vsn 3.46.0
- whisker 0.3-2
- windlgs 1.1.0
- withr 2.1.1
- xfun 0.1
- xml2 1.2.0
- xtable 1.8-2
- yaml 2.1.16
- zlibbioc 1.24.0
- ubuntu/adduser 3.113 nmu3ubuntu4
- ubuntu/apt 1.2.24
- ubuntu/autoconf 2.69-9
- ubuntu/automake 1:1.15-4ubuntu1
- ubuntu/autotools-dev 20150820.1
- ubuntu/base-files 9.4ubuntu4.5
- ubuntu/base-passwd 3.5.39
- ubuntu/bash 4.3-14ubuntu1.2
- ubuntu/binutils 2.26.1-1ubuntu1~16.04.6
- ubuntu/bsdutils 1:2.27.1-6ubuntu3.3
- ubuntu/build-essential 12.1ubuntu2
- ubuntu/bzip2-doc 1.0.6-8
- ubuntu/bzip2 1.0.6-8
- ubuntu/ca-certificates-java 20160321ubuntu1
- ubuntu/ca-certificates 20170717~16.04.1
- ubuntu/cmake-data 3.5.1-1ubuntu3
- ubuntu/cmake 3.5.1-1ubuntu3
- ubuntu/coreutils 8.25-2ubuntu3~16.04
- ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.6
- ubuntu/cpp 4:5.3.1-1ubuntu1
- ubuntu/curl 7.47.0-1ubuntu2.6
- ubuntu/dash 0.5.8-2.1ubuntu2
- ubuntu/dbus 1.10.6-1ubuntu3.3
- ubuntu/debconf 1.5.58ubuntu1
- ubuntu/debianutils 4.7
- ubuntu/default-jre-headless 2:1.8-56ubuntu2
- ubuntu/default-jre 2:1.8-56ubuntu2
- ubuntu/diffutils 1:3.3-3
- ubuntu/dpkg-dev 1.18.4ubuntu1.3
- ubuntu/dpkg 1.18.4ubuntu1.3
- ubuntu/e2fslibs 1.42.13-1ubuntu1
- ubuntu/e2fsprogs 1.42.13-1ubuntu1
- ubuntu/f2c 20100827-2
- ubuntu/fakeroot 1.20.2-1ubuntu1
- ubuntu/file 1:5.25-2ubuntu1
- ubuntu/findutils 4.6.0 git 20160126-2
- ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
- ubuntu/fontconfig 2.11.94-0ubuntu1.1
- ubuntu/fonts-dejavu-core 2.35-1
- ubuntu/fonts-dejavu-extra 2.35-1
- ubuntu/fonts-lato 2.0-1
- ubuntu/fonts-lmodern 2.004.5-1
- ubuntu/fort77 1.15-10
- ubuntu/ftp 0.17-33
- ubuntu/g -5 5.4.0-6ubuntu1~16.04.6
- ubuntu/g 4:5.3.1-1ubuntu1
- ubuntu/gcc-5-base 5.4.0-6ubuntu1~16.04.6
- ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.6
- ubuntu/gcc-6-base 6.0.1-0ubuntu1
- ubuntu/gcc 4:5.3.1-1ubuntu1
- ubuntu/gfortran-5 5.4.0-6ubuntu1~16.04.6
- ubuntu/gfortran 4:5.3.1-1ubuntu1
- ubuntu/ghc 7.10.3-7
- ubuntu/git-man 1:2.7.4-0ubuntu1.3
- ubuntu/git 1:2.7.4-0ubuntu1.3
- ubuntu/gnupg 1.4.20-1ubuntu3.1
- ubuntu/gpgv 1.4.20-1ubuntu3.1
- ubuntu/grep 2.25-1~16.04.1
- ubuntu/gzip 1.6-4ubuntu1
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- ubuntu/hostname 3.16ubuntu2
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- ubuntu/init-system-helpers 1.29ubuntu4
- ubuntu/init 1.29ubuntu4
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- ubuntu/iproute2 4.3.0-1ubuntu3.16.04.3
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- ubuntu/javascript-common 11
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- ubuntu/libblas-common 3.6.0-2ubuntu2
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- ubuntu/libblkid1 2.27.1-6ubuntu3.3
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- ubuntu/libbz2-1.0 1.0.6-8
- ubuntu/libbz2-dev 1.0.6-8
- ubuntu/libc-bin 2.23-0ubuntu10
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- ubuntu/libc6-dev 2.23-0ubuntu10
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- ubuntu/libcairo-gobject2 1.14.6-1
- ubuntu/libcairo-script-interpreter2 1.14.6-1
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- ubuntu/libcairo2 1.14.6-1
- ubuntu/libcap-ng0 0.7.7-1
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- ubuntu/libwind0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
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- ubuntu/ncurses-base 6.0 20160213-1ubuntu1
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- ubuntu/netbase 5.3
- ubuntu/openjdk-8-jre-headless 8u151-b12-0ubuntu0.16.04.2
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- ubuntu/openssl 1.0.2g-1ubuntu4.10
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- ubuntu/python-all-dev 2.7.11-1
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- ubuntu/readline-common 6.3-8ubuntu2
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- ubuntu/ruby2.3 2.3.1-2~16.04.6
- ubuntu/ruby 1:2.3.0 1
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- ubuntu/sensible-utils 0.0.9
- ubuntu/sgml-base 1.26 nmu4ubuntu1
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- ubuntu/systemd-sysv 229-4ubuntu21
- ubuntu/systemd 229-4ubuntu21
- ubuntu/sysv-rc 2.88dsf-59.3ubuntu2
- ubuntu/sysvinit-utils 2.88dsf-59.3ubuntu2
- ubuntu/t1utils 1.39-2
- ubuntu/tar 1.28-2.1ubuntu0.1
- ubuntu/tcl8.6 8.6.5 dfsg-2
- ubuntu/tcl 8.6.0 9
- ubuntu/tcpd 7.6.q-25
- ubuntu/tex-common 6.04
- ubuntu/texlive-base 2015.20160320-1ubuntu0.1
- ubuntu/texlive-binaries 2015.20160222.37495-1
- ubuntu/texlive-latex-base-doc 2015.20160320-1ubuntu0.1
- ubuntu/texlive-latex-base 2015.20160320-1ubuntu0.1
- ubuntu/tk8.6 8.6.5-1
- ubuntu/tk 8.6.0 9
- ubuntu/tzdata 2017c-0ubuntu0.16.04
- ubuntu/ubuntu-keyring 2012.05.19
- ubuntu/ucf 3.0036
- ubuntu/unzip 6.0-20ubuntu1
- ubuntu/util-linux 2.27.1-6ubuntu3.3
- ubuntu/wget 1.17.1-1ubuntu1.3
- ubuntu/x11-common 1:7.7 13ubuntu3
- ubuntu/x11-utils 7.7 3
- ubuntu/x11-xserver-utils 7.7 7
- ubuntu/x11proto-core-dev 7.0.31-1~ubuntu16.04.2
- ubuntu/x11proto-input-dev 2.3.1-1
- ubuntu/x11proto-kb-dev 1.0.7-0ubuntu1
- ubuntu/x11proto-render-dev 2:0.11.1-2
- ubuntu/x11proto-xext-dev 7.3.0-1
- ubuntu/xauth 1:1.0.9-1ubuntu2
- ubuntu/xbitmaps 1.1.1-2
- ubuntu/xdg-user-dirs 0.15-2ubuntu6
- ubuntu/xdg-utils 1.1.1-1ubuntu1.16.04.1
- ubuntu/xml-core 0.13 nmu2
- ubuntu/xorg-sgml-doctools 1:1.11-1
- ubuntu/xterm 322-1ubuntu1
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- ubuntu/xz-utils 5.1.1alpha 20120614-2ubuntu2
- ubuntu/zip 3.0-11
- ubuntu/zlib1g-dev 1:1.2.8.dfsg-2ubuntu4.1
- ubuntu/zlib1g 1:1.2.8.dfsg-2ubuntu4.1
- bigdecimal 1.2.8
- did_you_mean 1.0.0
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- json 1.8.3
- minitest 5.8.4
- net-telnet 0.1.1
- power_assert 0.2.7
- psych 2.0.17
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- rdoc 4.2.1
- test-unit 3.1.7
- Butterfly:Butterfly *
- Jaligner:Jaligner *
- US_export_policy:US_export_policy *
- charsets:charsets *
- cisd-jhdf5:cisd-jhdf5 *
- cldrdata:cldrdata *
- com.sun:jce 1.8.0_151
- com.sun:sunec 1.8.0_151
- com.sun:sunjce_provider 1.8.0_151
- com.sun:sunpkcs11 1.8.0_151
- commons-io:commons-io 1.4
- commons-lang:commons-lang 2.4
- dnsns:dnsns *
- icedtea-sound:icedtea-sound *
- jaccess:jaccess *
- java-getopt:java-getopt 1.0.13
- jbzip2:jbzip2 0.9
- jsse:jsse 1.8.0_151
- local_policy:local_policy *
- localedata:localedata *
- management-agent:management-agent *
- nashorn:nashorn 1.8.0_151-8u151-b12-0ubuntu0.16.04.2-b12
- net.sf.jung:jung-algorithms 2.0.1
- net.sf.jung:jung-api 2.0.1
- net.sf.jung:jung-graph-impl 2.0.1
- org.apache.commons.collections15:collections-generic 4.01
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.eclipse.jdt.internal.jarinjarloader.JarRsrcLoader:ExitTester *
- org.usadellab.trimmomatic.Trimmomatic:trimmomatic 0.36
- resources:resources 1.8.0_151
- rt:rt 1.8.0_151
- sam:sam 1.103
- zipfs:zipfs 1.8.0_151