Ecosyste.ms: Docker
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codechenx/mice_aspergillus_infection_lung_project : latest
Latest release: over 1 year ago - 11 downloads - 427 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.60.2
- BH 1.81.0-1
- Biobase 2.58.0
- BiocBaseUtils 1.0.0
- BiocGenerics 0.44.0
- BiocManager 1.30.20
- BiocParallel 1.32.6
- BiocVersion 3.16.0
- Biostrings 2.66.0
- ComplexHeatmap 2.14.0
- DBI 1.1.3
- DESeq2 1.38.3
- DEoptimR 1.0-12
- DT 0.27
- DelayedArray 0.24.0
- FEAST 0.1.0
- Formula 1.2-5
- GenomeInfoDb 1.34.9
- GenomeInfoDbData 1.2.9
- GenomicRanges 1.50.2
- GetoptLong 1.0.5
- GlobalOptions 0.1.2
- Hmisc 5.0-1
- IRanges 2.32.0
- KEGGREST 1.38.0
- KernSmooth 2.23-20
- MASS 7.3-58.3
- Matrix 1.5-4
- MatrixCorrelation 0.10.0
- MatrixGenerics 1.10.0
- MatrixModels 0.5-1
- MultiAssayExperiment 1.24.0
- MultiDataSet 1.26.0
- R6 2.5.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.12
- RSQLite 2.3.1
- RSpectra 0.16-1
- RVenn 1.1.0
- Rcpp 1.0.10
- RcppArmadillo 0.12.2.0.0
- RcppDist 0.1.1
- RcppEigen 0.3.3.9.3
- RcppParallel 5.1.7
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- Rhdf5lib 1.20.0
- Rmosek 1.3.5
- Rtsne 0.16
- S4Vectors 0.36.2
- SparseM 1.81
- SummarizedExperiment 1.28.0
- TSP 1.2-4
- Wrench 1.16.0
- XML 3.99-0.14
- XVector 0.38.0
- abind 1.4-5
- ade4 1.7-22
- annotate 1.76.0
- ape 5.7-1
- askpass 1.1
- backports 1.4.1
- bama 1.3.0
- base64enc 0.1-3
- base64url 1.4
- base 4.2.3
- bayesm 3.1-5
- biomformat 1.26.0
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.4
- boot 1.3-28.1
- brew 1.0-8
- brio 1.1.3
- broom 1.0.4
- bslib 0.4.2
- ca 0.71.1
- caTools 1.18.2
- cachem 1.0.7
- callr 3.7.3
- calibrate 1.7.7
- car 3.1-2
- carData 3.0-5
- cellranger 1.1.0
- checkmate 2.1.0
- circlize 0.4.15
- class 7.3-21
- classInt 0.4-9
- cli 3.6.1
- clipr 0.8.0
- clue 0.3-64
- cluster 2.1.4
- clustermq 0.8.95.5
- coda 0.19-4
- codetools 0.2-19
- colorspace 2.1-0
- commonmark 1.9.0
- compiler 4.2.3
- compositions 2.0-6
- conflicted 1.2.0
- corrplot 0.92
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- credentials 1.3.2
- crosstalk 1.2.0
- curl 5.0.0
- data.table 1.14.8
- datasets 4.2.3
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- dbplyr 2.3.2
- decontam 1.18.0
- desc 1.4.2
- devtools 2.4.5
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- digest 0.6.31
- doParallel 1.0.17
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- downlit 0.4.2
- dplyr 1.1.1
- dtplyr 1.3.1
- e1071 1.7-13
- ellipsis 0.3.2
- energy 1.7-11
- evaluate 0.20
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- fontawesome 0.5.1
- forcats 1.0.0
- foreach 1.5.2
- foreign 0.8-84
- formatR 1.14
- freebird 1.0
- fs 1.6.1
- furrr 0.3.1
- futile.logger 1.4.3
- futile.options 1.0.1
- future.callr 0.8.1
- future 1.32.0
- gargle 1.4.0
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- gclus 1.3.2
- geneplotter 1.76.0
- generics 0.1.3
- genlasso 1.6.1
- gert 1.9.2
- ggVennDiagram 1.2.2
- ggalluvial 0.12.5
- ggfittext 0.10.0
- ggforce 0.4.1
- ggiraph 0.8.7
- ggnetwork 0.5.12
- ggplot2 3.4.2
- ggpubr 0.6.0
- ggraph 2.1.0
- ggrepel 0.9.3
- ggsci 3.0.0
- ggsignif 0.6.4
- ggtext 0.1.2
- ggthemes 4.2.4
- gh 1.4.0
- gitcreds 0.1.2
- gittargets 0.0.6
- glmnet 4.1-7
- globals 0.16.2
- glue 1.6.2
- googledrive 2.1.0
- googlesheets4 1.1.0
- gplots 3.1.3
- grDevices 4.2.3
- graphics 4.2.3
- graphlayouts 0.8.4
- grid 4.2.3
- gridExtra 2.3
- gridtext 0.1.5
- gsl 2.1-8
- gtable 0.3.3
- gtools 3.9.4
- haven 2.5.2
- hdi 0.1-9
- hdmed 1.0.0
- here 1.0.1
- highr 0.10
- hms 1.1.3
- htmlTable 2.4.1
- htmltools 0.5.5
- htmlwidgets 1.6.2
- httpuv 1.6.9
- httr2 0.2.2
- httr 1.4.5
- ids 1.0.1
- igraph 1.4.2
- ini 0.3.1
- insight 0.19.1
- isoband 0.2.7
- iterators 1.0.14
- jpeg 0.1-10
- jquerylib 0.1.4
- jsonlite 1.8.4
- knitr 1.42
- labeling 0.4.2
- lambda.r 1.2.4
- lars 1.3
- later 1.3.0
- lattice 0.21-8
- lazyeval 0.2.2
- lifecycle 1.0.3
- limma 3.54.2
- linprog 0.9-4
- listenv 0.9.0
- littler 0.3.18
- lme4 1.1-32
- locfit 1.5-9.7
- lpSolve 5.6.18
- lubridate 1.9.2
- magrittr 2.0.3
- markdown 1.6
- matrixStats 0.63.0
- mediation 4.5.0
- memoise 2.0.1
- metagenomeSeq 1.40.0
- methods 4.2.3
- mgcv 1.8-42
- microViz 0.11.0
- microbiome 1.20.0
- mime 0.12
- miniUI 0.1.1.1
- minqa 1.2.5
- mnormt 2.1.1
- modelr 0.1.11
- multtest 2.54.0
- munsell 0.5.0
- mvtnorm 1.1-3
- mvtnormAPI 1.0-0
- narray 0.5.1
- ncvreg 3.13.0
- network 1.18.1
- nlme 3.1-162
- nloptr 2.0.3
- nnet 7.3-18
- numDeriv 2016.8-1.1
- openssl 2.0.6
- org.testing.db 0.1
- packrat 0.9.1
- parallel 4.2.3
- parallelly 1.35.0
- patchwork 1.1.3.9000
- pbkrtest 0.5.2
- permute 0.9-7
- pheatmap 1.0.12
- phyloseq 1.42.0
- phylosmith 1.0.7
- picante 1.8.2
- pillar 1.9.0
- pixmap 0.4-12
- pkgbuild 1.4.0
- pkgconfig 2.0.3
- pkgdown 2.0.7
- pkgload 1.3.2
- plogr 0.2.0
- plotly 4.10.1
- plotrix 3.8-2
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- polynom 1.4-1
- pracma 2.4.2
- praise 1.0.0
- prettyunits 1.1.1
- processx 3.8.1
- profvis 0.3.7
- progress 1.2.2
- promises 1.2.0.1
- proxy 0.4-27
- ps 1.7.5
- psych 2.3.3
- purrr 1.0.1
- qap 0.1-2
- qqman 0.1.8
- quantreg 5.95
- quarto 1.2
- ragg 1.2.5
- rappdirs 0.3.3
- rcmdcheck 1.4.0
- readr 2.1.4
- readxl 1.4.2
- registry 0.5-1
- rematch2 2.1.2
- rematch 1.0.1
- remotes 2.4.2
- reprex 2.0.2
- reshape2 1.4.4
- reticulate 1.28
- rhdf5 2.42.1
- rhdf5filters 1.10.1
- rjson 0.2.21
- rlang 1.1.0
- rmarkdown 2.21
- robustbase 0.95-1
- ropls 1.30.0
- roxygen2 7.2.3
- rpart 4.1.19
- rprojroot 2.0.3
- rsconnect 0.8.29
- rstatix 0.7.2
- rstudioapi 0.14
- rversions 2.1.2
- rvest 1.0.3
- s2 1.1.2
- sandwich 3.0-2
- sass 0.4.5
- scales 1.2.1
- scalreg 1.0.1
- selectr 0.4-2
- seriation 1.4.2
- sessioninfo 1.2.2
- sf 1.0-12
- shades 1.4.0
- shape 1.4.6
- shiny 1.7.4
- showtext 0.9-5
- showtextdb 3.0
- sjlabelled 1.2.0
- sjmisc 2.8.9
- sna 2.7-1
- snow 0.4-4
- sourcetools 0.1.7-1
- sp 1.6-0
- spatial 7.3-16
- splines 4.2.3
- statnet.common 4.8.0
- stats4 4.2.3
- stats 4.2.3
- stringi 1.7.12
- stringr 1.5.0
- survival 3.5-5
- sys 3.4.1
- sysfonts 0.8.8
- systemfonts 1.0.4
- tarchetypes 0.7.5
- targets 0.14.3
- tcltk 4.2.3
- tensorA 0.36.2
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.1.7
- textshaping 0.3.6
- tibble 3.2.1
- tidygraph 1.2.3
- tidyr 1.3.0
- tidyselect 1.2.0
- tidyverse 2.0.0
- timechange 0.2.0
- tinytex 0.45
- tools 4.2.3
- translations 4.2.3
- tweenr 2.0.2
- tzdb 0.3.0
- umap 0.2.10.0
- units 0.8-1
- urlchecker 1.0.1
- usethis 2.1.6
- utf8 1.2.3
- utils 4.2.3
- uuid 1.1-0
- vctrs 0.6.2
- vegan 2.6-4
- viridis 0.6.2
- viridisLite 0.4.1
- visNetwork 2.1.2
- vroom 1.6.1
- waldo 0.4.0
- whisker 0.4.1
- withr 2.5.0
- wk 0.7.2
- xfun 0.38
- xml2 1.3.3
- xopen 1.0.0
- xtable 1.8-4
- yaml 2.3.7
- yulab.utils 0.0.6
- zip 2.3.0
- zlibbioc 1.44.0
- zoo 1.8-12
- github.com/evanw/esbuild v0.0.0-20220830001118-78a1e00b2e69
- golang.org/x/sys v0.0.0-20220715151400-c0bba94af5f8
- stdlib 1.19
- bootstrap-accessibility-plugin 1.0.6
- bootstrap-colorpicker 3.4.0
- bootstrap-sass 3.4.1
- bootstrap 4.6.0
- bootstrap 5.2.2
- bootswatch 3.4.1
- bootswatch 4.6.0
- bootswatch 5.2.2
- PyYAML 6.0
- argparse 1.2.1
- joblib 1.2.0
- numpy 1.24.3
- pandas 2.0.0
- pip 22.0.2
- python-dateutil 2.8.2
- pytz 2023.3
- scikit-learn 1.2.2
- scipy 1.10.1
- setuptools 44.1.1
- setuptools 59.6.0
- six 1.16.0
- threadpoolctl 3.1.0
- tzdata 2023.3
- wheel 0.37.1
- wsgiref 0.1.2