codechenx/mice_aspergillus_infection_lung_project : latest

Latest release: over 2 years ago - 95 downloads - 427 dependencies

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Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.60.2
BH 1.81.0-1
Biobase 2.58.0
BiocBaseUtils 1.0.0
BiocGenerics 0.44.0
BiocManager 1.30.20
BiocParallel 1.32.6
BiocVersion 3.16.0
Biostrings 2.66.0
ComplexHeatmap 2.14.0
DBI 1.1.3
DESeq2 1.38.3
DEoptimR 1.0-12
DT 0.27
DelayedArray 0.24.0
FEAST 0.1.0
Formula 1.2-5
GenomeInfoDb 1.34.9
GenomeInfoDbData 1.2.9
GenomicRanges 1.50.2
GetoptLong 1.0.5
GlobalOptions 0.1.2
Hmisc 5.0-1
IRanges 2.32.0
KEGGREST 1.38.0
KernSmooth 2.23-20
MASS 7.3-58.3
Matrix 1.5-4
MatrixCorrelation 0.10.0
MatrixGenerics 1.10.0
MatrixModels 0.5-1
MultiAssayExperiment 1.24.0
MultiDataSet 1.26.0
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
RSQLite 2.3.1
RSpectra 0.16-1
RVenn 1.1.0
Rcpp 1.0.10
RcppArmadillo 0.12.2.0.0
RcppDist 0.1.1
RcppEigen 0.3.3.9.3
RcppParallel 5.1.7
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.2.2
Rhdf5lib 1.20.0
Rmosek 1.3.5
Rtsne 0.16
S4Vectors 0.36.2
SparseM 1.81
SummarizedExperiment 1.28.0
TSP 1.2-4
Wrench 1.16.0
XML 3.99-0.14
XVector 0.38.0
abind 1.4-5
ade4 1.7-22
annotate 1.76.0
ape 5.7-1
askpass 1.1
backports 1.4.1
bama 1.3.0
base64enc 0.1-3
base64url 1.4
base 4.2.3
bayesm 3.1-5
biomformat 1.26.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
broom 1.0.4
bslib 0.4.2
ca 0.71.1
caTools 1.18.2
cachem 1.0.7
callr 3.7.3
calibrate 1.7.7
car 3.1-2
carData 3.0-5
cellranger 1.1.0
checkmate 2.1.0
circlize 0.4.15
class 7.3-21
classInt 0.4-9
cli 3.6.1
clipr 0.8.0
clue 0.3-64
cluster 2.1.4
clustermq 0.8.95.5
coda 0.19-4
codetools 0.2-19
colorspace 2.1-0
commonmark 1.9.0
compiler 4.2.3
compositions 2.0-6
conflicted 1.2.0
corrplot 0.92
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 5.0.0
data.table 1.14.8
datasets 4.2.3
datawizard 0.7.1
dbplyr 2.3.2
decontam 1.18.0
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.31
doParallel 1.0.17
docopt 0.7.1
downlit 0.4.2
dplyr 1.1.1
dtplyr 1.3.1
e1071 1.7-13
ellipsis 0.3.2
energy 1.7-11
evaluate 0.20
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
fontawesome 0.5.1
forcats 1.0.0
foreach 1.5.2
foreign 0.8-84
formatR 1.14
freebird 1.0
fs 1.6.1
furrr 0.3.1
futile.logger 1.4.3
futile.options 1.0.1
future.callr 0.8.1
future 1.32.0
gargle 1.4.0
gcdnet 1.0.6
gclus 1.3.2
geneplotter 1.76.0
generics 0.1.3
genlasso 1.6.1
gert 1.9.2
ggVennDiagram 1.2.2
ggalluvial 0.12.5
ggfittext 0.10.0
ggforce 0.4.1
ggiraph 0.8.7
ggnetwork 0.5.12
ggplot2 3.4.2
ggpubr 0.6.0
ggraph 2.1.0
ggrepel 0.9.3
ggsci 3.0.0
ggsignif 0.6.4
ggtext 0.1.2
ggthemes 4.2.4
gh 1.4.0
gitcreds 0.1.2
gittargets 0.0.6
glmnet 4.1-7
globals 0.16.2
glue 1.6.2
googledrive 2.1.0
googlesheets4 1.1.0
gplots 3.1.3
grDevices 4.2.3
graphics 4.2.3
graphlayouts 0.8.4
grid 4.2.3
gridExtra 2.3
gridtext 0.1.5
gsl 2.1-8
gtable 0.3.3
gtools 3.9.4
haven 2.5.2
hdi 0.1-9
hdmed 1.0.0
here 1.0.1
highr 0.10
hms 1.1.3
htmlTable 2.4.1
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.6.9
httr2 0.2.2
httr 1.4.5
ids 1.0.1
igraph 1.4.2
ini 0.3.1
insight 0.19.1
isoband 0.2.7
iterators 1.0.14
jpeg 0.1-10
jquerylib 0.1.4
jsonlite 1.8.4
knitr 1.42
labeling 0.4.2
lambda.r 1.2.4
lars 1.3
later 1.3.0
lattice 0.21-8
lazyeval 0.2.2
lifecycle 1.0.3
limma 3.54.2
linprog 0.9-4
listenv 0.9.0
littler 0.3.18
lme4 1.1-32
locfit 1.5-9.7
lpSolve 5.6.18
lubridate 1.9.2
magrittr 2.0.3
markdown 1.6
matrixStats 0.63.0
mediation 4.5.0
memoise 2.0.1
metagenomeSeq 1.40.0
methods 4.2.3
mgcv 1.8-42
microViz 0.11.0
microbiome 1.20.0
mime 0.12
miniUI 0.1.1.1
minqa 1.2.5
mnormt 2.1.1
modelr 0.1.11
multtest 2.54.0
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
narray 0.5.1
ncvreg 3.13.0
network 1.18.1
nlme 3.1-162
nloptr 2.0.3
nnet 7.3-18
numDeriv 2016.8-1.1
openssl 2.0.6
org.testing.db 0.1
packrat 0.9.1
parallel 4.2.3
parallelly 1.35.0
patchwork 1.1.3.9000
pbkrtest 0.5.2
permute 0.9-7
pheatmap 1.0.12
phyloseq 1.42.0
phylosmith 1.0.7
picante 1.8.2
pillar 1.9.0
pixmap 0.4-12
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2
plogr 0.2.0
plotly 4.10.1
plotrix 3.8-2
plyr 1.8.8
png 0.1-8
polyclip 1.10-4
polynom 1.4-1
pracma 2.4.2
praise 1.0.0
prettyunits 1.1.1
processx 3.8.1
profvis 0.3.7
progress 1.2.2
promises 1.2.0.1
proxy 0.4-27
ps 1.7.5
psych 2.3.3
purrr 1.0.1
qap 0.1-2
qqman 0.1.8
quantreg 5.95
quarto 1.2
ragg 1.2.5
rappdirs 0.3.3
rcmdcheck 1.4.0
readr 2.1.4
readxl 1.4.2
registry 0.5-1
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.2
reshape2 1.4.4
reticulate 1.28
rhdf5 2.42.1
rhdf5filters 1.10.1
rjson 0.2.21
rlang 1.1.0
rmarkdown 2.21
robustbase 0.95-1
ropls 1.30.0
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rsconnect 0.8.29
rstatix 0.7.2
rstudioapi 0.14
rversions 2.1.2
rvest 1.0.3
s2 1.1.2
sandwich 3.0-2
sass 0.4.5
scales 1.2.1
scalreg 1.0.1
selectr 0.4-2
seriation 1.4.2
sessioninfo 1.2.2
sf 1.0-12
shades 1.4.0
shape 1.4.6
shiny 1.7.4
showtext 0.9-5
showtextdb 3.0
sjlabelled 1.2.0
sjmisc 2.8.9
sna 2.7-1
snow 0.4-4
sourcetools 0.1.7-1
sp 1.6-0
spatial 7.3-16
splines 4.2.3
statnet.common 4.8.0
stats4 4.2.3
stats 4.2.3
stringi 1.7.12
stringr 1.5.0
survival 3.5-5
sys 3.4.1
sysfonts 0.8.8
systemfonts 1.0.4
tarchetypes 0.7.5
targets 0.14.3
tcltk 4.2.3
tensorA 0.36.2
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.7
textshaping 0.3.6
tibble 3.2.1
tidygraph 1.2.3
tidyr 1.3.0
tidyselect 1.2.0
tidyverse 2.0.0
timechange 0.2.0
tinytex 0.45
tools 4.2.3
translations 4.2.3
tweenr 2.0.2
tzdb 0.3.0
umap 0.2.10.0
units 0.8-1
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.3
utils 4.2.3
uuid 1.1-0
vctrs 0.6.2
vegan 2.6-4
viridis 0.6.2
viridisLite 0.4.1
visNetwork 2.1.2
vroom 1.6.1
waldo 0.4.0
whisker 0.4.1
withr 2.5.0
wk 0.7.2
xfun 0.38
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
yulab.utils 0.0.6
zip 2.3.0
zlibbioc 1.44.0
zoo 1.8-12

bash 5.1.16
python 2.7.18
python 3.10.6

github.com/evanw/esbuild v0.0.0-20220830001118-78a1e00b2e69
golang.org/x/sys v0.0.0-20220715151400-c0bba94af5f8
stdlib 1.19

jrt-fs:jrt-fs 11.0.18
org.debian.security.UpdateCertificates:ca-certificates-java *

bootstrap-accessibility-plugin 1.0.6
bootstrap-colorpicker 3.4.0
bootstrap-sass 3.4.1
bootstrap 4.6.0
bootstrap 5.2.2
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.2.2

PyYAML 6.0
argparse 1.2.1
joblib 1.2.0
numpy 1.24.3
pandas 2.0.0
pip 22.0.2
python-dateutil 2.8.2
pytz 2023.3
scikit-learn 1.2.2
scipy 1.10.1
setuptools 44.1.1
setuptools 59.6.0
six 1.16.0
threadpoolctl 3.1.0
tzdata 2023.3
wheel 0.37.1
wsgiref 0.1.2

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codechenx/mice_aspergillus_infection_lung_project : latest

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