lemoniada/test : pipeline

Latest release: over 3 years ago - 162 downloads - 1,181 dependencies

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnnotationDbi 1.60.0
BH 1.78.0-0
Biobase 2.58.0
BiocFileCache 2.6.0
BiocGenerics 0.44.0
BiocIO 1.8.0
BiocManager 1.30.19
BiocParallel 1.32.5
BiocVersion 3.16.0
Biostrings 2.66.0
DBI 1.1.3
DelayedArray 0.24.0
FNN 1.1.3.1
GenomeInfoDb 1.34.6
GenomeInfoDbData 1.2.9
GenomicAlignments 1.34.0
GenomicFeatures 1.50.3
GenomicRanges 1.50.2
HDF5Array 1.26.0
IRanges 2.32.0
KEGGREST 1.38.0
KernSmooth 2.23-20
MASS 7.3-58.1
MOFA2 1.8.0
Matrix 1.5-1
Matrix 1.5-3
MatrixGenerics 1.10.0
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.9
RSQLite 2.2.20
Rcpp 1.0.9
RcppAnnoy 0.0.20
RcppArmadillo 0.11.4.2.1
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.2.0
Rhdf5lib 1.20.0
Rhtslib 2.0.0
Rsamtools 2.14.0
Rtsne 0.16
S4Vectors 0.36.1
SummarizedExperiment 1.28.0
XML 3.99-0.13
XVector 0.38.0
askpass 1.1
assertthat 0.2.1
base64enc 0.1-3
base 4.2.2
basilisk.utils 1.10.0
basilisk 1.10.2
biomaRt 2.54.0
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.3
boot 1.3-28
brew 1.0-8
brio 1.1.3
bslib 0.4.2
cachem 1.0.6
callr 3.7.3
class 7.3-20
cli 3.6.0
clipr 0.8.0
cluster 2.1.3
codetools 0.2-18
colorspace 2.0-3
commonmark 1.8.1
compiler 4.2.2
corrplot 0.92
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
curl 4.3.3
data.table 1.14.6
datasets 4.2.2
dbplyr 2.2.1
desc 1.4.2
diffobj 0.3.5
digest 0.6.31
dir.expiry 1.6.0
docopt 0.7.1
downlit 0.4.2
dplyr 1.0.10
dqrng 0.3.0
ellipsis 0.3.2
evaluate 0.19
fansi 1.0.3
farver 2.1.1
fastmap 1.1.0
filelock 1.0.2
fontawesome 0.4.0
forcats 0.5.2
foreign 0.8-83
formatR 1.13
fs 1.5.2
futile.logger 1.4.3
futile.options 1.0.1
generics 0.1.3
ggplot2 3.4.0
ggrepel 0.9.2
gh 1.3.1
gitcreds 0.1.2
glue 1.6.2
grDevices 4.2.2
graphics 4.2.2
grid 4.2.2
gtable 0.3.1
harmony 0.1.1
here 1.0.1
highr 0.10
hms 1.1.2
htmltools 0.5.4
htmlwidgets 1.6.1
httpuv 1.6.7
httr 1.4.4
ini 0.3.1
irlba 2.3.5.1
isoband 0.2.7
jquerylib 0.1.4
jsonlite 1.8.4
knitr 1.41
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-45
lifecycle 1.0.3
littler 0.3.17
magrittr 2.0.3
matrixStats 0.63.0
memoise 2.0.1
methods 4.2.2
mgcv 1.8-41
mime 0.12
miniUI 0.1.1.1
munsell 0.5.0
nlme 3.1-158
nnet 7.3-18
openssl 2.0.5
org.testing.db 0.1
parallel 4.2.2
pheatmap 1.0.12
pillar 1.8.1
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgload 1.3.2
plogr 0.2.0
plyr 1.8.8
plyranges 1.18.0
png 0.1-8
praise 1.0.0
prettyunits 1.1.1
processx 3.8.0
profvis 0.3.7
progress 1.2.2
promises 1.2.0.1
ps 1.7.2
purrr 1.0.1
rappdirs 0.3.3
rcmdcheck 1.4.0
rematch2 2.1.2
remotes 2.4.2
reshape2 1.4.4
restfulr 0.0.15
reticulate 1.27
rhdf5 2.42.0
rhdf5filters 1.10.0
rjson 0.2.21
rlang 1.0.6
rmarkdown 2.19
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rstudioapi 0.14
rtracklayer 1.58.0
rversions 2.1.2
sass 0.4.4
scales 1.2.1
sessioninfo 1.2.2
shiny 1.7.4
sitmo 2.0.2
snow 0.4-4
son.of.basilisk 0.99.0
sourcetools 0.1.7
spatial 7.3-15
splines 4.2.2
stats4 4.2.2
stats 4.2.2
stringi 1.7.12
stringr 1.5.0
survival 3.4-0
sys 3.4.1
tcltk 4.2.2
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.6
tibble 3.1.8
tidyr 1.2.1
tidyselect 1.2.0
tinytex 0.43
tools 4.2.2
translations 4.2.2
urlchecker 1.0.1
utf8 1.2.2
utils 4.2.2
uwot 0.1.14
vctrs 0.5.1
viridisLite 0.4.1
waldo 0.4.0
whisker 0.4.1
withr 2.5.0
xfun 0.36
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.6
zip 2.2.2
zlibbioc 1.44.0

java 1.8.0_332-b09
python 3.8.10

PySocks 1.7.1
Sphinx 4.2.0
argcomplete 2.0.0
argparse 1.2.1
attrs 22.1.0
black 22.1.0
bleach 5.0.1
cachetools 5.2.0
certifi 2022.6.15
cffi 1.15.1
charset-normalizer 2.1.1
click 8.0.4
colorlog 6.7.0
commonmark 0.9.1
coverage 4.4.2
cryptography 2.8
cryptography 35.0.0
cryptography 36.0.2
cryptography 37.0.4
distlib 0.3.6
docutils 0.19
filelock 3.8.0
flake8 3.4.1
flake8 3.9.2
flake8 4.0.1
flaky 3.6.1
flask 0.10.1
future 0.16.0
gcp-devrel-py-tools 0.0.15
gcp-docuploader 0.6.3
gcp-releasetool 1.8.7
google-api-core 2.8.2
google-auth 2.11.0
google-cloud-compute 1.5.1
google-cloud-core 2.3.2
google-cloud-storage 2.5.0
google-crc32c 1.3.0
google-resumable-media 2.3.3
googleapis-common-protos 1.56.4
httpbin 0.7.0
httplib2 0.20.4
idna 3.3
importlib-metadata 4.12.0
jaraco-classes 3.2.2
jeepney 0.8.0
jinja2 3.1.2
keyring 23.9.0
markupsafe 2.1.1
mock 2.0.0
mock 3.0.5
more-itertools 8.14.0
mypy 0.931
nox 2022.8.7
packaging 21.3
pkginfo 1.8.3
platformdirs 2.5.2
protobuf 3.20.1
py 1.11.0
pyasn1-modules 0.2.8
pyasn1 0.4.4
pyasn1 0.4.8
pycparser 2.21
pygments 2.13.0
pyjwt 2.4.0
pyopenssl 22.0.0
pyparsing 3.0.9
pyperclip 1.8.2
pytest-cov 2.12.1
pytest-cov 2.5.1
pytest-forked 0.2
pytest-forked 1.3.0
pytest-freezegun 0.4.2
pytest-httpbin 0.3.0
pytest-httpbin 1.0.0
pytest-mock 2.0.0
pytest-randomly 1.2.1
pytest-randomly 1.2.3
pytest-timeout 1.2.0
pytest-timeout 1.3.4
pytest-timeout 1.4.2
pytest-xdist 1.20.0
pytest-xdist 1.34.0
pytest 3.2.1
pytest 4.6.11
pytest 4.6.9
pytest 6.1.2
pytest 6.2.5
pytest 7.1.2
python-dateutil 2.8.1
python-dateutil 2.8.2
readme-renderer 37.0
requests-toolbelt 0.9.1
requests 2.28.1
rfc3986 2.0.0
rich 12.5.1
rsa 3.1.4
rsa 4.7.2
rsa 4.9
secretstorage 3.3.3
setuptools 65.2.0
simplejson 3.5.2
simplejson 3.6.5
six 1.10.0
six 1.16.0
tornado 5.1.1
tornado 6.0.3
tox 3.5.2
trustme 0.5.3
twine 4.0.1
typing-extensions 4.3.0
urllib3 1.26.12
virtualenv 20.16.4
webencodings 0.5.1
wheel 0.37.1
win-inet-pton 1.1.0
zipp 3.8.1

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