Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : deb : debian/samtools
Explore the latest package usage data for debian/samtools in the deb ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 72
Total downloads: 788,069
More details on packages.ecosyste.ms - JSON
biocontainers/samtools v1.9-4-deb_cv1
Tools for manipulating next-generation sequencing data
- version: 1.9-4
- arch: amd64
- distro: debian-10
qdidiscoveryservices/anacoda3_pylibs latest
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/bio-tradis v1.4.1dfsg-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/ariba v2.13.3ds-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/bioperl v1.7.2-3-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/bioperl-run v1.7.2-4-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/gbrowse-calign v2.56dfsg-4b1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/circlator v1.5.5-3-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/gbrowse-data v2.56dfsg-4-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/unicycler v0.4.7dfsg-2-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/cct v20170919dfsg-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/gbrowse v2.56dfsg-4-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/sga v0.10.15-4-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/grinder v0.5.4-5-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/spades v3.13.0dfsg2-2-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/giira v0.0.20140625-2-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/pbbamtools v0.19.0dfsg-4-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/pymummer v0.10.3-2-deb-py3_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/srst2 v0.2.0-6-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/murasaki v1.68.6-8b1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/velvetoptimiser v2.2.6-2-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/seqsero v1.0.1dfsg-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/murasaki-mpi v1.68.6-8b1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/pbsuite v15.8.24dfsg-3-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/pbhoney v15.8.24dfsg-3-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/stacks v2.2dfsg-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/murasaki-common v1.68.6-8-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/paleomix v1.2.13.3-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/psortb v3.0.6dfsg-1b1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/stacks-web v2.2dfsg-1-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/roary v3.12.0dfsg-2-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
biocontainers/smalr v1.1dfsg-2-deb_cv1
- version: 1.9-4
- arch: amd64
- distro: debian-10
qdidiscoveryservices/crispresso2-biopy 2.2.12-test
- version: 1.9-4
- arch: amd64
- distro: debian-10
qdidiscoveryservices/bwa_samtools_biobambam2 latest
- version: 1.9-4
- arch: amd64
- distro: debian-10
qdidiscoveryservices/trust4_pip v1.0.7
- version: 1.9-4
- arch: amd64
- distro: debian-10
qdidiscoveryservices/crispresso2 2.1.3.1
- version: 1.9-4
- arch: amd64
- distro: debian-10
qdidiscoveryservices/anaconda_biopy latest
- version: 1.11-1
- arch: amd64
- distro: debian-11
schmitzr1984/bwa latest
- version: 1.11-1
- arch: amd64
- distro: debian-11
doejgi/synbioqc-pbj 3.3.1
- version: 1.16.1-1
- arch: amd64
- distro: debian-12
doejgi/synbioqc-dual_barcode 1.3.7
version of SynBioQC PacBio sequence validation pipeline for highly similar synthetic constructs
- version: 1.16.1-1
- arch: amd64
- distro: debian-12
biocontainers/predictprotein v1.1.07-2-deb_cv1
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
dmiller15/sequenza 3.0.0
- version: 1.9-5
- arch: amd64
- distro: debian
kcapd/wings-genomics latest
WINGS workflow system with software for genomics operations.
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
biocontainers/smrtanalysis v020161126-deb_cv1
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
doejgi/synbioqc-env 6.1.1
- version: 1.16.1-1
- arch: amd64
- distro: debian-12
vanessa/cseq latest
a sequence analysis workflow for low-input nanopore sequencing
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
qdidiscoveryservices/sentieon-plus 202010.03
Sentieon with additional tools (e.g. SAMtools)
- version: 1.9-4
- arch: amd64
- distro: debian-10
vanessa/example.scif latest
scientific filesystem container builder example
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
kcapd/wings-genomics-full latest
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
dhspence/gtc2vcf latest
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
chriswyatt/bioseqio latest
- version: 1.11-1
- arch: amd64
- distro: debian-11
theosanderson/deeperseq latest
- version: 1.11-1
- arch: amd64
- distro: debian-11
lemoniada/test pipeline
- version: 1.9-4
- arch: amd64
- distro: debian-10
davelabhub/msi 122722a
- version: 1.13-4
- arch: amd64
- distro: debian
gene110/connor 0.6.1
- version: 1.9-4
- arch: amd64
- distro: debian-10
amirshams/spipe 1.0.7
- version: 1.11-1
- arch: amd64
- distro: debian-11
sagnikbanerjee15/repeatmasker 4.1.2
- version: 1.3.1-3
- arch: amd64
- distro: debian-9
trestlebiosciences/mukherjee 1.0
- version: 1.9-4
- arch: amd64
- distro: debian-10
npcooley/nmdctest01 1.0
- version: 1.17-1
- arch: amd64
- distro: debian-12
hieutran2907/ichorcna_samtools v1
- version: 1.11-1
- arch: amd64
- distro: debian
zhiliz/debian12-tools 0.0.2
- version: 1.16.1-1
- arch: amd64
- distro: debian-12
salvacasani/methylctools latest
- version: 1.9-4
- arch: amd64
- distro: debian-10
polumechanos/task_qc_rna merge-pkr
- version: 1.17-1
- arch: amd64
- distro: debian-12
netraa/griffin_nucleosome_profiling 2.0
- version: 1.11-1
- arch: amd64
- distro: debian-11
shahcompbio/igcaller latest
- version: 1.9-4
- arch: amd64
- distro: debian-10
seglh/sqvd v1.3.0-RC4
Git repo: https://git.kingspm.uk/KingsPM/sqvd
- version: 1.9-4
- arch: amd64
- distro: debian-10
cgeorgescu/pvactools devel
- version: 1.9-4
- arch: amd64
- distro: debian-10
astrand/testinvpath abc
- version: 1.16.1-1
- arch: amd64
- distro: debian-12
39dj29dl2d9l2/vec-ven 13
- version: 1.16.1-1
- arch: amd64
- distro: debian-12
emna20/ditector v1
- version: 1.11-1
- arch: amd64
- distro: debian-11
kubran/odcf_aceseqcalling v6
- version: 1.9-4
- arch: amd64
- distro: debian-10