Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
Package Usage : deb : debian/libhts2
Explore the latest package usage data for debian/libhts2 in the deb ecosystem, including detailed information on package dependencies and their usage.
Total dependents: 84
Total downloads: 2,136,284
More details on packages.ecosyste.ms - JSON
biocontainers/bcftools v1.9-1-deb_cv1
variant calling and manipulating VCFs and BCFs
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/samtools v1.9-4-deb_cv1
Tools for manipulating next-generation sequencing data
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
qdidiscoveryservices/anacoda3_pylibs latest
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pysam v0.15.2ds-2-deb-py3_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/cyvcf2 v0.10.4-1-deb-py3_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/kineticstools v0.6.1git20180425.27a1878-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/freebayes v1.2.0-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbh5tools v0.8.0git20170929.58d54ffdfsg-1-deb-py2_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbgenomicconsensus v2.3.2-5-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbalign v0.3.2-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/bio-eagle v2.4.1-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/augustus v3.3.2dfsg-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/bio-tradis v1.4.1dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/ariba v2.13.3ds-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/arden v1.0-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/bioperl v1.7.2-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/bioperl-run v1.7.2-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/blasr v5.3.2dfsg-1.1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/cnvkit v0.9.5-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/unanimity v3.3.0dfsg-2.1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/gbrowse-calign v2.56dfsg-4b1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/crac v2.5.0dfsg-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/fastqtl v2.184dfsg-6b1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/circlator v1.5.5-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/gbrowse-data v2.56dfsg-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/unicycler v0.4.7dfsg-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/gasic v0.0.r19-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/cct v20170919dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/gbrowse v2.56dfsg-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/fitgcp v0.0.20150429-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/delly v0.8.1-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/sga v0.10.15-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/grinder v0.5.4-5-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/hinge v0.5.0-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/spades v3.13.0dfsg2-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/giira v0.0.20140625-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbbamtools v0.19.0dfsg-4-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pymummer v0.10.3-2-deb-py3_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/srst2 v0.2.0-6-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/murasaki v1.68.6-8b1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/nanopolish v0.11.0-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbcommand v1.1.1-1-deb-py2_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbdagcon v0.3git20161121.0000000ds-1.1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbcore v1.6.5dfsg-1-deb-py2_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbbarcode v0.8.0-5-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbbanana v15.8.24dfsg-3-deb-py2_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/nanook v1.33dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/velvetoptimiser v2.2.6-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/rsem v1.3.1dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/seqsero v1.0.1dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbjelly v15.8.24dfsg-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/murasaki-mpi v1.68.6-8b1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbsuite v15.8.24dfsg-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbhoney v15.8.24dfsg-3-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/stacks v2.2dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/murasaki-common v1.68.6-8-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pbsuite-utils v15.8.24dfsg-3-deb-py2_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pybedtools v0.8.0-1-deb-py3_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/pybedtools-bin v0.8.0-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/segemehl v0.3.4-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/paleomix v1.2.13.3-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/psortb v3.0.6dfsg-1b1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/stacks-web v2.2dfsg-1-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/roary v3.12.0dfsg-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/smalr v1.1dfsg-2-deb_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
biocontainers/sqt v0.8.0-3-deb-py3_cv1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
qdidiscoveryservices/crispresso2-biopy 2.2.12-test
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
qdidiscoveryservices/bwa_samtools_biobambam2 latest
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
qdidiscoveryservices/trust4_pip v1.0.7
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
nextgenusfs/funannotate-slim v1.8.15
Base funannotate image (no databases)
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
qdidiscoveryservices/crispresso2 2.1.3.1
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
dmiller15/sequenza 3.0.0
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian
qdidiscoveryservices/sentieon-plus 202010.03
Sentieon with additional tools (e.g. SAMtools)
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
ddiazescandon/funannotate 1.8.15
nextgenusfs/funannotate:latest with eukaryta db, phyml for dn/ds and a conda installation
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
lemoniada/test pipeline
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
gene110/connor 0.6.1
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
yingxiaomai/genomeassess v0
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
trestlebiosciences/mukherjee 1.0
- version: 1.9-11
- arch: amd64
- upstream: htslib
- distro: debian-10
salvacasani/methylctools latest
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
shahcompbio/igcaller latest
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
seglh/sqvd v1.3.0-RC4
Git repo: https://git.kingspm.uk/KingsPM/sqvd
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
cgeorgescu/pvactools devel
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10
kubran/odcf_aceseqcalling v6
- version: 1.9-12~deb10u1
- arch: amd64
- upstream: htslib
- distro: debian-10