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crpeters/r-methylkit : 4.2.1

Latest release: almost 2 years ago - 12 downloads - 383 dependencies

JSON

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
BH 1.78.0-0
BSgenome 1.66.2
Biobase 2.58.0
BiocGenerics 0.44.0
BiocIO 1.8.0
BiocManager 1.30.19
BiocParallel 1.32.5
BiocVersion 3.16.0
Biostrings 2.66.0
Cairo 1.6-0
ComplexUpset 1.3.3
DBI 1.1.3
DSS 2.46.0
DT 0.26
DelayedArray 0.24.0
DelayedMatrixStats 1.20.0
FactoMineR 2.6
GGally 2.1.2
GenomeInfoDb 1.34.6
GenomeInfoDbData 1.2.9
GenomicAlignments 1.34.0
GenomicRanges 1.50.2
HDF5Array 1.26.0
HDInterval 0.2.2
IRanges 2.32.0
KernSmooth 2.23-20
Lahman 10.0-1
MASS 7.3-57
Matrix 1.4-1
Matrix 1.5-1
MatrixGenerics 1.10.0
MatrixModels 0.5-1
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.0
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.9
RMariaDB 1.2.2
RPostgres 1.4.4
RSQLite 2.2.18
Rcpp 1.0.9
RcppArmadillo 0.11.4.0.1
RcppEigen 0.3.3.9.2
Rhdf5lib 1.20.0
Rhtslib 2.0.0
Rsamtools 2.14.0
Rttf2pt1 1.3.11
S4Vectors 0.36.1
SparseM 1.81
SummarizedExperiment 1.28.0
XML 3.99-0.11
XVector 0.38.0
abind 1.4-5
ape 5.6-2
aplot 0.1.8
arrow 10.0.0
ash 1.0-15
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.2.1
bbmle 1.0.25
bdsmatrix 1.3-6
beachmat 2.14.0
beachtest 1.0.0
beeswarm 0.4.0
bit64 4.0.5
bit 4.0.4
bitops 1.0-7
blob 1.2.3
boot 1.3-28
brew 1.0-8
brio 1.1.3
broom 1.0.1
bslib 0.4.0
bsseq 1.34.0
cachem 1.0.6
callr 3.7.2
car 3.1-1
carData 3.0-5
cellranger 1.1.0
class 7.3-20
classInt 0.4-8
cli 3.4.1
clipr 0.8.0
cluster 2.1.3
coda 0.19-4
codetools 0.2-18
colorspace 2.0-3
colourpicker 1.1.1
commonmark 1.8.1
compiler 4.2.1
corrplot 0.92
cowplot 1.1.1
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 4.3.3
data.table 1.14.4
datasets 4.2.1
dbplyr 2.2.1
dendextend 1.16.0
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.30
directlabels 2021.1.13
distributional 0.3.1
docopt 0.7.1
downlit 0.4.2
dplyr 1.0.10
dtplyr 1.2.2
duckdb 0.5.1
e1071 1.7-12
ellipse 0.4.3
ellipsis 0.3.2
emdbook 1.3.12
emmeans 1.8.2
estimability 1.4.1
evaluate 0.17
extrafont 0.18
extrafontdb 1.0
factoextra 1.0.7
fansi 1.0.3
farver 2.1.1
fastmap 1.1.0
fastseg 1.44.0
flashClust 1.01-2
fontawesome 0.4.0
forcats 0.5.2
foreign 0.8-82
formatR 1.12
fs 1.5.2
fst 0.9.8
fstcore 0.9.12
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.2.1
generics 0.1.3
geomtextpath 0.1.1
gert 1.9.1
getopt 1.20.3
ggExtra 0.10.0
ggTimeSeries 1.0.2
ggalluvial 0.12.3
ggalt 0.4.0
gganimate 1.0.8
ggarchery 0.4.1
ggbeeswarm 0.6.0
ggbump 0.1.0
ggcorrplot 0.1.4
ggdensity 0.1.1
ggdist 3.2.0
ggfittext 0.9.1
ggforce 0.4.1
ggfun 0.0.7
gggenes 0.4.1
ggh4x 0.2.2
gghalves 0.1.3
ggheatmap 2.2
ggimg 0.1.2
ggmuller 0.5.4
ggpattern 1.0.0
ggplot2 3.3.6
ggplotify 0.1.0
ggpointdensity 0.1.0
ggpubr 0.4.0
ggraph 2.1.0
ggrastr 1.0.1
ggrepel 0.9.1
ggridges 0.5.4
ggsci 2.9
ggside 0.2.1
ggsignif 0.6.4
ggtext 0.1.2
ggupset 0.3.0
gh 1.3.1
gitcreds 0.1.2
glue 1.6.2
googledrive 2.0.0
googlesheets4 1.0.1
grDevices 4.2.1
graphics 4.2.1
graphlayouts 0.8.3
grid 4.2.1
gridExtra 2.3
gridGraphics 0.5-1
gridpattern 1.0.1
gridtext 0.1.5
gtable 0.3.1
gtools 3.9.3
haven 2.5.1
highr 0.9
hms 1.1.2
htmltools 0.5.3
htmlwidgets 1.5.4
httpuv 1.6.6
httr 1.4.4
ids 1.0.1
igraph 1.3.5
ini 0.3.1
isoband 0.2.6
jpeg 0.1-9
jquerylib 0.1.4
jsonlite 1.8.3
knitr 1.40
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.20-45
lazyeval 0.2.2
leaps 3.1
lifecycle 1.0.3
limma 3.54.0
littler 0.3.16
lme4 1.1-30
locfit 1.5-9.6
lubridate 1.8.0
magrittr 2.0.3
maps 3.4.0
markdown 1.2
matrixStats 0.62.0
mclust 5.4.10
memoise 2.0.1
methods 4.2.1
methylKit 1.24.0
mgcv 1.8-40
mime 0.12
miniUI 0.1.1.1
minqa 1.2.5
modelr 0.1.9
morebeach 1.0.0
morebeachtests 1.0.0
multcompView 0.1-8
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-157
nloptr 2.0.3
nnet 7.3-17
numDeriv 2016.8-1.1
nycflights13 1.0.2
openssl 2.0.4
optparse 1.7.3
parallel 4.2.1
patchwork 1.1.2
pbkrtest 0.5.1
permute 0.9-7
pillar 1.8.1
pkgbuild 1.3.1
pkgconfig 2.0.3
pkgdown 2.0.6
pkgload 1.3.0
plogr 0.2.0
plotly 4.10.0
plyr 1.8.7
png 0.1-7
polyclip 1.10-4
polynom 1.4-1
praise 1.0.0
prettyunits 1.1.1
processx 3.8.0
profvis 0.3.7
progress 1.2.2
proj4 1.0-11
promises 1.2.0.1
proxy 0.4-27
ps 1.7.2
purrr 0.3.5
quadprog 1.5-8
quantreg 5.94
qvalue 2.30.0
ragg 1.2.4
rappdirs 0.3.3
rcmdcheck 1.4.0
readr 2.1.3
readxl 1.4.1
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
reprex 2.0.2
reshape2 1.4.4
reshape 0.8.9
restfulr 0.0.15
rhdf5 2.42.0
rhdf5filters 1.10.0
rjson 0.2.21
rlang 1.0.6
rmarkdown 2.17
roxygen2 7.2.1
rpart 4.1.16
rprojroot 2.0.3
rstatix 0.7.0
rstudioapi 0.14
rtracklayer 1.58.0
rversions 2.1.2
rvest 1.0.3
s2 1.1.0
sass 0.4.2
scales 1.2.1
scatterplot3d 0.3-42
selectr 0.4-2
sessioninfo 1.2.2
sf 1.0-8
shades 1.4.0
shiny 1.7.3
shinyjs 2.1.0
snow 0.4-4
sourcetools 0.1.7
sparseMatrixStats 1.10.0
spatial 7.3-15
splines 4.2.1
stats4 4.2.1
stats 4.2.1
stringi 1.7.8
stringr 1.4.1
survival 3.3-1
sys 3.4.1
systemfonts 1.0.4
tcltk 4.2.1
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.5
textshaping 0.3.6
tibble 3.1.8
tidygraph 1.2.2
tidyr 1.2.1
tidyselect 1.2.0
tidyverse 1.3.2
tinytex 0.42
tools 4.2.1
translations 4.2.1
tweenr 2.0.2
tzdb 0.3.0
units 0.8-0
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.2
utils 4.2.1
uuid 1.1-0
vctrs 0.5.0
vipor 0.4.5
viridis 0.6.2
viridisLite 0.4.1
vroom 1.6.0
waldo 0.4.0
whisker 0.4
withr 2.5.0
wk 0.7.0
xfun 0.34
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.6
yulab.utils 0.0.5
zip 2.2.2
zlibbioc 1.44.0

bash 5.0.17
python 2.7.18
python 3.8.10

github.com/evanw/esbuild v0.0.0-20220511215310-7abb7d8496d4
golang.org/x/sys v0.0.0-20210908233432-aa78b53d3365
stdlib 1.18.1

bootstrap-accessibility-plugin 1.0.6
bootstrap-colorpicker 3.4.0
bootstrap-sass 3.4.1
bootstrap 4.6.0
bootstrap 5.1.3
bootswatch 3.4.1
bootswatch 4.6.0
bootswatch 5.1.3

argparse 1.2.1
setuptools 44.0.0
wsgiref 0.1.2