dhspence/docker-dss : latest

Latest release: almost 6 years ago - 409 downloads - 1,127 dependencies

JSON

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnnotationDbi 1.48.0
BH 1.72.0-3
BSgenome 1.54.0
Biobase 2.46.0
BiocFileCache 1.10.2
BiocGenerics 0.32.0
BiocManager 1.30.10
BiocParallel 1.20.1
BiocVersion 3.10.1
Biostrings 2.54.0
DBI 1.1.0
DSS 2.34.0
DelayedArray 0.12.2
DelayedMatrixStats 1.8.0
FField 0.1.0
Formula 1.2-3
GenVisR 1.18.1
GenomeInfoDb 1.22.0
GenomeInfoDbData 1.2.2
GenomicAlignments 1.22.1
GenomicFeatures 1.38.2
GenomicRanges 1.38.0
HDF5Array 1.14.3
Hmisc 4.3-1
IRanges 2.20.2
MASS 7.3-51.5
Matrix 1.2-18
R.methodsS3 1.8.0
R.oo 1.23.0
R.utils 2.9.2
R6 2.4.1
RColorBrewer 1.1-2
RCurl 1.98-1.1
RSQLite 2.2.0
Rcpp 1.0.3
Rhdf5lib 1.8.0
Rhtslib 1.18.1
Rsamtools 2.2.3
S4Vectors 0.24.3
SummarizedExperiment 1.16.1
VariantAnnotation 1.32.0
XML 3.99-0.3
XVector 0.26.0
acepack 1.4.1
ape 5.3
askpass 1.1
assertthat 0.2.1
backports 1.1.5
base64enc 0.1-3
base 3.6.0
beachmat 2.2.1
beachtest 1.0.0
biomaRt 2.42.0
bit64 0.9-7
bit 1.1-15.2
bitops 1.0-6
blob 1.2.1
broom 0.5.5
bsseq 1.22.0
callr 3.4.2
cellranger 1.1.0
checkmate 2.0.0
cli 2.0.2
clipr 0.7.0
cluster 2.1.0
colorspace 1.4-1
compiler 3.6.0
crayon 1.3.4
curl 4.3
data.table 1.12.8
datasets 3.6.0
dbplyr 1.4.2
desc 1.2.0
digest 0.6.25
docopt 0.6.1
dplyr 0.8.5
ellipsis 0.3.0
evaluate 0.14
fansi 0.4.1
farver 2.0.3
forcats 0.5.0
foreign 0.8-76
formatR 1.7
fs 1.3.2
futile.logger 1.4.3
futile.options 1.0.1
generics 0.0.2
ggplot2 3.3.0
glue 1.3.2
grDevices 3.6.0
graphics 3.6.0
grid 3.6.0
gridExtra 2.3
gtable 0.3.0
gtools 3.8.1
haven 2.2.0
highr 0.8
hms 0.5.3
htmlTable 1.13.3
htmltools 0.4.0
htmlwidgets 1.5.1
httr 1.4.1
isoband 0.2.0
jpeg 0.1-8.1
jsonlite 1.6.1
knitr 1.28
labeling 0.3
lambda.r 1.2.4
lattice 0.20-40
latticeExtra 0.6-29
lifecycle 0.2.0
limma 3.42.2
littler 0.3.9
locfit 1.5-9.1
lubridate 1.7.4
magrittr 1.5
markdown 1.1
matrixStats 0.56.0
memoise 1.1.0
memuse 4.1-0
methods 3.6.0
mgcv 1.8-31
mime 0.9
modelr 0.1.6
morebeach 1.0.0
munsell 0.5.0
nlme 3.1-145
nnet 7.3-13
openssl 1.4.1
org.testing.db 0.1
parallel 3.6.0
permute 0.9-5
pillar 1.4.3
pinfsc50 1.1.0
pkgbuild 1.0.6
pkgconfig 2.0.3
pkgload 1.0.2
plogr 0.2.0
plotrix 3.7-7
plyr 1.8.6
png 0.1-7
praise 1.0.0
prettyunits 1.1.1
processx 3.4.2
progress 1.2.2
ps 1.3.2
purrr 0.3.3
rappdirs 0.3.1
readr 1.3.1
readxl 1.3.1
rematch 1.0.1
reprex 0.3.0
reshape2 1.4.3
rhdf5 2.30.1
rlang 0.4.5
rmarkdown 2.1
rpart 4.1-15
rprojroot 1.3-2
rstudioapi 0.11
rtracklayer 1.46.0
rvest 0.3.5
scales 1.1.0
selectr 0.4-2
snow 0.4-3
splines 3.6.0
stats4 3.6.0
stats 3.6.0
stringi 1.4.6
stringr 1.4.0
survival 3.1-11
sys 3.3
tcltk 3.6.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 2.3.2
tibble 2.1.3
tidyr 1.0.2
tidyselect 1.0.0
tidyverse 1.3.0
tinytex 0.20
tools 3.6.0
translations 3.6.0
utf8 1.1.4
utils 3.6.0
vcfR 1.10.0
vctrs 0.2.4
vegan 2.5-6
viridis 0.5.1
viridisLite 0.3.0
whisker 0.4
withr 2.1.2
xfun 0.12
xml2 1.2.5
yaml 2.2.1
zlibbioc 1.32.0

ubuntu/adduser 3.113 nmu3ubuntu4
ubuntu/adwaita-icon-theme 3.18.0-2ubuntu3.1
ubuntu/ant 1.9.6-1ubuntu1.1
ubuntu/apt 1.2.32
ubuntu/base-files 9.4ubuntu4.11
ubuntu/base-passwd 3.5.39
ubuntu/bash-completion 1:2.1-4.2ubuntu1.1
ubuntu/bash 4.3-14ubuntu1.4
ubuntu/bc 1.06.95-9build1
ubuntu/bind9-host 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/binutils 2.26.1-1ubuntu1~16.04.8
ubuntu/bsdutils 1:2.27.1-6ubuntu3.10
ubuntu/build-essential 12.1ubuntu2
ubuntu/bzip2 1.0.6-8ubuntu0.2
ubuntu/ca-certificates-java 20160321ubuntu1
ubuntu/ca-certificates 20170717~16.04.2
ubuntu/coreutils 8.25-2ubuntu3~16.04
ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.12
ubuntu/cpp 4:5.3.1-1ubuntu1
ubuntu/cracklib-runtime 2.9.2-1ubuntu1
ubuntu/curl 7.47.0-1ubuntu2.14
ubuntu/dash 0.5.8-2.1ubuntu2
ubuntu/dconf-gsettings-backend 0.24.0-2
ubuntu/dconf-service 0.24.0-2
ubuntu/debconf 1.5.58ubuntu2
ubuntu/debianutils 4.7
ubuntu/default-jdk-headless 2:1.8-56ubuntu2
ubuntu/default-jdk 2:1.8-56ubuntu2
ubuntu/default-jre-headless 2:1.8-56ubuntu2
ubuntu/default-jre 2:1.8-56ubuntu2
ubuntu/diffutils 1:3.3-3
ubuntu/dpkg-dev 1.18.4ubuntu1.6
ubuntu/dpkg 1.18.4ubuntu1.6
ubuntu/e2fslibs 1.42.13-1ubuntu1.2
ubuntu/e2fsprogs 1.42.13-1ubuntu1.2
ubuntu/emacs-goodies-el 35.12ubuntu2
ubuntu/emacs24-bin-common 24.5 1-6ubuntu1.1
ubuntu/emacs24-common-non-dfsg 24.4 1-2
ubuntu/emacs24-common 24.5 1-6ubuntu1.1
ubuntu/emacs24 24.5 1-6ubuntu1.1
ubuntu/emacs 46.1
ubuntu/emacsen-common 2.0.8
ubuntu/evince-common 3.18.2-1ubuntu4.6
ubuntu/evince 3.18.2-1ubuntu4.6
ubuntu/file 1:5.25-2ubuntu1.3
ubuntu/findutils 4.6.0 git 20160126-2
ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
ubuntu/fontconfig 2.11.94-0ubuntu1.1
ubuntu/fonts-cabin 1.5-2
ubuntu/fonts-comfortaa 2.003-1
ubuntu/fonts-crosextra-caladea 20130214-1
ubuntu/fonts-crosextra-carlito 20130920-1
ubuntu/fonts-dejavu-core 2.35-1
ubuntu/fonts-dejavu-extra 2.35-1
ubuntu/fonts-ebgaramond-extra 0.015 git20130628-3
ubuntu/fonts-ebgaramond 0.015 git20130628-3
ubuntu/fonts-font-awesome 4.5.0~dfsg-1
ubuntu/fonts-freefont-otf 20120503-4
ubuntu/fonts-freefont-ttf 20120503-4
ubuntu/fonts-gfs-artemisia 1.1-5
ubuntu/fonts-gfs-complutum 1.1-6
ubuntu/fonts-gfs-didot 1.1-6
ubuntu/fonts-gfs-neohellenic 1.1-6
ubuntu/fonts-gfs-olga 1.1-5
ubuntu/fonts-gfs-solomos 1.1-5
ubuntu/fonts-junicode 0.7.8-2
ubuntu/fonts-lato 2.0-1
ubuntu/fonts-linuxlibertine 5.3.0-2
ubuntu/fonts-lobster 2.0-2
ubuntu/fonts-lobstertwo 2.0-2
ubuntu/fonts-oflb-asana-math 000.907-6
ubuntu/fonts-roboto-hinted 2:0~20160106-1ubuntu0.1
ubuntu/fonts-sil-gentium-basic 1.1-7
ubuntu/fonts-sil-gentium 20081126:1.03-1
ubuntu/fonts-sil-gentiumplus 5.000-1
ubuntu/fonts-stix 1.1.1-4
ubuntu/fonts-texgyre 20150923-1
ubuntu/g -5 5.4.0-6ubuntu1~16.04.12
ubuntu/g 4:5.3.1-1ubuntu1
ubuntu/gawk 1:4.1.3 dfsg-0.1
ubuntu/gcc-5-base 5.4.0-6ubuntu1~16.04.12
ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.12
ubuntu/gcc-6-base 6.0.1-0ubuntu1
ubuntu/gcc 4:5.3.1-1ubuntu1
ubuntu/gconf-service-backend 3.2.6-3ubuntu6
ubuntu/gconf-service 3.2.6-3ubuntu6
ubuntu/gconf2-common 3.2.6-3ubuntu6
ubuntu/geoip-database 20160408-1
ubuntu/gfortran-5 5.4.0-6ubuntu1~16.04.12
ubuntu/gfortran 4:5.3.1-1ubuntu1
ubuntu/gir1.2-freedesktop 1.46.0-3ubuntu1
ubuntu/gir1.2-glib-2.0 1.46.0-3ubuntu1
ubuntu/gir1.2-pango-1.0 1.38.1-1
ubuntu/git-man 1:2.7.4-0ubuntu1.7
ubuntu/git 1:2.7.4-0ubuntu1.7
ubuntu/glib-networking-common 2.48.2-1~ubuntu16.04.1
ubuntu/glib-networking-services 2.48.2-1~ubuntu16.04.1
ubuntu/glib-networking 2.48.2-1~ubuntu16.04.1
ubuntu/gnupg 1.4.20-1ubuntu3.3
ubuntu/gpgv 1.4.20-1ubuntu3.3
ubuntu/grep 2.25-1~16.04.1
ubuntu/gsettings-desktop-schemas 3.18.1-1ubuntu1
ubuntu/gsfonts 1:8.11 urwcyr1.0.7~pre44-4.2ubuntu1
ubuntu/gstreamer1.0-plugins-base 1.8.3-1ubuntu0.3
ubuntu/gzip 1.6-4ubuntu1
ubuntu/hicolor-icon-theme 0.15-0ubuntu1.1
ubuntu/hostname 3.16ubuntu2
ubuntu/humanity-icon-theme 0.6.10.1
ubuntu/icu-devtools 55.1-7ubuntu0.4
ubuntu/imagemagick-common 8:6.8.9.9-7ubuntu5.15
ubuntu/init-system-helpers 1.29ubuntu4
ubuntu/init 1.29ubuntu4
ubuntu/initscripts 2.88dsf-59.3ubuntu2
ubuntu/insserv 1.14.0-5ubuntu3
ubuntu/iso-codes 3.65-1
ubuntu/java-common 0.56ubuntu2
ubuntu/ldap-utils 2.4.42 dfsg-2ubuntu3.7
ubuntu/less 481-2.1ubuntu0.2
ubuntu/libacl1 2.2.52-3
ubuntu/libapparmor1 2.10.95-0ubuntu2.11
ubuntu/libapt-pkg5.0 1.2.32
ubuntu/libarchive13 3.1.2-11ubuntu0.16.04.8
ubuntu/libasan2 5.4.0-6ubuntu1~16.04.12
ubuntu/libasn1-8-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libasound2-data 1.1.0-0ubuntu1
ubuntu/libasound2 1.1.0-0ubuntu1
ubuntu/libasyncns0 0.8-5build1
ubuntu/libatk-bridge2.0-0 2.18.1-2ubuntu1
ubuntu/libatk1.0-0 2.18.0-1
ubuntu/libatk1.0-data 2.18.0-1
ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.12
ubuntu/libatspi2.0-0 2.18.3-4ubuntu1
ubuntu/libattr1 1:2.4.47-2
ubuntu/libaudit-common 1:2.4.5-1ubuntu2.1
ubuntu/libaudit1 1:2.4.5-1ubuntu2.1
ubuntu/libavahi-client3 0.6.32~rc dfsg-1ubuntu2.3
ubuntu/libavahi-common-data 0.6.32~rc dfsg-1ubuntu2.3
ubuntu/libavahi-common3 0.6.32~rc dfsg-1ubuntu2.3
ubuntu/libbasicobjects0 0.5.0-1
ubuntu/libbind9-140 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/libblas-common 3.6.0-2ubuntu2
ubuntu/libblas-dev 3.6.0-2ubuntu2
ubuntu/libblas3 3.6.0-2ubuntu2
ubuntu/libblkid1 2.27.1-6ubuntu3.10
ubuntu/libboost-filesystem1.58.0 1.58.0 dfsg-5ubuntu3.1
ubuntu/libboost-system1.58.0 1.58.0 dfsg-5ubuntu3.1
ubuntu/libbsd0 0.8.2-1ubuntu0.1
ubuntu/libbz2-1.0 1.0.6-8ubuntu0.2
ubuntu/libbz2-dev 1.0.6-8ubuntu0.2
ubuntu/libc-ares2 1.10.0-3ubuntu0.2
ubuntu/libc-bin 2.23-0ubuntu11
ubuntu/libc-dev-bin 2.23-0ubuntu11
ubuntu/libc6-dev 2.23-0ubuntu11
ubuntu/libc6 2.23-0ubuntu11
ubuntu/libcairo-gobject2 1.14.6-1
ubuntu/libcairo-script-interpreter2 1.14.6-1
ubuntu/libcairo2-dev 1.14.6-1
ubuntu/libcairo2 1.14.6-1
ubuntu/libcap2-bin 1:2.24-12
ubuntu/libcap2 1:2.24-12
ubuntu/libcapnp-0.5.3 0.5.3-2ubuntu1.1
ubuntu/libcc1-0 5.4.0-6ubuntu1~16.04.12
ubuntu/libcdparanoia0 3.10.2 debian-11
ubuntu/libcilkrts5 5.4.0-6ubuntu1~16.04.12
ubuntu/libcollection4 0.5.0-1
ubuntu/libcolord2 1.2.12-1ubuntu1
ubuntu/libcomerr2 1.42.13-1ubuntu1.2
ubuntu/libcrack2 2.9.2-1ubuntu1
ubuntu/libcroco3 0.6.11-1
ubuntu/libcryptsetup4 2:1.6.6-5ubuntu2.1
ubuntu/libcups2 2.1.3-4ubuntu0.10
ubuntu/libcupsfilters1 1.8.3-2ubuntu3.5
ubuntu/libcupsimage2 2.1.3-4ubuntu0.10
ubuntu/libcurl3-gnutls 7.47.0-1ubuntu2.14
ubuntu/libcurl3 7.47.0-1ubuntu2.14
ubuntu/libcurl4-openssl-dev 7.47.0-1ubuntu2.14
ubuntu/libdatrie1 0.2.10-2
ubuntu/libdb5.3 5.3.28-11ubuntu0.2
ubuntu/libdbus-1-3 1.10.6-1ubuntu3.5
ubuntu/libdbus-glib-1-2 0.106-1
ubuntu/libdconf1 0.24.0-2
ubuntu/libdebconfclient0 0.198ubuntu1
ubuntu/libdevmapper1.02.1 2:1.02.110-1ubuntu10
ubuntu/libdhash1 0.5.0-1
ubuntu/libdjvulibre-text 3.5.27.1-5ubuntu0.1
ubuntu/libdjvulibre21 3.5.27.1-5ubuntu0.1
ubuntu/libdns162 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/libdpkg-perl 1.18.4ubuntu1.6
ubuntu/libdrm-amdgpu1 2.4.91-2~16.04.1
ubuntu/libdrm-common 2.4.91-2~16.04.1
ubuntu/libdrm-intel1 2.4.91-2~16.04.1
ubuntu/libdrm-nouveau2 2.4.91-2~16.04.1
ubuntu/libdrm-radeon1 2.4.91-2~16.04.1
ubuntu/libdrm2 2.4.91-2~16.04.1
ubuntu/libedit2 3.1-20150325-1ubuntu2
ubuntu/libegl1-mesa 18.0.5-0ubuntu0~16.04.1
ubuntu/libelf1 0.165-3ubuntu1.2
ubuntu/libepoxy0 1.3.1-1ubuntu0.16.04.2
ubuntu/liberror-perl 0.17-1.2
ubuntu/libevdocument3-4 3.18.2-1ubuntu4.6
ubuntu/libevview3-3 3.18.2-1ubuntu4.6
ubuntu/libexpat1-dev 2.1.0-7ubuntu0.16.04.5
ubuntu/libexpat1 2.1.0-7ubuntu0.16.04.5
ubuntu/libfdisk1 2.27.1-6ubuntu3.10
ubuntu/libffi6 3.2.1-4
ubuntu/libfftw3-double3 3.3.4-2ubuntu1
ubuntu/libflac8 1.3.1-4
ubuntu/libfontconfig1-dev 2.11.94-0ubuntu1.1
ubuntu/libfontconfig1 2.11.94-0ubuntu1.1
ubuntu/libfontenc1 1:1.1.3-1
ubuntu/libfreetype6-dev 2.6.1-0.1ubuntu2.4
ubuntu/libfreetype6 2.6.1-0.1ubuntu2.4
ubuntu/libfribidi0 0.19.7-1
ubuntu/libgbm1 18.0.5-0ubuntu0~16.04.1
ubuntu/libgcc-5-dev 5.4.0-6ubuntu1~16.04.12
ubuntu/libgcc1 1:6.0.1-0ubuntu1
ubuntu/libgconf-2-4 3.2.6-3ubuntu6
ubuntu/libgcrypt20 1.6.5-2ubuntu0.6
ubuntu/libgd3 2.1.1-4ubuntu0.16.04.11
ubuntu/libgdbm3 1.8.3-13.1
ubuntu/libgdk-pixbuf2.0-0 2.32.2-1ubuntu1.6
ubuntu/libgdk-pixbuf2.0-common 2.32.2-1ubuntu1.6
ubuntu/libgeoip1 1.6.9-1
ubuntu/libgfortran-5-dev 5.4.0-6ubuntu1~16.04.12
ubuntu/libgfortran3 5.4.0-6ubuntu1~16.04.12
ubuntu/libgif7 5.1.4-0.3~16.04.1
ubuntu/libgirepository-1.0-1 1.46.0-3ubuntu1
ubuntu/libgl1-mesa-dri 18.0.5-0ubuntu0~16.04.1
ubuntu/libgl1-mesa-glx 18.0.5-0ubuntu0~16.04.1
ubuntu/libglapi-mesa 18.0.5-0ubuntu0~16.04.1
ubuntu/libglib2.0-0 2.48.2-0ubuntu4.4
ubuntu/libglib2.0-bin 2.48.2-0ubuntu4.4
ubuntu/libglib2.0-data 2.48.2-0ubuntu4.4
ubuntu/libglib2.0-dev 2.48.2-0ubuntu4.4
ubuntu/libgmp10 2:6.1.0 dfsg-2
ubuntu/libgnutls30 3.4.10-4ubuntu1.7
ubuntu/libgomp1 5.4.0-6ubuntu1~16.04.12
ubuntu/libgpg-error0 1.21-2ubuntu1
ubuntu/libgpm2 1.20.4-6.1
ubuntu/libgraphite2-3 1.3.10-0ubuntu0.16.04.1
ubuntu/libgs9-common 9.26~dfsg 0-0ubuntu0.16.04.12
ubuntu/libgs9 9.26~dfsg 0-0ubuntu0.16.04.12
ubuntu/libgssapi-krb5-2 1.13.2 dfsg-5ubuntu2.1
ubuntu/libgssapi3-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libkmod2 22-1ubuntu5.2
ubuntu/libgstreamer-plugins-base1.0-0 1.8.3-1ubuntu0.3
ubuntu/libgstreamer1.0-0 1.8.3-1~ubuntu0.1
ubuntu/libgtk-3-0 3.18.9-1ubuntu3.3
ubuntu/libgtk-3-bin 3.18.9-1ubuntu3.3
ubuntu/libgtk-3-common 3.18.9-1ubuntu3.3
ubuntu/libgtk2.0-0 2.24.30-1ubuntu1.16.04.2
ubuntu/libgtk2.0-common 2.24.30-1ubuntu1.16.04.2
ubuntu/libgxps2 0.2.3.2-1
ubuntu/libharfbuzz-dev 1.0.1-1ubuntu0.1
ubuntu/libharfbuzz-gobject0 1.0.1-1ubuntu0.1
ubuntu/libharfbuzz-icu0 1.0.1-1ubuntu0.1
ubuntu/libharfbuzz0b 1.0.1-1ubuntu0.1
ubuntu/libhcrypto4-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libheimbase1-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libheimntlm0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libhogweed4 3.2-1ubuntu0.16.04.1
ubuntu/libhx509-5-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libice-dev 2:1.0.9-1
ubuntu/libice6 2:1.0.9-1
ubuntu/libicu-dev 55.1-7ubuntu0.4
ubuntu/libicu55 55.1-7ubuntu0.4
ubuntu/libidn11 1.32-3ubuntu1.2
ubuntu/libijs-0.35 0.35-12
ubuntu/libini-config5 0.5.0-1
ubuntu/libipa-hbac0 1.13.4-1ubuntu1.15
ubuntu/libisc160 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/libisccc140 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/libisccfg140 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/libisl15 0.16.1-1
ubuntu/libitm1 5.4.0-6ubuntu1~16.04.12
ubuntu/libjbig-dev 2.1-3.1
ubuntu/libjbig0 2.1-3.1
ubuntu/libjbig2dec0 0.12 20150918-1ubuntu0.1
ubuntu/libjpeg-dev 8c-2ubuntu8
ubuntu/libjpeg-turbo8-dev 1.4.2-0ubuntu3.3
ubuntu/libjpeg-turbo8 1.4.2-0ubuntu3.3
ubuntu/libjpeg8-dev 8c-2ubuntu8
ubuntu/libjpeg8 8c-2ubuntu8
ubuntu/libjson-c2 0.11-4ubuntu2
ubuntu/libjson-glib-1.0-0 1.1.2-0ubuntu1
ubuntu/libjson-glib-1.0-common 1.1.2-0ubuntu1
ubuntu/libk5crypto3 1.13.2 dfsg-5ubuntu2.1
ubuntu/libkeyutils1 1.5.9-8ubuntu1
ubuntu/libkpathsea6 2015.20160222.37495-1ubuntu0.1
ubuntu/libkrb5-26-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libkrb5-3 1.13.2 dfsg-5ubuntu2.1
ubuntu/libkrb5support0 1.13.2 dfsg-5ubuntu2.1
ubuntu/liblcms2-2 2.6-3ubuntu2.1
ubuntu/libldap-2.4-2 2.4.42 dfsg-2ubuntu3.7
ubuntu/libldb1 2:1.1.24-1ubuntu3.1
ubuntu/libllvm6.0 1:6.0-1ubuntu2~16.04.1
ubuntu/liblockfile-bin 1.09-6ubuntu1
ubuntu/liblockfile1 1.09-6ubuntu1
ubuntu/liblqr-1-0 0.4.2-2
ubuntu/liblsan0 5.4.0-6ubuntu1~16.04.12
ubuntu/libltdl7 2.4.6-0.1
ubuntu/liblwres141 1:9.10.3.dfsg.P4-8ubuntu1.15
ubuntu/liblz4-1 0.0~r131-2ubuntu2
ubuntu/liblzma-dev 5.1.1alpha 20120614-2ubuntu2
ubuntu/liblzma5 5.1.1alpha 20120614-2ubuntu2
ubuntu/liblzo2-2 2.08-1.2
ubuntu/libm17n-0 1.7.0-3
ubuntu/libmagic1 1:5.25-2ubuntu1.3
ubuntu/libmagickcore-6.q16-2 8:6.8.9.9-7ubuntu5.15
ubuntu/libmagickwand-6.q16-2 8:6.8.9.9-7ubuntu5.15
ubuntu/libmirclient9 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmircommon7 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmircore1 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmirprotobuf3 0.26.3 16.04.20170605-0ubuntu1.1
ubuntu/libmount1 2.27.1-6ubuntu3.10
ubuntu/libmpc3 1.0.3-1
ubuntu/libmpfr4 3.1.4-1
ubuntu/libmpx0 5.4.0-6ubuntu1~16.04.12
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ubuntu/libnfsidmap2 0.25-5
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ubuntu/libnl-route-3-200 3.2.27-1ubuntu0.16.04.1
ubuntu/libnspr4 2:4.13.1-0ubuntu0.16.04.1
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ubuntu/libogg0 1.3.2-1
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ubuntu/liborc-0.4-0 1:0.4.25-1
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ubuntu/libpaper-utils 1.1.24 nmu4ubuntu1
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ubuntu/libpciaccess0 0.13.4-1
ubuntu/libpcre16-3 2:8.38-3.1
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ubuntu/libpcsclite1 1.8.14-1ubuntu1.16.04.1
ubuntu/libperl5.22 5.22.1-9ubuntu0.6
ubuntu/libpixman-1-0 0.33.6-1
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ubuntu/libpng12-0 1.2.54-1ubuntu1.1
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ubuntu/libpoppler-glib8 0.41.0-0ubuntu1.14
ubuntu/libpoppler58 0.41.0-0ubuntu1.14
ubuntu/libpopt0 1.16-10
ubuntu/libpotrace0 1.13-2
ubuntu/libprocps4 2:3.3.10-4ubuntu2.4
ubuntu/libprotobuf-lite9v5 2.6.1-1.3
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ubuntu/libpython-stdlib 2.7.12-1~16.04
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ubuntu/libpython2.7 2.7.12-1ubuntu0~16.04.9
ubuntu/libquadmath0 5.4.0-6ubuntu1~16.04.12
ubuntu/libreadline-dev 6.3-8ubuntu2
ubuntu/libreadline6-dev 6.3-8ubuntu2
ubuntu/libreadline6 6.3-8ubuntu2
ubuntu/libref-array1 0.5.0-1
ubuntu/librest-0.7-0 0.7.93-1
ubuntu/libroken18-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/librsvg2-2 2.40.13-3
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ubuntu/librtmp1 2.4 20151223.gitfa8646d-1ubuntu0.1
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ubuntu/libsasl2-modules-db 2.1.26.dfsg1-14ubuntu0.2
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ubuntu/libseccomp2 2.4.1-0ubuntu0.16.04.2
ubuntu/libsecret-1-0 0.18.4-1ubuntu2
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ubuntu/libsemanage-common 2.3-1build3
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ubuntu/libsm-dev 2:1.2.2-1
ubuntu/libsm6 2:1.2.2-1
ubuntu/libsmartcols1 2.27.1-6ubuntu3.10
ubuntu/libsmbclient 2:4.3.11 dfsg-0ubuntu0.16.04.25
ubuntu/libsndfile1 1.0.25-10ubuntu0.16.04.2
ubuntu/libsoup-gnome2.4-1 2.52.2-1ubuntu0.3
ubuntu/libsoup2.4-1 2.52.2-1ubuntu0.3
ubuntu/libspectre1 0.2.7-3ubuntu2
ubuntu/libsqlite3-0 3.11.0-1ubuntu1.4
ubuntu/libss2 1.42.13-1ubuntu1.2
ubuntu/libssl-dev 1.0.2g-1ubuntu4.15
ubuntu/libssl1.0.0 1.0.2g-1ubuntu4.15
ubuntu/libsss-idmap0 1.13.4-1ubuntu1.15
ubuntu/libsss-nss-idmap0 1.13.4-1ubuntu1.15
ubuntu/libsss-sudo 1.13.4-1ubuntu1.15
ubuntu/libstdc -5-dev 5.4.0-6ubuntu1~16.04.12
ubuntu/libstdc 6 5.4.0-6ubuntu1~16.04.12
ubuntu/libsynctex1 2015.20160222.37495-1ubuntu0.1
ubuntu/libsystemd0 229-4ubuntu21.27
ubuntu/libtalloc2 2.1.5-2
ubuntu/libtasn1-6 4.7-3ubuntu0.16.04.3
ubuntu/libtcl8.5 8.5.19-1
ubuntu/libtdb1 1.3.8-2
ubuntu/libtevent0 0.9.28-0ubuntu0.16.04.1
ubuntu/libtexlua52 2015.20160222.37495-1ubuntu0.1
ubuntu/libtexluajit2 2015.20160222.37495-1ubuntu0.1
ubuntu/libtext-unidecode-perl 1.27-1
ubuntu/libthai-data 0.1.24-2
ubuntu/libthai0 0.1.24-2
ubuntu/libtheora0 1.1.1 dfsg.1-8
ubuntu/libtiff5-dev 4.0.6-1ubuntu0.7
ubuntu/libtiff5 4.0.6-1ubuntu0.7
ubuntu/libtiffxx5 4.0.6-1ubuntu0.7
ubuntu/libtinfo-dev 6.0 20160213-1ubuntu1
ubuntu/libtinfo5 6.0 20160213-1ubuntu1
ubuntu/libtk8.5 8.5.19-1ubuntu1
ubuntu/libtsan0 5.4.0-6ubuntu1~16.04.12
ubuntu/libubsan0 5.4.0-6ubuntu1~16.04.12
ubuntu/libudev1 229-4ubuntu21.27
ubuntu/libusb-0.1-4 2:0.1.12-28
ubuntu/libustr-1.0-1 1.0.4-5
ubuntu/libuuid1 2.27.1-6ubuntu3.10
ubuntu/libuv1 1.8.0-1
ubuntu/libvisual-0.4-0 0.4.0-8
ubuntu/libvorbis0a 1.3.5-3ubuntu0.2
ubuntu/libvorbisenc2 1.3.5-3ubuntu0.2
ubuntu/libvpx3 1.5.0-2ubuntu1.1
ubuntu/libwayland-client0 1.12.0-1~ubuntu16.04.3
ubuntu/libwayland-cursor0 1.12.0-1~ubuntu16.04.3
ubuntu/libwayland-egl1-mesa 18.0.5-0ubuntu0~16.04.1
ubuntu/libwayland-server0 1.12.0-1~ubuntu16.04.3
ubuntu/libwbclient0 2:4.3.11 dfsg-0ubuntu0.16.04.25
ubuntu/libwind0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
ubuntu/libwrap0 7.6.q-25
ubuntu/libx11-6 2:1.6.3-1ubuntu2.1
ubuntu/libx11-data 2:1.6.3-1ubuntu2.1
ubuntu/libx11-dev 2:1.6.3-1ubuntu2.1
ubuntu/libx11-xcb1 2:1.6.3-1ubuntu2.1
ubuntu/libxau-dev 1:1.0.8-1
ubuntu/libxau6 1:1.0.8-1
ubuntu/libxaw7 2:1.0.13-1
ubuntu/libxcb-dri2-0 1.11.1-1ubuntu1
ubuntu/libxcb-dri3-0 1.11.1-1ubuntu1
ubuntu/libxcb-glx0 1.11.1-1ubuntu1
ubuntu/libxcb-present0 1.11.1-1ubuntu1
ubuntu/libxcb-render0-dev 1.11.1-1ubuntu1
ubuntu/libxcb-render0 1.11.1-1ubuntu1
ubuntu/libxcb-shm0-dev 1.11.1-1ubuntu1
ubuntu/libxcb-shm0 1.11.1-1ubuntu1
ubuntu/libxcb-sync1 1.11.1-1ubuntu1
ubuntu/libxcb-xfixes0 1.11.1-1ubuntu1
ubuntu/libxcb1-dev 1.11.1-1ubuntu1
ubuntu/libxcb1 1.11.1-1ubuntu1
ubuntu/libxcomposite1 1:0.4.4-1
ubuntu/libxcursor1 1:1.1.14-1ubuntu0.16.04.2
ubuntu/libxdamage1 1:1.1.4-2
ubuntu/libxdmcp-dev 1:1.1.2-1.1
ubuntu/libxdmcp6 1:1.1.2-1.1
ubuntu/libxext-dev 2:1.3.3-1
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ubuntu/libxfont1 1:1.5.1-1ubuntu0.16.04.4
ubuntu/libxft-dev 2.3.2-1
ubuntu/libxft2 2.3.2-1
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ubuntu/libxml-libxml-perl 2.0123 dfsg-1ubuntu0.1
ubuntu/libxml-namespacesupport-perl 1.11-1
ubuntu/libxml-sax-base-perl 1.07-1
ubuntu/libxml-sax-perl 0.99 dfsg-2ubuntu1
ubuntu/libxml2-dev 2.9.3 dfsg1-1ubuntu0.7
ubuntu/libxml2 2.9.3 dfsg1-1ubuntu0.7
ubuntu/libxmu6 2:1.1.2-2
ubuntu/libxmuu1 2:1.1.2-2
ubuntu/libxpm4 1:3.5.11-1ubuntu0.16.04.1
ubuntu/libxrandr2 2:1.5.0-1
ubuntu/libxrender-dev 1:0.9.9-0ubuntu1
ubuntu/libxrender1 1:0.9.9-0ubuntu1
ubuntu/libxshmfence1 1.2-1
ubuntu/libxss-dev 1:1.2.2-1
ubuntu/libxss1 1:1.2.2-1
ubuntu/libxt-dev 1:1.1.5-0ubuntu1
ubuntu/libxt6 1:1.1.5-0ubuntu1
ubuntu/libxtst6 2:1.2.2-1
ubuntu/libxxf86vm1 1:1.1.4-1
ubuntu/libzzip-0-13 0.13.62-3ubuntu0.16.04.2
ubuntu/linux-libc-dev 4.4.0-176.206
ubuntu/locales 2.23-0ubuntu11
ubuntu/login 1:4.2-3.1ubuntu5.4
ubuntu/lsb-base 9.20160110ubuntu0.2
ubuntu/m17n-db 1.7.0-2
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ubuntu/mawk 1.3.3-17ubuntu2
ubuntu/mime-support 3.59ubuntu1
ubuntu/mount 2.27.1-6ubuntu3.10
ubuntu/multiarch-support 2.23-0ubuntu11
ubuntu/ncurses-base 6.0 20160213-1ubuntu1
ubuntu/ncurses-bin 6.0 20160213-1ubuntu1
ubuntu/nodejs 4.2.6~dfsg-1ubuntu4.2
ubuntu/openjdk-8-jdk-headless 8u242-b08-0ubuntu3~16.04
ubuntu/openjdk-8-jdk 8u242-b08-0ubuntu3~16.04
ubuntu/openjdk-8-jre-headless 8u242-b08-0ubuntu3~16.04
ubuntu/openjdk-8-jre 8u242-b08-0ubuntu3~16.04
ubuntu/openssh-client 1:7.2p2-4ubuntu2.8
ubuntu/openssl 1.0.2g-1ubuntu4.15
ubuntu/passwd 1:4.2-3.1ubuntu5.4
ubuntu/patch 2.7.5-1ubuntu0.16.04.2
ubuntu/perl-base 5.22.1-9ubuntu0.6
ubuntu/perl-modules-5.22 5.22.1-9ubuntu0.6
ubuntu/perl 5.22.1-9ubuntu0.6
ubuntu/pkg-config 0.29.1-0ubuntu1
ubuntu/poppler-data 0.4.7-7
ubuntu/procps 2:3.3.10-4ubuntu2.4
ubuntu/python-minimal 2.7.12-1~16.04
ubuntu/python-sss 1.13.4-1ubuntu1.15
ubuntu/python-talloc 2.1.5-2
ubuntu/python2.7-minimal 2.7.12-1ubuntu0~16.04.9
ubuntu/python2.7 2.7.12-1ubuntu0~16.04.9
ubuntu/python 2.7.12-1~16.04
ubuntu/readline-common 6.3-8ubuntu2
ubuntu/rsync 3.1.1-3ubuntu1.3
ubuntu/samba-libs 2:4.3.11 dfsg-0ubuntu0.16.04.25
ubuntu/sed 4.2.2-7
ubuntu/sensible-utils 0.0.9ubuntu0.16.04.1
ubuntu/shared-mime-info 1.5-2ubuntu0.2
ubuntu/sssd-ad-common 1.13.4-1ubuntu1.15
ubuntu/sssd-ad 1.13.4-1ubuntu1.15
ubuntu/sssd-common 1.13.4-1ubuntu1.15
ubuntu/sssd-ipa 1.13.4-1ubuntu1.15
ubuntu/sssd-krb5-common 1.13.4-1ubuntu1.15
ubuntu/sssd-krb5 1.13.4-1ubuntu1.15
ubuntu/sssd-ldap 1.13.4-1ubuntu1.15
ubuntu/sssd-proxy 1.13.4-1ubuntu1.15
ubuntu/sssd 1.13.4-1ubuntu1.15
ubuntu/systemd-sysv 229-4ubuntu21.27
ubuntu/systemd 229-4ubuntu21.27
ubuntu/sysv-rc 2.88dsf-59.3ubuntu2
ubuntu/sysvinit-utils 2.88dsf-59.3ubuntu2
ubuntu/t1utils 1.39-2
ubuntu/tar 1.28-2.1ubuntu0.1
ubuntu/tcl8.5-dev 8.5.19-1
ubuntu/tcl8.5 8.5.19-1
ubuntu/tex-common 6.04ubuntu1
ubuntu/texinfo 6.1.0.dfsg.1-5
ubuntu/texlive-base 2015.20160320-1ubuntu0.1
ubuntu/texlive-binaries 2015.20160222.37495-1ubuntu0.1
ubuntu/texlive-extra-utils 2015.20160320-1
ubuntu/texlive-fonts-extra 2015.20160320-1
ubuntu/texlive-fonts-recommended 2015.20160320-1ubuntu0.1
ubuntu/texlive-latex-base 2015.20160320-1ubuntu0.1
ubuntu/texlive-latex-recommended 2015.20160320-1ubuntu0.1
ubuntu/tk8.5-dev 8.5.19-1ubuntu1
ubuntu/tk8.5 8.5.19-1ubuntu1
ubuntu/ttf-adf-accanthis 0.20090423-2
ubuntu/ttf-adf-gillius 0.20090423-2
ubuntu/ttf-adf-universalis 0.20090423-2
ubuntu/tzdata 2019c-0ubuntu0.16.04
ubuntu/ubuntu-keyring 2012.05.19
ubuntu/ubuntu-mono 14.04 16.04.20180326-0ubuntu1
ubuntu/ucf 3.0036
ubuntu/unzip 6.0-20ubuntu1
ubuntu/util-linux 2.27.1-6ubuntu3.10
ubuntu/wamerican 7.1-1
ubuntu/wget 1.17.1-1ubuntu1.5
ubuntu/x11-common 1:7.7 13ubuntu3.1
ubuntu/x11-xkb-utils 7.7 2
ubuntu/x11proto-core-dev 7.0.31-1~ubuntu16.04.2
ubuntu/x11proto-input-dev 2.3.1-1
ubuntu/x11proto-kb-dev 1.0.7-0ubuntu1
ubuntu/x11proto-render-dev 2:0.11.1-2
ubuntu/x11proto-scrnsaver-dev 1.2.2-1
ubuntu/x11proto-xext-dev 7.3.0-1
ubuntu/xauth 1:1.0.9-1ubuntu2
ubuntu/xdg-utils 1.1.1-1ubuntu1.16.04.3
ubuntu/xfonts-base 1:1.0.4 nmu1
ubuntu/xfonts-encodings 1:1.0.4-2
ubuntu/xfonts-utils 1:7.7 3ubuntu0.16.04.2
ubuntu/xkb-data 2.16-1ubuntu1
ubuntu/xorg-sgml-doctools 1:1.11-1
ubuntu/xserver-common 2:1.18.4-0ubuntu0.8
ubuntu/xtrans-dev 1.3.5-1
ubuntu/xvfb 2:1.18.4-0ubuntu0.8
ubuntu/xz-utils 5.1.1alpha 20120614-2ubuntu2
ubuntu/zip 3.0-11
ubuntu/zlib1g-dev 1:1.2.8.dfsg-2ubuntu4.3
ubuntu/zlib1g 1:1.2.8.dfsg-2ubuntu4.3

openssl 1.1.1
python 2.7.15
python 3.6.1

US_export_policy:US_export_policy *
additional:additional 1.0
api-common:api-common 1.1.0
barclay:barclay 2.0.0
biz.aQute.bnd:biz.aQute.bndlib 3.2.0
bsh:bsh 2.0b4
ch.qos.logback:logback-classic 1.0.1
ch.qos.logback:logback-core 1.0.1
charsets:charsets *
cldrdata:cldrdata *
com.amazonaws:aws-java-sdk-core 1.11.6
com.amazonaws:aws-java-sdk-kms 1.11.6
com.amazonaws:aws-java-sdk-s3 1.11.6
com.beust:jcommander 1.12
com.esotericsoftware.kryo:kryo 2.20
com.esotericsoftware.minlog:minlog 1.2
com.esotericsoftware.reflectasm:reflectasm 1.07
com.fasterxml.jackson.core:jackson-annotations 2.6.6
com.fasterxml.jackson.core:jackson-core 2.1.3
com.fasterxml.jackson.core:jackson-core 2.6.6
com.fasterxml.jackson.core:jackson-databind 2.6.6
com.github.arara:arara 3.0
com.github.zafarkhaja:java-semver 0.9.0
com.google.api-client:google-api-client 1.21.0
com.google.apis:google-api-services-storage v1-rev108-1.22.0
com.google.auth:google-auth-library-credentials 0.7.0
com.google.auth:google-auth-library-oauth2-http 0.7.0
com.google.auto.service:auto-service 1.0-rc2
com.google.auto.value:auto-value 1.2
com.google.auto:auto-common 1.0-SNAPSHOT
com.google.cloud:google-cloud-core-http 1.2.3
com.google.cloud:google-cloud-core 1.2.3
com.google.cloud:google-cloud-storage 1.2.3
com.google.code.gson:gson 2.7
com.google.gson:gson 2.2.2
com.google.guava:guava-jdk5 17.0
com.google.guava:guava 15.0
com.google.guava:guava 19.0
com.google.guava:guava 20.0
com.google.http-client:google-http-client-appengine 1.21.0
com.google.http-client:google-http-client-jackson2 1.21.0
com.google.http-client:google-http-client-jackson 1.21.0
com.google.http-client:google-http-client 1.21.0
com.google.oauth-client:google-oauth-client 1.21.0
com.google.protobuf:protobuf-java-util 3.3.0
com.google.protobuf:protobuf-java 3.3.0
com.googlecode.jatl:jatl 0.2.2
com.googlecode.javaewah:JavaEWAH 0.7.9
com.jcraft:jsch.agentproxy.core 0.0.9
com.jcraft:jsch.agentproxy.jsch 0.0.9
com.jcraft:jsch.agentproxy.pageant 0.0.9
com.jcraft:jsch.agentproxy.sshagent 0.0.9
com.jcraft:jsch.agentproxy.usocket-jna 0.0.9
com.jcraft:jsch.agentproxy.usocket-nc 0.0.9
com.jcraft:jsch 0.1.53
com.sun.jna.platform:jna-platform 4.1.0
com.sun.jna:jna 4.1.0
com.sun:jce 1.8.0_242
com.sun:sunec 1.8.0_242
com.sun:sunjce_provider 1.8.0_242
com.sun:sunpkcs11 1.8.0_242
commons-beanutils:commons-beanutils 1.8.0
commons-cli:commons-cli 1.2
commons-codec:commons-codec 1.3
commons-codec:commons-codec 1.6
commons-collections:commons-collections 3.2.1
commons-collections:commons-collections 3.2.2
commons-io:commons-io 2.2
commons-io:commons-io 2.4
commons-lang:commons-lang 2.4
commons-lang:commons-lang 2.6
commons-logging:commons-logging 1.1.1
commons-logging:commons-logging 1.1.3
compile-transitive:compile-transitive 1.0
compile:compile 1.0
coveralls-gradle-plugin:coveralls-gradle-plugin 2.6.3
dnsns:dnsns *
dt:dt *
gatk-native-bindings:gatk-native-bindings 0.1.0-rc-1
gax:gax 1.4.2
gkl:gkl 0.8.5
google-api-services-storage-v1-rev108:google-api-services-storage-v1-rev108 1.22.0
gradle-announce:gradle-announce 3.1
gradle-antlr:gradle-antlr 3.1
gradle-base-services-groovy:gradle-base-services-groovy 3.1
gradle-base-services:gradle-base-services 3.1
gradle-build-comparison:gradle-build-comparison 3.1
gradle-build-init:gradle-build-init 3.1
gradle-cli:gradle-cli 3.1
gradle-code-quality:gradle-code-quality 3.1
gradle-composite-builds:gradle-composite-builds 3.1
gradle-core:gradle-core 3.1
gradle-dependency-management:gradle-dependency-management 3.1
gradle-diagnostics:gradle-diagnostics 3.1
gradle-docs:gradle-docs 3.1
gradle-ear:gradle-ear 3.1
gradle-git-version:gradle-git-version 0.5.1
gradle-git:gradle-git 1.4.2
gradle-ide-native:gradle-ide-native 3.1
gradle-ide-play:gradle-ide-play 3.1
gradle-ide:gradle-ide 3.1
gradle-installation-beacon:gradle-installation-beacon 3.1
gradle-ivy:gradle-ivy 3.1
gradle-jacoco:gradle-jacoco 3.1
gradle-javascript:gradle-javascript 3.1
gradle-jetty:gradle-jetty 3.1
gradle-jvm-services:gradle-jvm-services 3.1
gradle-language-groovy:gradle-language-groovy 3.1
gradle-language-java:gradle-language-java 3.1
gradle-language-jvm:gradle-language-jvm 3.1
gradle-language-native:gradle-language-native 3.1
gradle-language-scala:gradle-language-scala 3.1
gradle-logging:gradle-logging 3.1
gradle-maven:gradle-maven 3.1
gradle-messaging:gradle-messaging 3.1
gradle-model-core:gradle-model-core 3.1
gradle-model-groovy:gradle-model-groovy 3.1
gradle-native:gradle-native 3.1
gradle-open-api:gradle-open-api 3.1
gradle-osgi:gradle-osgi 3.1
gradle-platform-base:gradle-platform-base 3.1
gradle-platform-jvm:gradle-platform-jvm 3.1
gradle-platform-native:gradle-platform-native 3.1
gradle-platform-play:gradle-platform-play 3.1
gradle-plugin-development:gradle-plugin-development 3.1
gradle-plugin-use:gradle-plugin-use 3.1
gradle-plugins:gradle-plugins 3.1
gradle-process-services:gradle-process-services 3.1
gradle-publish:gradle-publish 3.1
gradle-reporting:gradle-reporting 3.1
gradle-resources-http:gradle-resources-http 3.1
gradle-resources-s3:gradle-resources-s3 3.1
gradle-resources-sftp:gradle-resources-sftp 3.1
gradle-resources:gradle-resources 3.1
gradle-scala:gradle-scala 3.1
gradle-script-kotlin:gradle-script-kotlin 0.3.2
gradle-signing:gradle-signing 3.1
gradle-task-cache-http:gradle-task-cache-http 3.1
gradle-test-kit:gradle-test-kit 3.1
gradle-testing-base:gradle-testing-base 3.1
gradle-testing-jvm:gradle-testing-jvm 3.1
gradle-testing-native:gradle-testing-native 3.1
gradle-tooling-api-builders:gradle-tooling-api-builders 3.1
gradle-tooling-api:gradle-tooling-api 3.1
gradle-ui:gradle-ui 3.1
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gradle-wrapper:gradle-wrapper 3.1
grgit:grgit 1.5.0
hamcrest-core:hamcrest-core 1.3
htsjdk:htsjdk 2.16.0
icedtea-sound:icedtea-sound *
jaccess:jaccess *
jackson-core-asl:jackson-core-asl 1.9.11
jcifs:jcifs 1.3.17
jcip-annotations:jcip-annotations 1.0
jconsole:jconsole *
jdtCompilerAdapter:jdtCompilerAdapter *
joda-time:joda-time 2.8.2
joda-time:joda-time 2.9.2
json-lib:json-lib 2.3-jdk15
jsr305:jsr305 3.0.0
jsse:jsse 1.8.0_242
junit:junit 4.12
kotlin-reflect:kotlin-reflect 1.1.0-dev-2053
local_policy:local_policy *
localedata:localedata *
management-agent:management-agent *
nashorn:nashorn 1.8.0_242-8u242-b08-0ubuntu3~16.04-b08
native-platform-freebsd-amd64:native-platform-freebsd-amd64 0.11
native-platform-freebsd-i386:native-platform-freebsd-i386 0.11
native-platform-linux-amd64:native-platform-linux-amd64 0.11
native-platform-linux-i386:native-platform-linux-i386 0.11
native-platform-osx-amd64:native-platform-osx-amd64 0.11
native-platform-osx-i386:native-platform-osx-i386 0.11
native-platform-windows-amd64:native-platform-windows-amd64 0.11
native-platform-windows-i386:native-platform-windows-i386 0.11
native-platform:native-platform 0.11
nekohtml:nekohtml 1.9.14
nekohtml:nekohtml 1.9.16
net.sf.ezmorph:ezmorph 1.0.6
net.sf.jopt-simple:jopt-simple 5.0.3
ngs-java:ngs-java 2.9.0
org.apache.ant:ant-launcher 1.9.4
org.apache.ant:ant-launcher 1.9.6
org.apache.ant:ant 1.9.4
org.apache.ant:ant 1.9.6
org.apache.commons:commons-compress 1.4.1
org.apache.commons:commons-exec 1.1
org.apache.commons:commons-jexl 2.1.1
org.apache.commons:commons-lang3 3.1
org.apache.commons:commons-lang3 3.4
org.apache.commons:commons-math3 3.5
org.apache.geronimo.specs:geronimo-annotation_1.0_spec 1.0
org.apache.httpcomponents:httpclient 4.0.1
org.apache.httpcomponents:httpclient 4.3.6
org.apache.httpcomponents:httpclient 4.4.1
org.apache.httpcomponents:httpcore 4.0.1
org.apache.httpcomponents:httpcore 4.3.3
org.apache.httpcomponents:httpcore 4.4.4
org.apache.httpcomponents:httpmime 4.3
org.apache.logging.log4j:log4j-api 2.5
org.apache.logging.log4j:log4j-core 2.5
org.apache.maven.wagon:wagon-file 2.4
org.apache.maven.wagon:wagon-http-shared4 2.4
org.apache.maven.wagon:wagon-http 2.4
org.apache.maven.wagon:wagon-provider-api 2.4
org.apache.maven:maven-aether-provider 3.0.4
org.apache.maven:maven-artifact 3.0.4
org.apache.maven:maven-compat 3.0.4
org.apache.maven:maven-core 3.0.4
org.apache.maven:maven-model-builder 3.0.4
org.apache.maven:maven-model 3.0.4
org.apache.maven:maven-plugin-api 3.0.4
org.apache.maven:maven-repository-metadata 3.0.4
org.apache.maven:maven-settings-builder 3.0.4
org.apache.maven:maven-settings 3.0.4
org.apache.tools.ant.Main:ant-bootstrap *
org.apache.xbean:xbean-reflect 3.4
org.apache.xerces.impl.Version:xercesImpl 2.9.1
org.apache.xml.resolver.Catalog:xml-resolver 1.2
org.apache.xmlcommons.Version:xml-apis 1.3.04
org.apache:ivy 2.2.0
org.bouncycastle:bcpg-jdk15on 1.51
org.bouncycastle:bcprov-jdk15on 1.51
org.broadinstitute:google-cloud-nio-GATK4-custom-patch 0.20.4-alpha-GCS-RETRY-FIX
org.codehaus.groovy.modules.http-builder:http-builder 0.7.1
org.codehaus.groovy:groovy-all 2.4.7
org.codehaus.groovy:groovy-backports-compat23 2.4.4
org.codehaus.plexus:plexus-classworlds 2.4
org.codehaus.plexus:plexus-component-annotations 1.5.5
org.codehaus.plexus:plexus-container-default 1.5.5
org.codehaus.plexus:plexus-interpolation 1.14
org.codehaus.plexus:plexus-utils 2.0.6
org.debian.security.UpdateCertificates:ca-certificates-java *
org.dom4j:dom4j 1.6.1
org.eclipse.jdt.core:core 3.1.1
org.eclipse.jdt:org.eclipse.jdt.annotation 1.1.0
org.eclipse.jgit:org.eclipse.jgit.ui 4.1.1.201511131810-r
org.eclipse.jgit:org.eclipse.jgit 4.1.1.201511131810-r
org.freemarker.freemarker:freemarker 2.3.23
org.fusesource.hawtjni:hawtjni-runtime 1.9
org.fusesource.jansi:jansi-linux32 1.6
org.fusesource.jansi:jansi-linux64 1.6
org.fusesource.jansi:jansi-native 1.6
org.fusesource.jansi:jansi-osx 1.6
org.fusesource.jansi:jansi-windows32 1.6
org.fusesource.jansi:jansi-windows64 1.6
org.fusesource.jansi:jansi 1.13
org.gradle.launcher.GradleMain:gradle-launcher 3.1
org.jaxen:jaxen 1.1
org.jdom2:jdom2 2.0.5
org.jetbrains.kotlin:kotlin-compiler-embeddable 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-runtime 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-stdlib 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-test-junit 1.1.0-dev-2053
org.jetbrains.kotlin:kotlin-test 1.1.0-dev-2053
org.json:json 20160810
org.mortbay.jetty:jetty-annotations 6.1.25
org.mortbay.jetty:jetty-naming 6.1.25
org.mortbay.jetty:jetty-plus 6.1.25
org.mortbay.jetty:jetty-util 6.1.25
org.mortbay.jetty:jetty 6.1.25
org.mortbay.jetty:jsp-2.1 6.1.14
org.mortbay.jetty:jsp-api-2.1 6.1.14
org.mortbay.jetty:servlet-api 2.5-20081211
org.mozilla.javascript.tools.shell.Main:rhino 1.7R3
org.mvel:mvel2 2.0.19
org.objectweb.asm.all:asm-all 5.1
org.objectweb.asm.commons:asm-commons 5.0.3
org.objectweb.asm.tree:asm-tree 5.0.3
org.objectweb.asm:asm 5.0.3
org.objenesis:objenesis 1.2
org.simpleframework:simple 4.1.21
org.slf4j:jcl-over-slf4j 1.7.10
org.slf4j:jul-to-slf4j 1.7.10
org.slf4j:log4j-over-slf4j 1.7.10
org.slf4j:slf4j-api 1.6.4
org.slf4j:slf4j-api 1.7.10
org.slf4j:slf4j-api 1.7.12
org.sonatype.aether:aether-api 1.13.1
org.sonatype.aether:aether-connector-wagon 1.13.1
org.sonatype.aether:aether-impl 1.13.1
org.sonatype.aether:aether-spi 1.13.1
org.sonatype.aether:aether-util 1.13.1
org.sonatype.plexus:plexus-cipher 1.7
org.sonatype.plexus:plexus-sec-dispatcher 1.3
org.sonatype.pmaven:pmaven-common 0.8-SNAPSHOT
org.sonatype.pmaven:pmaven-groovy 0.8-SNAPSHOT
org.testng:testng 6.3.1
org.threeten:threetenbp 1.3.3
org.tukaani.xz:xz 1.5
org.xerial.snappy.SnappyBundleActivator:snappy-java 1.1.4
org.yaml:snakeyaml 1.11
org.yaml:snakeyaml 1.6
otherLib:otherLib 1.0
picard:picard 2.18.9-SNAPSHOT
picard:picard 2.18.9-SNAPSHOT-all
project1:project1 1.0
project2:project2 1.0
project3:project3 1.0
proto-google-common-protos:proto-google-common-protos 0.1.13
proto-google-iam-v1:proto-google-iam-v1 0.1.13
providedCompile-transitive:providedCompile-transitive 1.0
providedCompile:providedCompile 1.0
providedRuntime:providedRuntime 1.0
resources:resources 1.8.0_242
rt:rt 1.8.0_242
runtime:runtime 1.0
sa-jdi:sa-jdi *
sample-plugins:sample-plugins 1.0.0
shadow:shadow 1.2.3
tools:tools *
zipfs:zipfs 1.8.0_242

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