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apoorvababu/scviewerlite : latest

Light version of SeuratViewer, an R Shiny website for viewing single cell RNA-Seq data

Latest release: almost 2 years ago - 9 downloads - 1,554 dependencies

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.56.2
BH 1.75.0-0
Biobase 2.54.0
BiocFileCache 2.2.0
BiocGenerics 0.40.0
BiocManager 1.30.16
BiocVersion 3.14.0
Biostrings 2.62.0
DBI 1.1.1
DEoptimR 1.0-9
DT 0.20
DelayedArray 0.18.0
FNN 1.1.3
GenomeInfoDb 1.30.0
GenomeInfoDbData 1.2.7
GenomicRanges 1.44.0
IRanges 2.28.0
KEGGREST 1.34.0
KernSmooth 2.23-17
MASS 7.3-51.6
Matrix 1.2-18
Matrix 1.3-4
MatrixGenerics 1.4.3
MatrixModels 0.5-0
ModelMetrics 1.2.2.2
NMF 0.23.0
R6 2.5.1
RANN 2.6.1
RColorBrewer 1.1-2
RCurl 1.98-1.5
ROCR 1.0-11
RSQLite 2.2.8
RSpectra 0.16-0
Rcpp 1.0.7
RcppAnnoy 0.0.19
RcppArmadillo 0.10.7.3.0
RcppEigen 0.3.3.9.1
RcppHNSW 0.3.0
RcppParallel 5.1.4
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
Rtsne 0.15
S4Vectors 0.32.2
SQUAREM 2021.1
Seurat 4.0.5
SeuratObject 4.0.3
SingleCellExperiment 1.14.1
SparseM 1.81
SummarizedExperiment 1.22.0
TTR 0.24.2
VIM 6.1.1
XML 3.99-0.8
XVector 0.34.0
abind 1.4-5
askpass 1.1
assertthat 0.2.1
backports 1.3.0
base64enc 0.1-3
base 4.1.1
biomaRt 2.50.0
bit64 4.0.5
bit 4.0.4
bitops 1.0-7
blob 1.2.2
boot 1.3-25
brew 1.0-6
brio 1.1.2
broom 0.7.10
bslib 0.3.1
caTools 1.18.2
cachem 1.0.6
callr 3.7.0
car 3.0-12
carData 3.0-4
caret 6.0-90
class 7.3-17
cli 3.1.0
clipr 0.7.1
cluster 2.1.0
codetools 0.2-16
colorspace 2.0-2
commonmark 1.7
compiler 4.1.1
conquer 1.2.1
cowplot 1.1.1
cpp11 0.4.1
crayon 1.4.2
credentials 1.3.1
crosstalk 1.2.0
curl 4.3.2
data.table 1.14.2
datasets 4.1.1
dbplyr 2.1.1
deldir 1.0-6
desc 1.4.0
destiny 3.9.0
devtools 2.4.2
diffobj 0.3.5
digest 0.6.28
doParallel 1.0.16
docopt 0.6.1
dplyr 1.0.7
dqrng 0.3.0
e1071 1.7-9
ellipsis 0.3.2
evaluate 0.14
fansi 0.5.0
farver 2.1.0
fastmap 1.1.0
filelock 1.0.2
fitdistrplus 1.1-6
fontawesome 0.2.2
foreach 1.5.1
foreign 0.8-79
fs 1.5.0
future.apply 1.8.1
future 1.23.0
gam 1.20
generics 0.1.1
gert 1.4.3
ggplot.multistats 1.0.0
ggplot2 3.3.5
ggrepel 0.9.1
ggridges 0.5.3
ggthemes 4.2.4
gh 1.3.0
gitcreds 0.1.1
globals 0.14.0
glue 1.5.0
goftest 1.2-3
gower 0.2.2
gplots 3.1.1
grDevices 4.1.1
graphics 4.1.1
grid 4.1.1
gridBase 0.4-7
gridExtra 2.3
gtable 0.3.0
gtools 3.9.2
here 1.0.1
hexbin 1.28.2
highr 0.9
hms 1.1.1
htmltools 0.5.2
htmlwidgets 1.5.4
httpuv 1.6.3
httr 1.4.2
ica 1.0-2
igraph 1.2.8
ini 0.3.1
ipred 0.9-12
irlba 2.3.3
isoband 0.2.5
iterators 1.0.13
jquerylib 0.1.4
jsonlite 1.7.2
knitr 1.36
knn.covertree 1.0
labeling 0.4.2
laeken 0.5.2
later 1.3.0
lattice 0.20-41
lava 1.6.10
lazyeval 0.2.2
leiden 0.3.9
lifecycle 1.0.1
linkXTS 1.0
listenv 0.8.0
littler 0.3.9
lme4 1.1-27.1
lmtest 0.9-39
lubridate 1.8.0
magrittr 2.0.1
maptools 1.1-2
matrixStats 0.61.0
memoise 2.0.0
methods 4.1.1
mgcv 1.8-31
mime 0.12
miniUI 0.1.1.1
minqa 1.2.4
munsell 0.5.0
nlme 3.1-147
nloptr 1.2.2.3
nnet 7.3-14
numDeriv 2016.8-1.1
openssl 1.4.5
org.testing.db 0.1
pROC 1.18.0
parallel 4.1.1
parallelDist 0.2.4
parallelly 1.28.1
patchwork 1.1.1
pbapply 1.5-0
pbkrtest 0.5.1
pcaMethods 1.84.0
pillar 1.6.4
pkgKitten 0.2.2
pkgbuild 1.2.0
pkgconfig 2.0.3
pkgload 1.2.3
pkgmaker 0.32.2
plogr 0.2.0
plotly 4.10.0
plyr 1.8.6
png 0.1-7
polyclip 1.10-0
praise 1.0.0
prettyunits 1.1.1
processx 3.5.2
prodlim 2019.11.13
progress 1.2.2
progressr 0.9.0
promises 1.2.0.1
proxy 0.4-26
ps 1.6.0
purrr 0.3.4
quantreg 5.86
ranger 0.13.1
rappdirs 0.3.3
rcmdcheck 1.4.0
recipes 0.1.17
registry 0.5-1
rematch2 2.1.2
remotes 2.4.1
reshape2 1.4.4
reticulate 1.22
rgl 0.107.14
rglwidget 0.2.1
rlang 0.4.12
rngtools 1.5.2
robustbase 0.93-9
roxygen2 7.1.2
rpart 4.1-15
rprojroot 2.0.2
rstudioapi 0.13
rversions 2.1.1
sass 0.4.0
scales 1.1.1
scattermore 0.7
scatterplot3d 0.3-41
sctransform 0.3.2
sessioninfo 1.2.1
shiny 1.7.1
shinyBS 0.61
shinyRGL 0.1.0
shinydashboard 0.7.2
shinyjs 2.0.0
shinythemes 1.2.0
sitmo 2.0.2
smoother 1.1
sourcetools 0.1.7
sp 1.4-6
spatial 7.3-12
spatstat.core 2.3-1
spatstat.data 2.1-0
spatstat.geom 2.3-0
spatstat.sparse 2.0-0
spatstat.utils 2.2-0
splines 4.1.1
stats4 4.1.1
stats 4.1.1
stringi 1.7.5
stringr 1.4.0
survival 3.1-12
sys 3.4
tcltk 4.1.1
tensor 1.5
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.0
tibble 3.1.6
tidyr 1.1.4
tidyselect 1.1.1
timeDate 3043.102
tools 4.1.1
translations 4.1.1
usethis 2.1.3
utf8 1.2.2
utils 4.1.1
uwot 0.1.10
vcd 1.4-9
vctrs 0.3.8
viridisLite 0.4.0
waldo 0.3.1
whisker 0.4
withr 2.4.2
xfun 0.28
xml2 1.3.2
xopen 1.0.0
xtable 1.8-4
xts 0.12.1
yaml 2.2.1
zip 2.2.0
zlibbioc 1.40.0
zoo 1.8-9