repbioinfo/detectseq : latest

Latest release: almost 3 years ago - 66 downloads - 2,183 dependencies

Dependencies

BH 1.74.0-1
CVST 0.2-2
DBI 1.1.2
DBI 1.1.3
DBItest 1.7.2
DEoptimR 1.0-10
DRR 0.0.4
DT 0.17
FNN 1.1.3
Formula 1.2-4
Hmisc 4.6-0
KernSmooth 2.23-20
MASS 7.3-55
MLmetrics 1.1.1
Matrix 1.4-0
MatrixModels 0.5-0
ModelMetrics 1.2.2.2
R6 2.5.1
RANN 2.6.1
RColorBrewer 1.1-2
RColorBrewer 1.1-3
RMySQL 0.10.23
ROCR 1.0-11
RPostgreSQL 0.7-3
RSQLite 2.2.9
RSpectra 0.16-0
RUnit 0.4.32
Rcpp 1.0.8
RcppArmadillo 0.10.8.1.0
RcppEigen 0.3.3.9.1
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppRoll 0.3.0
SQUAREM 2021.1
SparseM 1.81
TH.data 1.1-0
TTR 0.24.3
TeachingDemos 2.12
XML 3.99-0.9
abind 1.4-5
acepack 1.4.1
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.1.2
bench 1.1.2
bit64 4.0.5
bit 4.0.4
bit 4.0.5
bitops 1.0-7
blob 1.2.2
blob 1.2.4
boot 1.3-28
brio 1.1.3
broom 0.7.12
broom 1.0.4
bslib 0.4.2
caTools 1.18.2
cachem 1.0.6
cachem 1.0.7
callr 3.7.0
callr 3.7.3
caret 6.0-90
cba 0.2-21
cellranger 1.1.0
checkmate 2.0.0
chron 2.3-56
class 7.3-20
classInt 0.4-3
cli 3.2.0
cli 3.6.0
cliapp 0.1.1
clipr 0.8.0
cluster 2.1.2
codetools 0.2-18
colorspace 2.0-2
colorspace 2.1-0
commonmark 1.7
compiler 4.1.2
conflicted 1.2.0
conquer 1.2.2
covr 3.5.1
cpp11 0.4.2
cpp11 0.4.3
crayon 1.5.0
crayon 1.5.2
crosstalk 1.2.0
curl 4.3.2
curl 5.0.0
data.table 1.14.2
data.table 1.14.8
datasets 4.1.2
dbplyr 2.1.1
dbplyr 2.3.1
ddalpha 1.3.11
decor 1.0.1
deldir 1.0-6
desc 1.4.0
diffobj 0.3.5
digest 0.6.29
digest 0.6.31
dimRed 0.2.4
doMC 1.3.8
dplyr 1.0.8
dplyr 1.1.0
dtplyr 1.3.0
dygraphs 1.1.1.6
e1071 1.7-9
earth 5.3.1
ellipsis 0.3.2
evaluate 0.15
evaluate 0.20
fansi 1.0.2
fansi 1.0.4
farver 2.1.0
farver 2.1.1
fastICA 1.2-3
fastmap 1.1.0
fastmap 1.1.1
fastmatch 1.1-3
filehash 2.4-2
fontBitstreamVera 0.1.1
fontLiberation 0.1.0
fontquiver 0.2.1
forcats 1.0.0
foreach 1.5.2
foreign 0.8-82
fs 1.5.2
fs 1.6.1
fts 0.9.9.2
furrr 0.2.3
future.apply 1.8.1
future 1.24.0
gargle 1.3.0
gdata 2.18.0
generics 0.1.2
generics 0.1.3
geometry 0.4.5
geosphere 1.5-14
ggplot2 3.3.5
ggplot2 3.4.1
gh 1.3.0
gitcreds 0.1.1
globals 0.14.0
glue 1.6.1
glue 1.6.2
goftest 1.2-3
googledrive 2.0.0
googlesheets4 1.0.1
gower 1.0.0
gplots 3.1.1
grDevices 4.1.2
graphics 4.1.2
grid 4.1.2
gridExtra 2.3
gtable 0.3.0
gtable 0.3.3
gtools 3.9.2
haven 2.5.2
hexbin 1.28.2
highr 0.10
highr 0.9
hms 1.1.1
hms 1.1.2
htmlTable 2.4.0
testit 0.13
htmltools 0.5.2
htmltools 0.5.4
htmlwidgets 1.5.4
httpuv 1.6.5
httr 1.4.2
httr 1.4.5
ids 1.0.1
igraph 1.2.11
ini 0.3.1
interp 1.0-33
ipred 0.9-12
isoband 0.2.5
isoband 0.2.7
iterators 1.0.14
jpeg 0.1-9
jquerylib 0.1.4
jsonlite 1.7.3
jsonlite 1.8.4
kernlab 0.9-29
knitr 1.37
knitr 1.42
ks 1.13.3
labeling 0.4.2
later 1.3.0
lattice 0.20-45
latticeExtra 0.6-29
lava 1.6.10
lazyeval 0.2.2
lifecycle 1.0.1
lifecycle 1.0.3
linkXTS 1.0
linprog 0.9-2
listenv 0.8.0
littler 0.3.15
lme4 1.1-28
lobstr 1.1.1
logcondens 2.1.6
lpSolve 5.6.15
lubridate 1.8.0
lubridate 1.9.2
lwgeom 0.2-8
magic 1.6-0
magrittr 2.0.2
magrittr 2.0.3
mapproj 1.2.8
maps 3.4.0
maptools 1.1-2
markdown 1.1
matrixStats 0.61.0
mclust 5.4.9
mda 0.5-2
memoise 2.0.1
methods 4.1.2
mets 1.2.9
mgcv 1.8-39
mime 0.12
minqa 1.2.4
misc3d 0.9-1
mlbench 2.1-3
mockery 0.4.3
mockr 0.1
modeldata 0.1.1
modelr 0.1.10
multcomp 1.4-18
multicool 0.1-12
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-155
nloptr 2.0.0
nnet 7.3-17
numDeriv 2016.8-1.1
openssl 1.4.6
openssl 2.0.6
pROC 1.18.0
palmerpenguins 0.1.0
parallel 4.1.2
parallelly 1.30.0
pillar 1.7.0
pillar 1.8.1
pkgKitten 0.2.2
pkgbuild 1.3.1
pkgconfig 2.0.3
pkgload 1.2.4
plogr 0.2.0
plot3D 1.4
plotmo 3.6.1
plotrix 3.8-2
pls 2.8-0
plyr 1.8.6
png 0.1-7
polyclip 1.10-0
pracma 2.3.6
praise 1.0.0
prettycode 1.1.0
prettyunits 1.1.1
processx 3.5.2
processx 3.8.0
prodlim 2019.11.13
profmem 0.6.0
progress 1.2.2
progressr 0.10.0
promises 1.2.0.1
proxy 0.4-26
ps 1.6.0
ps 1.7.3
purrr 0.3.4
purrr 1.0.1
quadprog 1.5-8
quantmod 0.4.18
quantreg 5.88
ragg 1.2.1
ragg 1.2.5
rappdirs 0.3.3
raster 3.5-15
readr 2.1.4
readxl 1.4.2
recipes 0.1.17
rematch2 2.1.2
rematch 1.0.1
reprex 2.0.2
reshape2 1.4.4
rex 1.2.1
rgdal 1.5-28
rgl 0.108.3
rlang 1.0.1
rlang 1.1.0
rmarkdown 2.20
rmarkdown 2.6
robustbase 0.93-9
rpart 4.1.16
rprojroot 2.0.2
rsample 0.1.1
rstudioapi 0.13
rstudioapi 0.14
rvest 1.0.3
s2 1.0.7
sandwich 3.0-1
sass 0.4.0
sass 0.4.5
scales 1.1.1
scales 1.2.1
selectr 0.4-2
setRNG 2013.9-1
sf 1.0-6
sfsmisc 1.1-12
shiny 1.5.0
slider 0.2.2
sodium 1.2.0
sourcetools 0.1.7
sp 1.4-6
spatial 7.3-15
spatstat.core 2.3-2
spatstat.data 2.1-2
spatstat.geom 2.3-2
spatstat.linnet 2.3-1
spatstat.sparse 2.1-0
spatstat.utils 2.3-0
spatstat 2.3-0
splines 4.1.2
statmod 1.4.36
stats4 4.1.2
stats 4.1.2
stringi 1.7.12
stringi 1.7.6
stringr 1.4.0
stringr 1.5.0
survival 3.2-13
svglite 2.1.0
sys 3.4
sys 3.4.1
systemfonts 1.0.4
tcltk 4.1.2
tensor 1.5
terra 1.5-21
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.2
textshaping 0.3.6
tibble 3.1.6
tibble 3.2.1
tidyr 1.2.0
tidyr 1.3.0
tidyselect 1.1.2
tidyselect 1.2.0
tidyverse 2.0.0
tikzDevice 0.12.3.1
timeDate 3043.102
timeSeries 3062.100
timechange 0.2.0
timereg 2.0.1
tinytex 0.37
tinytex 0.44
tools 4.1.2
translations 4.1.2
tseries 0.10-49
tzdb 0.3.0
units 0.8-0
utf8 1.2.2
utf8 1.2.3
utils 4.1.2
uuid 1.1-0
vctrs 0.3.8
vctrs 0.6.0
vdiffr 1.0.2
viridis 0.6.2
viridisLite 0.4.0
viridisLite 0.4.1
vroom 1.6.1
waldo 0.3.1
warp 0.2.0
webutils 1.1
withr 2.4.3
withr 2.5.0
wk 0.6.0
wkutils 0.1.1
xfun 0.29
xfun 0.37
xml2 1.3.3
xtable 1.8-4
xts 0.12.1
yaml 2.3.5
yaml 2.3.7
zoo 1.8-9

bash 5.1.16
java 11.0.13 7-b1751.21
python 3.10.6
python 3.9.12
python 3.9.13

dnaio 0.7.1
Automat 0.8.0
Automat 20.2.0
Babel 2.9.1
Bottleneck 1.3.5
ConfigArgParse 1.4
Cython 0.29.32
Django 3.1.14
Flask 1.1.2
GitPython 3.1.18
HeapDict 1.0.1
Jinja2 2.11.3
Jinja2 3.0.3
Markdown 3.1.1
Markdown 3.3.4
MarkupSafe 1.1.1
MarkupSafe 2.0.1
MarkupSafe 2.1.1
Pillow 9.0.1
Pillow 9.2.0
Pillow 9.4.0
Protego 0.1.16
PuLP 2.6.0
PyDispatcher 2.0.5
PyGObject 3.42.1
PyHamcrest 1.9.0
PyHamcrest 2.0.2
PyJWT 2.4.0
PyNaCl 1.4.0
PyQt5-sip 12.11.0
PySocks 1.7.1
PyWavelets 1.3.0
PyYAML 5.4
PyYAML 5.4.1
PyYAML 6.0
Pygments 2.11.2
QDarkStyle 3.0.2
QtAwesome 1.0.3
QtPy 2.2.0
Rtree 0.9.7
SQLAlchemy 1.4.39
Scrapy 2.6.2
SecretStorage 3.3.1
Send2Trash 1.8.0
Sphinx 5.0.2
TBB 0.2
Twisted 22.2.0
Twisted 22.4.0
Unidecode 1.2.0
Werkzeug 2.0.3
XlsxWriter 3.0.3
aioeasywebdav 2.4.0
aiohttp 3.8.1
aiosignal 1.2.0
alabaster 0.7.12
amply 0.1.5
anaconda-client 1.11.0
anaconda-navigator 2.3.1
anaconda-project 0.11.1
anyio 3.5.0
apipkg 2.0.0
appdirs 1.4.4
argon2-cffi-bindings 21.2.0
argon2-cffi 21.3.0
arrow 1.2.2
asgiref 3.2.10
astroid 2.11.7
astropy 5.1
asttokens 2.0.5
async-timeout 4.0.1
asynctest 0.13.0
atomicwrites 1.4.0
attmap 0.13.2
attrs 19.3.0
attrs 21.4.0
autobahn 20.12.3
autopep8 1.6.0
backcall 0.2.0
backports.functools-lru-cache 1.6.4
backports.tempfile 1.0
backports.weakref 1.0.post1
bcrypt 3.2.0
beautifulsoup4 4.11.1
binaryornot 0.4.4
biopython 1.78
bitarray 2.5.1
bkcharts 0.2
black 22.6.0
bleach 4.1.0
bokeh 2.0.2
bokeh 2.4.3
boto3 1.24.28
botocore 1.27.28
brotlipy 0.7.0
bytecode 0.13.0.dev0
cachetools 4.2.2
certifi 2022.6.15
certifi 2022.9.14
cffi 1.13.2
cffi 1.15.0
cffi 1.15.1
channels 2.2.0
channels 2.4.0
chardet 4.0.0
charset-normalizer 2.0.4
click 8.0.4
cloudpickle 2.0.0
clyent 1.2.2
colorama 0.4.5
colorcet 2.0.5
colorcet 3.0.0
commonmark 0.9.1
conda-build 3.22.0
conda-content-trust 0.1.3
conda-pack 0.6.0
conda-package-handling 1.9.0
conda-repo-cli 1.0.20
conda-token 0.4.0
conda-verify 3.4.2
conda 22.11.1
conda 22.9.0
connection-pool 0.0.3
constantly 15.1.0
contourpy 1.0.7
cookiecutter 1.7.3
coverage 5.3
cryptography 3.3.2
cryptography 37.0.1
cssselect 1.1.0
cutadapt 3.5
cutadapt 4.1
cycler 0.11.0
cytoolz 0.11.0
daal4py 2021.6.0
daphne 2.4.1
dask 2022.7.0
datashader 0.14.1
datashape 0.5.4
datrie 0.8.2
dbus-python 1.2.18
debugpy 1.5.1
decorator 5.1.1
defusedxml 0.7.1
diff-match-patch 20200713
dill 0.3.4
distributed 2022.7.0
distro-info 1.1build1
django 2.2.28
dnaio 0.9.0
docutils 0.18.1
dpath 2.0.6
dropbox 11.14.0
entrypoints 0.4
et-xmlfile 1.1.0
executing 0.8.3
fastjsonschema 2.15.1
fastjsonschema 2.16.2
filechunkio 1.8
filelock 3.6.0
flake8 4.0.1
fonttools 4.25.0
fonttools 4.39.2
frozenlist 1.2.0
fsspec 2022.7.1
ftputil 5.0.4
future 0.18.2
gensim 4.1.2
gitdb 4.0.7
glob2 0.7
gmpy2 2.1.2
google-api-core 2.8.2
google-api-python-client 2.54.0
google-auth-httplib2 0.1.0
google-auth 2.6.0
google-cloud-core 2.2.2
google-cloud-storage 1.43.0
google-crc32c 1.1.2
google-resumable-media 1.3.1
googleapis-common-protos 1.56.4
greenlet 1.1.1
grpcio 1.42.0
h5py 3.7.0
holoviews 1.13.2
holoviews 1.15.0
html5lib 1.1
httplib2 0.20.4
hvplot 0.5.2
hvplot 0.8.0
hyperlink 20.0.1
hyperlink 21.0.0
idna 2.8
idna 3.3
imagecodecs 2021.8.26
imageio 2.19.3
imagesize 1.4.1
importlib-metadata 4.11.3
importlib-resources 5.2.0
incremental 21.3.0
inflection 0.5.1
iniconfig 1.1.1
intake 0.6.5
intervaltree 3.1.0
ipykernel 6.15.2
ipython-genutils 0.2.0
ipython 7.31.1
ipython 8.4.0
ipywidgets 7.6.5
isal 0.11.1
isort 5.9.3
itemadapter 0.3.0
itemloaders 1.0.4
itsdangerous 2.0.1
jdcal 1.4.1
jedi 0.18.1
jeepney 0.7.1
jellyfish 0.9.0
jinja2-time 0.2.0
jinja2 3.0.1
jmespath 0.10.0
joblib 1.1.0
json5 0.9.6
jsonschema 4.16.0
jsonschema 4.4.0
jupyter-console 6.4.3
jupyter-core 4.10.0
jupyter-server 1.18.1
jupyter 1.0.0
jupyter_client 7.3.4
jupyter_core 4.11.1
jupyterlab-pygments 0.1.2
jupyterlab-server 2.10.3
jupyterlab-widgets 1.0.0
jupyterlab 3.4.4
keyring 23.4.0
kiwisolver 1.4.2
kiwisolver 1.4.4
lazy-object-proxy 1.6.0
libarchive-c 2.9
llvmlite 0.38.0
locket 1.0.0
logmuse 0.2.6
lxml 4.9.1
lz4 3.1.3
matplotlib-inline 0.1.2
matplotlib-inline 0.1.6
matplotlib 3.5.2
matplotlib 3.7.1
mccabe 0.7.0
mistune 0.8.4
mkl-fft 1.3.1
mkl-random 1.2.2
mkl-service 2.4.0
mock 4.0.3
mpmath 1.2.1
msgpack 1.0.3
multidict 5.2.0
multipledispatch 0.6.0
munkres 1.1.4
mypy-extensions 0.4.3
mypy 0.902
mypy 0.931
navigator-updater 0.3.0
nbclassic 0.3.5
nbclient 0.5.13
nbconvert 6.4.4
nbformat 5.3.0
nbformat 5.5.0
nest-asyncio 1.5.5
networkx 2.8.4
nltk 3.7
nose 1.3.7
notebook 6.4.12
numba 0.55.1
numexpr 2.8.3
numpy 1.21.0
numpy 1.21.5
numpy 1.22.3
numpydoc 1.4.0
oauth2client 4.1.3
olefile 0.46
openpyxl 3.0.10
packaging 20.0
packaging 21.3
pandas 0.25.3
pandas 1.4.3
pandas 1.4.4
pandocfilters 1.5.0
panel 0.13.1
panel 0.9.3
param 1.12.0
param 1.9.3
paramiko 2.8.1
parsel 1.6.0
parso 0.8.3
partd 1.2.0
pathlib 1.0.1
pathspec 0.9.0
patsy 0.5.2
pep8 1.7.1
peppy 0.32.0
pexpect 4.8.0
pickleshare 0.7.5
pip 22.1.2
pip 22.2.2
pkginfo 1.8.2
plac 1.3.4
platformdirs 2.5.2
plotly 5.9.0
pluggy 1.0.0
ply 3.11
poyo 0.5.0
prettytable 3.3.0
prometheus-client 0.14.1
prompt-toolkit 3.0.20
protobuf 3.20.1
psutil 5.9.0
ptyprocess 0.7.0
pure-eval 0.2.2
py 1.11.0
pyOpenSSL 19.1.0
pyOpenSSL 22.0.0
pyasn1-modules 0.2.7
pyasn1-modules 0.2.8
pyasn1 0.4.8
pycodestyle 2.8.0
pycosat 0.6.3
pycparser 2.19
pycparser 2.21
pyct 0.4.6
pyct 0.4.8
pycurl 7.45.1
pydata-sphinx-theme 0.9.0
pydocstyle 6.1.1
pyerfa 2.0.0
pyflakes 2.4.0
pylint 2.14.5
pyls-spyder 0.4.0
pyodbc 4.0.34
pyparsing 2.4.6
pyparsing 3.0.4
pyparsing 3.0.9
pyrsistent 0.18.0
pysam 0.18.0
pysamstats 1.1.2
pysftp 0.2.9
pytest 7.1.2
python-apt 2.4.0 ubuntu1
python-dateutil 2.8.1
python-dateutil 2.8.2
python-debian 0.1.43ubuntu1
python-irodsclient 1.1.4
python-lsp-black 1.2.1
python-lsp-jsonrpc 1.0.0
python-lsp-server 1.5.0
python-slugify 5.0.2
python-snappy 0.6.0
pytz 2019.3
pytz 2022.1
pyviz-comms 0.7.4
pyviz-comms 2.0.2
pyxdg 0.27
pyzmq 23.2.0
qstylizer 0.1.10
qtconsole 5.3.2
queuelib 1.5.0
ratelimiter 1.2.0
regex 2022.7.9
requests-file 1.5.1
requests 2.28.1
retry 0.9.2
rich 10.16.2
rope 0.22.0
rsa 4.7.2
ruamel-yaml-conda 0.15.100
ruamel.yaml.clib 0.2.6
ruamel.yaml 0.17.21
s3transfer 0.6.0
scikit-image 0.19.2
scikit-learn-intelex 2021.20221004.171807
scikit-learn 1.0.2
scipy 1.8.1
scipy 1.9.1
seaborn 0.11.2
service-identity 18.1.0
setuptools 45
setuptools 61.2.0
setuptools 63.4.1
sip 6.6.2
six 1.13.0
six 1.16.0
slacker 0.14.0
smart-open 5.2.1
smmap 4.0.0
snakemake 7.9.0
sniffio 1.2.0
snowballstemmer 2.2.0
sortedcollections 2.1.0
sortedcontainers 2.4.0
soupsieve 2.3.1
sphinxcontrib-applehelp 1.0.2
sphinxcontrib-devhelp 1.0.2
sphinxcontrib-htmlhelp 2.0.0
sphinxcontrib-jsmath 1.0.1
sphinxcontrib-qthelp 1.0.3
sphinxcontrib-serializinghtml 1.1.5
spyder-kernels 2.3.3
spyder 5.3.3
sqlparse 0.3.0
stack-data 0.2.0
statsmodels 0.13.2
stone 3.2.1
stopit 1.1.2
sympy 1.10.1
tables 3.6.1
tables 3.7.0
tabulate 0.8.10
tblib 1.7.0
tenacity 8.0.1
terminado 0.13.1
testpath 0.6.0
text-unidecode 1.3
textdistance 4.2.1
threadpoolctl 2.2.0
three-merge 0.1.1
tifffile 2021.7.2
tinycss 0.4
tldextract 3.2.0
toml 0.10.2
tomli 2.0.1
tomlkit 0.11.1
toolz 0.11.2
toposort 1.7
tornado 6.0.3
tornado 6.1
tqdm 4.64.1
traitlets 5.1.1
txaio 20.4.1
typing_extensions 4.1.1
typing_extensions 4.3.0
ubiquerg 0.6.2
ubuntu-advantage-tools 8001
ujson 5.4.0
uritemplate 4.1.1
urllib3 1.26.11
urllib3 1.26.9
veracitools 0.1.3
w3lib 1.21.0
watchdog 2.1.6
wcwidth 0.2.5
webencodings 0.5.1
websocket-client 0.58.0
whatthepatch 1.0.2
wheel 0.37.1
widgetsnbextension 3.5.2
wrapt 1.14.1
wurlitzer 3.0.2
xarray 0.20.1
xlrd 2.0.1
xopen 1.2.1
xopen 1.5.0
yapf 0.31.0
yarl 1.6.3
yte 1.5.1
zict 2.1.0
zipp 3.8.0
zope.interface 5.4.0

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

Docker

repbioinfo/detectseq : latest

Dependencies