Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : maven : org.sharegov:mjson

Explore the latest package usage data for org.sharegov:mjson in the maven ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 167
Total downloads: 34,086,308

More details on packages.ecosyste.ms - JSON

broadinstitute/gatk 4.6.1.0

Official release repository for GATK versions 4.x

  • version: 1.4.1
Latest release: 4 months ago - 38,914,712 downloads - 912 dependencies
broadinstitute/picard 3.3.0

A set of Java command line tools for manipulating high-throughput sequencing (HTS) data and formats.

  • version: 1.4.1
Latest release: 4 months ago - 1,241,685 downloads - 640 dependencies
broadinstitute/gtex_rnaseq V10pg

GTEx RNA-seq pipeline: alignment (STAR), QC (RNA-SeQC), expression quantification (RSEM & RNA-SeQC)

  • version: 1.4.1
Latest release: about 1 year ago - 276,836 downloads - 914 dependencies
broadinstitute/terra-jupyter-aou 2.1.13

  • version: 1.4.1
Latest release: about 2 years ago - 96,172 downloads - 4,112 dependencies
nfcore/methylseq 1.6.1

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel.

  • version: 1.4.1
Latest release: over 3 years ago - 95,118 downloads - 297 dependencies
broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 1.4.1
Latest release: 6 months ago - 186,109 downloads - 912 dependencies
nfcore/eager 2.5.2

A Docker image for the nf-core/eager pipeline.

  • version: 1.4.1
Latest release: 7 months ago - 46,224 downloads - 738 dependencies
azul/prime 1.8.0-422-5-24.09.0.0-arm64

azul/prime

  • version: 1.4.1
Latest release: 4 months ago - 27,399 downloads - 168 dependencies
azul/prime-debian 21.0.5-11-24.12.0.0-arm64

azul/prime-debian

  • version: 1.4.1
Latest release: about 2 months ago - 24,945 downloads - 201 dependencies
azul/prime-ubuntu 1.8.0-422-5-24.08.0.0-arm64

azul/prime-ubuntu

  • version: 1.4.1
Latest release: 5 months ago - 17,477 downloads - 198 dependencies
broadinstitute/gatk-dev NVSCOREVARIANTS-PREVIEW-SNAPSHOT

GATK Development

  • version: 1.4.1
Latest release: over 2 years ago - 6,974 downloads - 752 dependencies
azul/prime-centos 21.0.4.0.101-1-24.10.0.0-arm64

azul/prime-centos

  • version: 1.4.1
Latest release: 3 months ago - 12,011 downloads - 193 dependencies
broadinstitute/fungal_gatk4 gatk4.5.0.0

  • version: 1.4.1
Latest release: 9 months ago - 17,549 downloads - 942 dependencies
tetricz/minecraft arm64-build-49

  • version: 1.4.1
Latest release: over 1 year ago - 1,717 downloads - 3 dependencies
panubo/rundeck 4.0.1

  • version: 1.4.1
Latest release: almost 3 years ago - 958 downloads - 1,905 dependencies
intelliseqngs/task_vcf-anno-dbnsfp 1.3.0-chrY-and-the-rest

  • version: 1.4.1
Latest release: almost 2 years ago - 63,873 downloads - 418 dependencies
intelliseqngs/task_vcf-anno-scores 1.2.1-chrY-and-the-rest

  • version: 1.4.1
Latest release: almost 2 years ago - 63,384 downloads - 633 dependencies
intelliseqngs/task_bam-bsqr 1.2.2

  • version: 1.4.1
Latest release: almost 2 years ago - 31,363 downloads - 1,038 dependencies
intelliseqngs/task_bam-filter-mismatch 1.4.1

  • version: 1.4.1
Latest release: almost 2 years ago - 22,135 downloads - 1,138 dependencies
intelliseqngs/snpeff-grch38.104 1.1.3

  • version: 1.4.1
Latest release: over 2 years ago - 17,623 downloads - 273 dependencies
intelliseqngs/gatk dbsnp-genotyping_grch38-no-alt-analysis-set_1.0.4-chrY-and-the-rest

  • version: 1.4.1
Latest release: about 3 years ago - 13,417 downloads - 948 dependencies
nfcore/snpeff 5.1.R64-1-1

snpEff images for nf-core pipelines

  • version: 1.4.1
Latest release: about 2 years ago - 15,194 downloads - 210 dependencies
intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

  • version: 1.4.1
Latest release: almost 2 years ago - 5,139 downloads - 1,140 dependencies
intelliseqngs/igv 3.0.3

  • version: 1.4.1
Latest release: almost 2 years ago - 2,936 downloads - 509 dependencies
intelliseqngs/task_mt-varcall-mutect2 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 2,905 downloads - 1,038 dependencies
intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-grch38-no-alt 1.0.2-chrY-and-the-rest

  • version: 1.4.1
Latest release: almost 2 years ago - 2,475 downloads - 1,040 dependencies
intelliseqngs/gatk-4.2.0.0 1.0.0

  • version: 1.4.1
Latest release: almost 4 years ago - 2,317 downloads - 957 dependencies
intelliseqngs/task_vcf-concat 1.0.4

  • version: 1.4.1
Latest release: almost 2 years ago - 3,244 downloads - 1,043 dependencies
intelliseqngs/task_vcf-anno-cosmic 2.1.6

  • version: 1.4.1
Latest release: about 1 year ago - 2,712 downloads - 346 dependencies
intelliseqngs/task_mt-realign 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 2,048 downloads - 1,038 dependencies
intelliseqngs/task_bam-gatk-m2 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 2,129 downloads - 1,038 dependencies
intelliseqngs/task_vcf-varcall-metrics-hg38 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 2,063 downloads - 1,038 dependencies
intelliseqngs/gatk-4.2.0.0-grch38-no-alt 1.1.0

  • version: 1.4.1
Latest release: over 3 years ago - 1,705 downloads - 957 dependencies
intelliseqngs/task_vcf-prepare 1.0.4

  • version: 1.4.1
Latest release: 9 months ago - 1,387 downloads - 1,038 dependencies
intelliseqngs/gatk-4.2.4.1-grch38-no-alt 1.0.0

  • version: 1.4.1
Latest release: about 3 years ago - 618 downloads - 946 dependencies
intelliseqngs/task_bed-to-interval-list 1.1.5

  • version: 1.4.1
Latest release: almost 2 years ago - 798 downloads - 1,057 dependencies
intelliseqngs/task_vcf-anno-snpeff-grch38.107 1.1.0

  • version: 1.4.1
Latest release: over 1 year ago - 6,199 downloads - 492 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws latest

  • version: 1.4.1
Latest release: about 2 years ago - 403 downloads - 849 dependencies
intelliseqngs/gatk-4.2.4.1-hg38 1.0.0

  • version: 1.4.1
Latest release: about 3 years ago - 367 downloads - 946 dependencies
intelliseqngs/task_vcf-concat-beagle 1.1.3

  • version: 1.4.1
Latest release: almost 2 years ago - 389 downloads - 1,041 dependencies
intelliseqngs/task_vcf-vqsr-snp-recalib-hg38 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 341 downloads - 1,038 dependencies
intelliseqngs/task_genotype-gvcf-on-dbsnp-positions-hg38 1.0.2-chrY-and-the-rest

  • version: 1.4.1
Latest release: almost 2 years ago - 707 downloads - 1,040 dependencies
intelliseqngs/task_vcf-vqsr-indel-recalib-hg38 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 339 downloads - 1,142 dependencies
doejgi/synbioqc-pbj 3.3.2

  • version: 1.4.1
Latest release: 9 months ago - 762 downloads - 1,105 dependencies
doejgi/synbioqc-dual_barcode 1.3.9

version of SynBioQC PacBio sequence validation pipeline for highly similar synthetic constructs

  • version: 1.4.1
Latest release: 9 months ago - 907 downloads - 1,113 dependencies
intelliseqngs/task_pileup-merge 1.0.2

  • version: 1.4.1
Latest release: almost 2 years ago - 331 downloads - 1,038 dependencies
flomicsbiotech/flomics_qc_rnaseq dev

  • version: 1.4.1
Latest release: over 1 year ago - 17,687 downloads - 235 dependencies
intelliseqngs/bcl-to-fq 1.0.2

  • version: 1.4.1
Latest release: almost 2 years ago - 191 downloads - 1,047 dependencies
intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

  • version: 1.4.1
Latest release: over 3 years ago - 171 downloads - 1,057 dependencies
trinityctat/batvi devel

  • version: 1.4.1
Latest release: about 2 years ago - 163 downloads - 415 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

  • version: 1.4.1
Latest release: almost 2 years ago - 131 downloads - 1,081 dependencies
intelliseqngs/gatk-4.2.4.1 1.0.1

  • version: 1.4.1
Latest release: about 2 years ago - 168 downloads - 1,118 dependencies
intelliseqngs/resources-pgx-polygenic 1.2.4

  • version: 1.4.1
Latest release: over 1 year ago - 426 downloads - 1,059 dependencies
intelliseqngs/task_bam-metrics-hg38 1.0.2

  • version: 1.4.1
Latest release: almost 2 years ago - 87 downloads - 1,144 dependencies
doejgi/synbioqc-env 6.1.2

  • version: 1.4.1
Latest release: 9 months ago - 162 downloads - 1,083 dependencies
dolphinnext/ont_variant_calling 1.0

  • version: 1.4.1
Latest release: about 2 years ago - 88 downloads - 494 dependencies
intelliseqngs/snpsift 1.2.0

  • version: 1.4.1
Latest release: almost 2 years ago - 105 downloads - 41 dependencies
jlund256/xeno_rna-seq latest

  • version: 1.4.1
Latest release: about 2 years ago - 2,282 downloads - 902 dependencies
evolbioinfo/picard v2.27.0

https://github.com/broadinstitute/picard/

  • version: 1.4.1
Latest release: almost 3 years ago - 83 downloads - 287 dependencies
doejgi/trinityrnaseq-wdl 2.15.1

  • version: 1.4.1
Latest release: almost 2 years ago - 653 downloads - 980 dependencies
ctomlins/rna-seq-pipeline latest

  • version: 1.4.1
Latest release: over 3 years ago - 51 downloads - 498 dependencies
intelliseqngs/task_calibrate-dragstr-model-grch38-no-alt 1.0.1

  • version: 1.4.1
Latest release: almost 2 years ago - 86 downloads - 1,049 dependencies
hoonbiolab/pepatac v1.1

  • version: 1.4.1
Latest release: over 3 years ago - 43 downloads - 1,213 dependencies
skoyamamd/analysis_base latest

neoterm/youcompleteme enabled ubuntu20.04

  • version: 1.4.1
Latest release: over 3 years ago - 34 downloads - 701 dependencies
dolphinnext/beenet 1.0

  • version: 1.4.1
Latest release: about 2 years ago - 35 downloads - 345 dependencies
tetricz/ferium arm64

  • version: 1.4.1
Latest release: over 1 year ago - 717 downloads - 37 dependencies
galclbl/epityping latest

A repository for the epityping tool container

  • version: 1.4.1
Latest release: about 2 years ago - 56 downloads - 123 dependencies
intelliseqngs/pharmcat-resources 1.1.0

  • version: 1.4.1
Latest release: almost 3 years ago - 31 downloads - 964 dependencies
intelliseqngs/openjdk11-picard 3.0.2

  • version: 1.4.1
Latest release: almost 2 years ago - 29 downloads - 243 dependencies
hoonbiolab/revertsam v1.1

  • version: 1.4.1
Latest release: over 3 years ago - 26 downloads - 884 dependencies
polumechanos/sam_to_fastq latest

  • version: 1.4.1
Latest release: almost 2 years ago - 223 downloads - 229 dependencies
intelliseqngs/task_vcf-varcall-metrics-grch38-no-alt 1.1.2

  • version: 1.4.1
Latest release: almost 2 years ago - 26 downloads - 1,038 dependencies
mrkevindc/add latest

  • version: 1.4.1
Latest release: about 2 years ago - 21 downloads - 621 dependencies
crukmi/target-snakemake-docker latest

  • version: 1.4.1
Latest release: over 2 years ago - 21 downloads - 1,148 dependencies
bokebiotech/qcpipe v6

  • version: 1.4.1
Latest release: over 1 year ago - 339 downloads - 1,186 dependencies