broadinstitute/gatk 4.6.2.0

Official release repository for GATK versions 4.x

apachepinot/pinot 1.2.0

Pinot is a real-time distributed OLAP datastore, built to deliver scalable real-time analytics.

scalableminds/webknossos 23.12.0

broadinstitute/picard 3.3.0

A set of Java command line tools for manipulating high-throughput sequencing (HTS) data and formats.

geerlingguy/solr 9.4.1

Apache Solr image built from the Ansible Role geerlingguy.solr

ctomlins/tellread_2022 latest

intelliseqngs/bcl-to-fq 1.0.2

dmiller15/gatk 4.1.7.0R0.1

scalableminds/webknossos-datastore 23.12.0

scalableminds/webknossos-tracingstore 23.12.0

nfcore/eager 2.5.3

A Docker image for the nf-core/eager pipeline.

vanallenlab/sv-pipeline rlc_aou_evidencetable_fix

intelliseqngs/task_bam-metrics-hg38 1.0.2

testlagoon/solr-8-drupal pr-1452

testlagoon/solr-8 pr-1452

fjardim/mds-pinot latest

broadinstitute/gatk-nightly 2024-08-17-4.6.0.0-10-g9f2fbb553-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

navoday/hybrisojdk latest

fionahak/gatk_genotube v0.0.1

intelliseqngs/gatk-4.1.9.0 1.0.0

ctomlins/testuniv latest

intelliseqngs/task_bed-to-interval-list 1.1.5

qdidiscoveryservices/gatk-v2461_bwa_aws latest

hoonbiolab/variantannotation_r v1.1

tunguyenlf10/solr-opennlp 0.0.1

qcdis/solr latest

hoonbiolab/vcf-kit v1.1

hoonbiolab/gatk4_scnv v1.1

hoonbiolab/ascat v1.1

rajagile/solr 8.10.1

qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

blackappsolutions/solr-base 1.1-cm-8.11.2

intelliseqngs/gatk-4.2.4.1 1.0.1

ctomlins/testuniv_update latest

intelliseqngs/resources-pgx-polygenic 1.2.4

rahulg603/gatk_samtools_docker latest

skchronicles/genome-seek v0.1.0

Official base image of the genome-seek pipeline: https://github.com/OpenOmics/genome-seek

cenr/appdata latest

intelliseqngs/task_vcf-anno-custom 1.0.1

entando/solr-ocp 8

hoonbiolab/hl_base v1.2

ctomlins/picardtools latest

hoonbiolab/sequenza v1.1

intelliseqngs/task_calibrate-dragstr-model-grch38-no-alt 1.0.1

intelliseqngs/collect-hs-metrics 1.0.0

hoonbiolab/svtools v0.4.0

trust1/ubuntu OMGv001

Target Capture Cloud Platform (TCCP) Oz Mammals Genomics Phylogenomics aka OMG pipeline

man4ish/demuxlet_v3 latest

cenr/solr 8

vanallenlab/sv-pipeline-base gnomad_rf_abd6c1

jlalli/nextflow-condor dev

gru4/scan2workinghg38 latest

gru4/scan2fixedhg38 latest

instituutnederlandsetaal/blacklab-solr 4.0.1

BlackLab as a search component for Apache Solr. Experimental.

hoonbiolab/ngscheckmate v1.1

broadinstitute/gatk-test 4.0-prerelease-1efafd2b5

intelliseqngs/gatk-4.1.9.0-hg38 1.0.0

mkapustapl/test-solr 2023.1.1.28

bokebiotech/qcpipe v6

fkessler/apache-ranger-solr 3.0.0-SNAPSHOT

epinux/solr adc

qdidiscoveryservices/gatk-v2461_bwa_vardict latest

yiluxiangbei/pumpkin-gatk-notebook 1.0

mycoreorg/ubo-solr v2023.06-20250220

bryoinformatics/variant-id v1.0.0

A container for the variant-ID pipeline (https://github.com/bryoinformatics/variant-ID).

nahyunkong/mito v6

dhspence/docker-genomic-analysis-lite 102321

hoonbiolab/sratools v1.1

intelliseqngs/gatk-4.1.6.0-grch38-no-alt 1.0.0

rubelw/ranger-docker-ranger-admin latest

dabbleofdevops/nextneopi 20230817

ctomlins/tseq_2 latest

ctomlins/tseq latest

hoonbiolab/clustersv v1.1

taniguti/picard 3.0.0

uselagoon/solr-8 25.9.0

uselagoon/solr-8-drupal 25.9.0

intelliseqngs/pharmcat-resources 1.1.0

hoonbiolab/mixcr v1.1

hoonbiolab/funcotate v1.1

hoonbiolab/lohhla v1.1

hoonbiolab/star v1.1

skchronicles/genome-seek_trim_map v0.1.1

Official docker image for trimming and alignment with genome-seek

hoonbiolab/pvacseq v1.1

hoonbiolab/imagemagick v1.1

hoonbiolab/prada v1.2

hoonbiolab/msisensor-pro v1.0

hoonbiolab/test2 v1.0