Ecosyste.ms: Docker

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Package Usage : pypi : cutadapt

Explore the latest package usage data for cutadapt in the pypi ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 56
Total downloads: 132,567

More details on packages.ecosyste.ms - JSON

broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 4.1
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
dhspence/docker-smallrnaseq latest

  • version: 1.16
Latest release: over 6 years ago - 789 downloads - 911 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws latest

  • version: 3.7
Latest release: almost 2 years ago - 403 downloads - 849 dependencies
y9ch/bidseq rice

🧪 BID-seq for detecting pseudouridine modification on RNA

  • version: 4.3.dev4 gd24db04
  • vcs_url: git https://github.com/marcelm/cutadapt.git@d24db0466fad671153eed6681f49befba0fbfe05
Latest release: over 1 year ago - 588 downloads - 251 dependencies
ctomlins/testuniv_update latest

  • version: 2.5
Latest release: almost 4 years ago - 153 downloads - 758 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

  • version: 3.7
Latest release: almost 2 years ago - 131 downloads - 1,081 dependencies
ctomlins/supernova v2.1.1

  • version: 1.16
Latest release: about 6 years ago - 120 downloads - 297 dependencies
alexwaldrop/reads2variants v0.0

  • version: 4.1
Latest release: almost 2 years ago - 90 downloads - 660 dependencies
felixschlesinger/scalerna test_bam_write

  • version: 4.2
Latest release: almost 1 year ago - 34,541 downloads - 241 dependencies
ctomlins/trim_galore latest

  • version: 2.8
Latest release: about 3 years ago - 77 downloads - 357 dependencies
ctomlins/testuniv latest

  • version: 2.5
Latest release: almost 3 years ago - 69 downloads - 536 dependencies
onurcanbektas/axolotl.rulands.yun latest

  • version: 3.5
Latest release: almost 2 years ago - 89 downloads - 459 dependencies
biocontainers/python3-cutadapt v1.12-2-deb_cv1

  • version: 1.12
Latest release: over 6 years ago - 55 downloads - 108 dependencies
dhspence/encode-atac 1

encode atac pipeline docker image

  • version: 1.9.1
Latest release: almost 6 years ago - 55 downloads - 705 dependencies
ctomlins/supertellnova latest

  • version: 1.16
Latest release: almost 4 years ago - 51 downloads - 309 dependencies
biocontainers/python-cutadapt v1.12-2-deb_cv1

  • version: 1.12
Latest release: over 6 years ago - 43 downloads - 109 dependencies
mbwali/jupyterlab qiime2023

  • version: 4.2
Latest release: over 1 year ago - 56 downloads - 1,941 dependencies
ctomlins/tellread_2022 latest

  • version: 2.5
Latest release: almost 2 years ago - 34 downloads - 711 dependencies
ctomlins/bcl2fastq latest

  • version: 1.16
Latest release: over 3 years ago - 28 downloads - 474 dependencies
jpsmith5/peppro latest

  • version: 4.1
Latest release: almost 2 years ago - 29 downloads - 1,163 dependencies
bryoinformatics/rna-seq v1.0.0

A container for the RNAseq pipeline (https://github.com/bryoinformatics/RNAseq).

  • version: 1.18, 4.3
Latest release: over 1 year ago - 140 downloads - 188 dependencies
biodancer/nasap_performance latest

write later

  • version: 3.5
Latest release: almost 2 years ago - 18 downloads - 2,006 dependencies
qdidiscoveryservices/gatk-v2461_bwa_vardict latest

  • version: 3.7
Latest release: over 1 year ago - 15 downloads - 1,069 dependencies
bryoinformatics/variant-id v1.0.0

A container for the variant-ID pipeline (https://github.com/bryoinformatics/variant-ID).

  • version: 4.3, 4.2
Latest release: over 1 year ago - 93 downloads - 479 dependencies
aminhaghparast/genomics21 2.12

  • version: 1.16
Latest release: almost 2 years ago - 12 downloads - 522 dependencies
sebrauschert/amplicon_pipeline v0.3.2

A pipeline for amplicon sequencing analysis of marine fish

  • version: 3.2, 4.1
Latest release: over 1 year ago - 60 downloads - 571 dependencies
gesiscss/binder-mortonjt-2dq2stats-2dworkshops-912d21 82c8b562545acab37a854f097c33806fa7c2a4b3

  • version: 2.10
Latest release: over 3 years ago - 11 downloads - 1,679 dependencies
shiramaty/qiime2-sratools latest

  • version: 4.1
Latest release: almost 2 years ago - 11 downloads - 319 dependencies
bixbeta/czid v3

  • version: 3.2
Latest release: over 1 year ago - 12 downloads - 421 dependencies
djbradshaw2/trimgalore latest

  • version: 4.1
Latest release: almost 2 years ago - 10 downloads - 56 dependencies
ctomlins/tseq latest

  • version: 2.5
Latest release: about 4 years ago - 10 downloads - 536 dependencies
ctomlins/tseq_2 latest

  • version: 2.5
Latest release: about 4 years ago - 10 downloads - 538 dependencies
quiestrho/crabs 1.0.0

  • version: 3.5
Latest release: almost 2 years ago - 9 downloads - 24 dependencies
sebimer/samba-v4-qiime2 2022.11

  • version: 4.2
Latest release: almost 2 years ago - 49 downloads - 583 dependencies
emersonchao/dsc180b latest

  • version: 4.2
Latest release: almost 2 years ago - 50 downloads - 2,266 dependencies
bixbeta/cluster_profiler v1

  • version: 3.2
Latest release: almost 2 years ago - 8 downloads - 1,038 dependencies
sbouslama/sb-mpxv-nf alpha3

  • version: 0.0.0
Latest release: over 1 year ago - 265 downloads - 907 dependencies
ethill/qiime2 latest

docker container for qiime2

  • version: 4.2
Latest release: almost 2 years ago - 8 downloads - 1,935 dependencies
repbioinfo/detectseq latest

  • version: 3.5, 4.1
Latest release: over 1 year ago - 11 downloads - 2,183 dependencies
bixbeta/pavian v1

  • version: 3.2
Latest release: almost 2 years ago - 8 downloads - 388 dependencies
brianyee/rnaseq snakemake_1.0.0

  • version: 4.4
Latest release: over 1 year ago - 38 downloads - 2,387 dependencies
jorgeamaya/dada2_terra_iseq v1

  • version: 4.4
Latest release: about 1 year ago - 390 downloads - 967 dependencies
salvacasani/trimming latest

  • version: 3.5
Latest release: over 1 year ago - 152 downloads - 238 dependencies
bac3/microbiome latest

16S rRNA gene meta-barcoding NGS data analysis app - microbioma batterico. App streamlit.

  • version: 4.2
Latest release: over 1 year ago - 134 downloads - 752 dependencies
ctomlins/cutadapt latest

  • version: 4.4
Latest release: about 1 year ago - 122 downloads - 263 dependencies
shengqh/cqs_smallrnaseq latest

  • version: 4.5
Latest release: 10 months ago - 133 downloads - 1,416 dependencies
globusgenomics/picrust 1.0

  • version: 3.7
Latest release: almost 2 years ago - 77 downloads - 595 dependencies
andrewatmp/qiime_unzip latest

  • version: 4.4
Latest release: about 1 year ago - 93 downloads - 598 dependencies
harshaldeokar/us_medgenome_v12 latest

  • version: 2.5
Latest release: over 1 year ago - 55 downloads - 2,611 dependencies
lorentzb/srs 2.0

  • version: 2.10
Latest release: over 1 year ago - 45 downloads - 269 dependencies
jlphillips/csci 2024-Spring

MTSU Department of Computer Science Stack

  • version: 4.4
Latest release: 10 months ago - 432 downloads - 3,721 dependencies
jorgeamaya/ci_barcode_terra_dada2_iseq v1

  • version: 4.4
Latest release: over 1 year ago - 36 downloads - 483 dependencies
wyangwu/r4.1.2 latest

  • version: 2.8
Latest release: over 1 year ago - 67 downloads - 827 dependencies
wilfriedguiblet/ctk v0.1

  • version: 4.3
Latest release: over 1 year ago - 84 downloads - 156 dependencies
ahr1/demultiplex latest

  • version: 4.2
Latest release: almost 2 years ago - 32 downloads - 95 dependencies
paulotaugc/16scan-metagenomics v2

  • version: 4.4
Latest release: about 1 year ago - 32 downloads - 776 dependencies