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sgiamberardinorti/dge_analysis : 202304171546_x86_64

Latest release: over 1 year ago - 102 downloads - 1,881 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.60.2
BH 1.81.0-1
Biobase 2.58.0
BiocGenerics 0.44.0
BiocManager 1.30.20
BiocParallel 1.32.6
BiocVersion 3.16.0
Biostrings 2.66.0
DBI 1.1.3
DESeq2 1.38.3
DEoptimR 1.0-12
DelayedArray 0.24.0
DescTools 0.99.48
DiceDesign 1.9
Exact 3.2
Formula 1.2-5
GPfit 1.0-8
GenomeInfoDb 1.34.9
GenomeInfoDbData 1.2.9
GenomicRanges 1.50.2
Hmisc 5.0-1
IHW 1.26.0
IRanges 2.32.0
IRdisplay 1.1
IRkernel 1.3.2
KEGGREST 1.38.0
KernSmooth 2.23-20
MASS 7.3-58.3
Matrix 1.5-4
MatrixGenerics 1.10.0
ModelMetrics 1.2.2.2
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
RODBC 1.3-19
RODBC 1.3-20
RSQLite 2.3.1
Rcpp 1.0.10
RcppArmadillo 0.12.2.0.0
RcppEigen 0.3.3.9.3
RcppNumerical 0.5-0
S4Vectors 0.36.2
SQUAREM 2021.1
SummarizedExperiment 1.28.0
TH.data 1.1-1
XML 3.99-0.14
XVector 0.38.0
annotate 1.76.0
apeglm 1.20.0
argparse 2.2.2
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.1.2
base 4.2.3
bbmle 1.0.25
bdsmatrix 1.3-6
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
blob 1.2.4
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
callr 3.7.3
broom 1.0.4
bslib 0.4.2
cachem 1.0.7
caret 6.0-94
cellranger 1.1.0
checkmate 2.1.0
class 7.3-21
cli 3.6.1
clipr 0.8.0
clock 0.6.1
cluster 2.1.4
coda 0.19-4
codetools 0.2-19
coin 1.4-2
colorspace 2.1-0
commonmark 1.9.0
compiler 4.1.2
compiler 4.2.3
conflicted 1.2.0
cpp11 0.4.3
crayon 1.5.2
credentials 1.3.2
curl 5.0.0
data.table 1.14.8
datasets 4.1.2
datasets 4.2.3
dbplyr 2.3.2
desc 1.4.2
devtools 2.4.5
diagram 1.6.5
dials 1.2.0
diffobj 0.3.5
digest 0.6.31
downlit 0.4.2
dplyr 1.1.1
dtplyr 1.3.1
e1071 1.7-13
edgeR 3.40.2
ellipsis 0.3.2
emdbook 1.3.12
evaluate 0.20
expm 0.999-7
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
fdrtool 1.2.17
findpython 1.0.8
fontawesome 0.5.0
forcats 1.0.0
foreach 1.5.2
foreign 0.8-84
formatR 1.14
fs 1.6.1
furrr 0.3.1
futile.logger 1.4.3
futile.options 1.0.1
future.apply 1.10.0
future 1.32.0
gargle 1.4.0
genefilter 1.80.0
geneplotter 1.76.0
generics 0.1.3
gert 1.9.2
ggplot2 3.4.2
ggrepel 0.9.3
ggridges 0.5.4
ggsci 3.0.0
gh 1.4.0
gitcreds 0.1.2
gld 2.6.6
globals 0.16.2
glue 1.6.2
googledrive 2.1.0
googlesheets4 1.1.0
gower 1.0.1
grDevices 4.1.2
grDevices 4.2.3
graphics 4.1.2
graphics 4.2.3
grid 4.1.2
grid 4.2.3
gridExtra 2.3
gtable 0.3.3
hardhat 1.3.0
haven 2.5.2
highr 0.10
hms 1.1.3
htmlTable 2.4.1
htmltools 0.5.5
htmlwidgets 1.6.2
httpuv 1.6.9
httr2 0.2.2
httr 1.4.5
ids 1.0.1
infer 1.0.4
ini 0.3.1
ipred 0.9-14
isoband 0.2.7
iterators 1.0.14
jquerylib 0.1.4
jsonlite 1.8.4
knitr 1.42
labeling 0.4.2
lambda.r 1.2.4
later 1.3.0
lattice 0.21-8
lava 1.7.2.1
lhs 1.1.6
libcoin 1.0-9
lifecycle 1.0.3
limma 3.54.2
listenv 0.9.0
lmom 2.9
lmtest 0.9-40
locfit 1.5-9.7
lpsymphony 1.26.3
lsr 0.5.2
lubridate 1.9.2
magrittr 2.0.3
matrixStats 0.63.0
memoise 2.0.1
methods 4.1.2
methods 4.2.3
mgcv 1.8-42
mime 0.12
miniUI 0.1.1.1
modeldata 1.1.0
modelenv 0.1.1
modelr 0.1.11
modeltools 0.2-23
multcomp 1.4-23
multcompView 0.1-9
munsell 0.5.0
mvtnorm 1.1-3
mvtnormAPI 1.0-0
nlme 3.1-162
nnet 7.3-18
nortest 1.0-4
numDeriv 2016.8-1.1
omixjutsu 0.0.0.9005
openssl 2.0.6
org.testing.db 0.1
pROC 1.18.0
parallel 4.1.2
parallel 4.2.3
parallelly 1.35.0
parsnip 1.1.0
patchwork 1.1.2
pbdZMQ 0.3-9
pillar 1.9.0
pkgbuild 1.4.0
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2
plogr 0.2.0
plyr 1.8.8
png 0.1-8
praise 1.0.0
prettyunits 1.1.1
processx 3.8.0
prodlim 2023.03.31
profvis 0.3.7
progress 1.2.2
progressr 0.13.0
promises 1.2.0.1
proxy 0.4-27
ps 1.7.4
purrr 1.0.1
ragg 1.2.5
rappdirs 0.3.3
rcmdcheck 1.4.0
rcompanion 2.4.26
readr 2.1.4
readxl 1.4.2
recipes 1.0.5
rematch2 2.1.2
rematch 1.0.1
remotes 2.4.2
repr 1.1.6
reprex 2.0.2
reshape2 1.4.4
rlang 1.1.0
rmarkdown 2.21
robustbase 0.95-1
rootSolve 1.8.2.3
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rsample 1.1.1
rstudioapi 0.14
rversions 2.1.2
rvest 1.0.3
sandwich 3.0-2
sass 0.4.5
scales 1.2.1
selectr 0.4-2
sessioninfo 1.2.2
shape 1.4.6
shiny 1.7.4
slam 0.1-50
slider 0.3.0
snow 0.4-4
sourcetools 0.1.7-1
splines 4.1.2
splines 4.2.3
stats4 4.1.2
stats4 4.2.3
stats 4.1.2
stats 4.2.3
stringi 1.7.12
stringr 1.5.0
survival 3.5-5
sys 3.4.1
systemfonts 1.0.4
tcltk 4.1.2
tcltk 4.2.3
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.7
textshaping 0.3.6
tibble 3.2.1
tidymodels 1.0.0
tidyr 1.3.0
tidyselect 1.2.0
tidyverse 2.0.0
timeDate 4022.108
timechange 0.2.0
tinytex 0.44
tools 4.1.2
tools 4.2.3
translations 4.1.2
translations 4.2.3
tune 1.1.1
tzdb 0.3.0
urlchecker 1.0.1
usethis 2.1.6
utf8 1.2.3
utils 4.1.2
utils 4.2.3
uuid 1.1-0
vctrs 0.6.1
viridis 0.6.2
viridisLite 0.4.1
vroom 1.6.1
waldo 0.4.0
warp 0.2.0
whisker 0.4.1
withr 2.5.0
workflows 1.1.3
workflowsets 1.0.1
xfun 0.38
xml2 1.3.3
xopen 1.0.0
xtable 1.8-4
yaml 2.3.7
yardstick 1.1.0
zip 2.2.2
zlibbioc 1.44.0
zoo 1.8-12

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ubuntu/autoconf 2.71-2
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bash 5.1.16
python 3.10.10

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