Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

jonasmrr/scrnaseq-pipeline : latest

Latest release: over 1 year ago - 35 downloads - 356 dependencies

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Dependencies

@PKGNAME@ @VERSION@
BH 1.81.0-1
Biobase 2.58.0
BiocGenerics 0.44.0
BiocNeighbors 1.16.0
BiocParallel 1.32.5
BiocSingular 1.14.0
Cairo 1.6-0
DelayedArray 0.24.0
DelayedMatrixStats 1.20.0
DropletUtils 1.18.0
FNN 1.1.3.2
GenomeInfoDb 1.34.8
GenomeInfoDbData 1.2.9
GenomicRanges 1.50.0
HDF5Array 1.26.0
IRanges 2.32.0
KernSmooth 2.23-20
MASS 7.3-58.3
Matrix 1.5-4
MatrixGenerics 1.10.0
R.cache 0.16.0
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.10
RSpectra 0.16-1
Rcpp 1.0.10
RcppAnnoy 0.0.20
RcppEigen 0.3.3.9.3
RcppHNSW 0.4.1
RcppML 0.3.7
RcppParallel 5.1.6
RcppProgress 0.4.2
RcppProgressArmadillo 0.2
RcppProgressETA 0.1
RcppProgressExample 0.2
RcppTOML 0.2.2
Rhdf5lib 1.20.0
Rtsne 0.16
S4Vectors 0.36.0
ScaledMatrix 1.6.0
SingleCellExperiment 1.20.0
SummarizedExperiment 1.28.0
XVector 0.38.0
askpass 1.1
backports 1.4.1
base64enc 0.1-3
base 4.2.2
beachmat 2.14.0
beachtest 1.0.0
beeswarm 0.4.0
bitops 1.0-7
bluster 1.8.0
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
callr 3.7.3
class 7.3-21
cli 3.6.1
cluster 2.1.4
codetools 0.2-19
collections 0.3.7
colorspace 2.1-0
commonmark 1.9.0
compiler 4.2.2
coro 1.0.3
cpp11 0.4.3
crayon 1.5.2
curl 4.3.3
cyclocomp 1.1.0
data.table 1.14.8
datasets 4.2.2
desc 1.4.2
diffobj 0.3.5
digest 0.6.31
dqrng 0.3.0
edgeR 3.40.0
ellipsis 0.3.2
evaluate 0.20
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
foreign 0.8-84
formatR 1.14
fs 1.6.1
futile.logger 1.4.3
futile.options 1.0.1
ggbeeswarm 0.7.1
ggplot2 3.4.2
ggrastr 1.0.1
ggrepel 0.9.3
glue 1.6.2
grDevices 4.2.2
graphics 4.2.2
grid 4.2.2
gridExtra 2.3
gtable 0.3.3
here 1.0.1
highr 0.10
htmltools 0.5.5
httr 1.4.5
igraph 1.4.2
irlba 2.3.5.1
isoband 0.2.7
jsonlite 1.8.4
knitr 1.42
labeling 0.4.2
lambda.r 1.2.4
languageserver 0.0.0.9000
languageserver 0.3.15
lattice 0.21-8
lazyeval 0.2.2
lifecycle 1.0.3
limma 3.54.0
lintr 3.0.2
locfit 1.5-9.7
logger.tester 0.1
logger 0.2.2
magrittr 2.0.3
matrixStats 0.63.0
metapod 1.6.0
methods 4.2.2
mgcv 1.8-42
mime 0.12
morebeach 1.0.0
morebeachtests 1.0.0
munsell 0.5.0
nlme 3.1-162
nnet 7.3-18
openssl 2.0.2
parallel 4.2.2
pheatmap 1.0.12
pillar 1.9.0
pkgconfig 2.0.3
pkgload 1.3.2
png 0.1-8
praise 1.0.0
processx 3.8.1
ps 1.7.5
purrr 1.0.1
ragg 1.2.5
rappdirs 0.3.3
rematch2 2.1.2
remotes 2.4.2
repr 1.1.6
reticulate 1.25
rex 1.2.1
rhdf5 2.42.0
rhdf5filters 1.10.0
rlang 1.1.0
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rstudioapi 0.14
rsvd 1.0.5
scales 1.2.1
scater 1.26.0
scran 1.26.0
scuttle 1.8.0
sitmo 2.0.2
snow 0.4-4
sparseMatrixStats 1.10.0
spatial 7.3-16
splines 4.2.2
statmod 1.5.0
stats4 4.2.2
stats 4.2.2
stringdist 0.9.10
stringi 1.7.12
stringr 1.5.0
styler 1.9.1
survival 3.5-5
sys 3.4.1
systemfonts 1.0.4
tcltk 4.2.2
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.7
textshaping 0.3.6
tibble 3.2.1
tools 4.2.2
translations 4.2.2
utf8 1.2.3
utils 4.2.2
uwot 0.1.14
vctrs 0.6.2
vipor 0.4.5
viridis 0.6.2
viridisLite 0.4.1
waldo 0.4.0
withr 2.5.0
xfun 0.38
xml2 1.3.3
xmlparsedata 1.0.5
yaml 2.3.5
zlibbioc 1.44.0

bash 5.1.4
python 3.10.10
python 3.8.16

js 1.0.0

Jinja2 3.1.2
MarkupSafe 2.1.2
Pillow 9.4.0
PySocks 1.7.1
PyYAML 6.0
Pygments 2.15.1
Wand 0.6.11
anndata2ri 1.1
anndata 0.9.1
antlr4-python3-runtime 4.9.3
argcomplete 3.0.5
asttokens 2.2.1
attrs 22.1.0
backcall 0.2.0
backports.functools-lru-cache 1.6.4
backports.zoneinfo 0.2.1
beautifulsoup4 4.11.1
black 23.3.0
bleach 4.1.0
boltons 23.0.0
brotlipy 0.7.0
bytecode 0.13.0.dev0
cached-property 1.5.2
certifi 2022.12.7
cffi 1.15.1
charset-normalizer 3.1.0
click 8.1.3
colorama 0.4.6
comm 0.1.3
conda-content-trust 0.1.3
conda-package-handling 1.9.0
conda 23.3.1
contourpy 1.0.7
cryptography 39.0.0
cycler 0.11.0
debugpy 1.6.7
decorator 5.1.1
defusedxml 0.7.1
dunamai 1.16.0
entrypoints 0.4
executing 1.2.0
fastjsonschema 2.16.2
flake8 6.0.0
fonttools 4.39.3
get_version 3.5.4
h5py 3.8.0
html5lib 1.1
idna 3.4
igraph 0.10.4
importlib-metadata 6.5.0
importlib-resources 5.12.0
ipykernel 6.22.0
ipython 8.12.0
jedi 0.18.2
joblib 1.2.0
jsonpatch 1.32
jsonpointer 2.1
jsonschema 4.16.0
jupyter_client 8.2.0
jupyter_core 5.3.0
jupyterlab-pygments 0.1.2
kiwisolver 1.4.4
leidenalg 0.9.1
llvmlite 0.39.1
lxml 4.9.2
matplotlib-inline 0.1.6
matplotlib 3.7.1
mccabe 0.7.0
mistune 0.8.4
munkres 1.1.4
mypy-extensions 1.0.0
natsort 8.3.1
nbclient 0.5.13
nbconvert 6.5.4
nbformat 5.7.0
nest-asyncio 1.5.6
networkx 3.1
numba 0.56.4
numpy 1.23.5
omegaconf 2.3.0
packaging 23.1
pandas 2.0.0
pandocfilters 1.5.0
parso 0.8.3
pathspec 0.11.1
patsy 0.5.3
pexpect 4.8.0
pickleshare 0.7.5
pip 22.0.4
pip 23.1
pkgutil_resolve_name 1.3.10
platformdirs 3.2.0
pluggy 1.0.0
pooch 1.7.0
prompt-toolkit 3.0.38
psutil 5.9.5
ptyprocess 0.7.0
pure-eval 0.2.2
pyOpenSSL 23.1.1
pycodestyle 2.10.0
pycosat 0.6.4
pycparser 2.21
pyflakes 3.0.1
pynndescent 0.5.9
pyparsing 3.0.9
pyrsistent 0.18.0
python-dateutil 2.8.2
pytz-deprecation-shim 0.1.0.post0
pytz 2023.3
pyzmq 25.0.2
requests 2.28.1
requests 2.28.2
rpy2 3.5.11
ruamel.yaml 0.16.0
scanpy 1.9.3
scikit-learn 1.2.2
scipy 1.10.1
seaborn 0.12.2
session-info 1.0.0
setuptools 57.5.0
setuptools 67.6.1
simplegeneric 0.8.1
six 1.16.0
soupsieve 2.3.2.post1
stack-data 0.6.2
statsmodels 0.13.5
stdlib-list 0.8.0
texttable 1.6.7
threadpoolctl 3.1.0
tinycss2 1.2.1
toml 0.10.2
tomli 2.0.1
tomlkit 0.11.7
toolz 0.12.0
tornado 6.3
tqdm 4.65.0
traitlets 5.9.0
typing_extensions 4.5.0
tzdata 2023.3
tzlocal 4.3
umap-learn 0.5.3
unicodedata2 15.0.0
urllib3 1.26.15
wcwidth 0.2.6
webencodings 0.5.1
wheel 0.40.0
xmltodict 0.13.0
yq 3.2.1
zipp 3.15.0