Ecosyste.ms: Docker

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hoonbiolab/hmftools : v1.1

Latest release: over 3 years ago - 1,223 downloads - 693 dependencies

Dependencies

@PKGNAME@ @PKGVERSION@
@PKGNAME@ @VERSION@
AnnotationDbi 1.54.0
AnnotationDbi 1.54.1
BH 1.75.0-0
BSgenome 1.60.0
Biobase 2.52.0
BiocFileCache 2.0.0
BiocGenerics 0.38.0
BiocIO 1.2.0
BiocManager 1.30.16
BiocParallel 1.26.0
BiocParallel 1.26.2
BiocVersion 3.13.1
Biostrings 2.60.0
Biostrings 2.60.2
Cairo 1.5-12.2
DBI 1.1.1
DelayedArray 0.18.0
GenomeInfoDb 1.28.0
GenomeInfoDb 1.28.4
GenomeInfoDbData 1.2.6
GenomicAlignments 1.28.0
GenomicFeatures 1.44.0
GenomicRanges 1.44.0
IRanges 2.26.0
KEGGREST 1.32.0
MASS 7.3-54
Matrix 1.3-4
MatrixGenerics 1.4.0
MatrixGenerics 1.4.3
R6 2.5.1
RColorBrewer 1.1-2
RCurl 1.98-1.5
RSQLite 2.2.8
Rcpp 1.0.7
Rhtslib 1.24.0
Rsamtools 2.8.0
S4Vectors 0.30.0
S4Vectors 0.30.1
SummarizedExperiment 1.22.0
VariantAnnotation 1.38.0
XML 3.99-0.8
XVector 0.32.0
askpass 1.1
assertthat 0.2.1
backports 1.2.1
base64enc 0.1-3
base 4.1.1
biomaRt 2.48.0
bit64 4.0.5
bit 4.0.4
bitops 1.0-7
blob 1.2.2
brio 1.1.2
broom 0.7.9
cachem 1.0.6
callr 3.7.0
cellranger 1.1.0
cli 3.0.1
clipr 0.7.1
colorspace 2.0-2
compiler 4.1.1
copynumber 1.32.0
cowplot 1.1.1
cpp11 0.4.0
crayon 1.4.1
curl 4.3.2
data.table 1.14.2
datasets 4.1.1
dbplyr 2.1.1
desc 1.4.0
diffobj 0.3.4
digest 0.6.28
dplyr 1.0.7
dtplyr 1.1.0
ellipsis 0.3.2
evaluate 0.14
fansi 0.4.2
fansi 0.5.0
farver 2.1.0
fastmap 1.1.0
filelock 1.0.2
forcats 0.5.1
formatR 1.11
fs 1.5.0
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.2.0
generics 0.1.0
getopt 1.20.3
ggplot2 3.3.5
glue 1.4.2
googledrive 2.0.0
googlesheets4 1.0.0
grDevices 4.1.1
graphics 4.1.1
grid 4.1.1
gtable 0.3.0
haven 2.4.3
highr 0.9
hms 1.1.1
htmltools 0.5.2
httr 1.4.2
ids 1.0.1
igraph 1.2.6
isoband 0.2.5
jquerylib 0.1.4
jsonlite 1.7.2
knitr 1.36
labeling 0.4.2
lambda.r 1.2.4
lattice 0.20-45
lifecycle 1.0.1
lubridate 1.7.10
magrittr 2.0.1
matrixStats 0.61.0
memoise 2.0.0
methods 4.1.1
mgcv 1.8-37
mime 0.12
modelr 0.1.8
munsell 0.5.0
nat.utils 0.5.1
nlme 3.1-153
openssl 1.4.5
optparse 1.6.6
org.testing.db 0.1
parallel 4.1.1
pillar 1.6.3
pkgconfig 2.0.3
pkgload 1.2.2
plogr 0.2.0
plyr 1.8.6
png 0.1-7
praise 1.0.0
prettyunits 1.1.1
processx 3.5.2
progress 1.2.2
ps 1.6.0
purrr 0.3.4
rappdirs 0.3.3
readr 2.0.2
readxl 1.3.1
rematch2 2.1.2
rematch 1.0.1
reprex 2.0.1
restfulr 0.0.13
rjson 0.2.20
rlang 0.4.11
rmarkdown 2.11
rprojroot 2.0.2
rstudioapi 0.13
rtracklayer 1.52.0
rvest 1.0.1
scales 1.1.1
selectr 0.4-2
snow 0.4-3
splines 4.1.1
stats4 4.1.1
stats 4.1.1
stringi 1.7.4
stringr 1.4.0
sys 3.4
tcltk 4.1.1
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.0.4
tibble 3.1.4
tibble 3.1.5
tidyr 1.1.4
tidyselect 1.1.1
tidyverse 1.3.1
tinytex 0.34
tools 4.1.1
translations 4.1.1
tzdb 0.1.2
utf8 1.2.2
utils 4.1.1
uuid 0.1-4
vctrs 0.3.8
viridisLite 0.4.0
vroom 1.5.5
waldo 0.3.1
withr 2.4.2
xfun 0.26
xml2 1.3.2
yaml 2.2.1
zlibbioc 1.38.0

python 2.7.15
python 3.9.7

Jinja2 2.11.3
MarkupSafe 2.0.1
Pillow 6.2.2
PySocks 1.7.1
PyWavelets 1.0.3
PyYAML 5.4.1
argparse 1.2.1
backports-abc 0.5
backports.functools-lru-cache 1.6.1
beautifulsoup4 4.10.0
brotlipy 0.7.0
certifi 2019.11.28
certifi 2021.5.30
cffi 1.14.6
chardet 4.0.0
charset-normalizer 2.0.6
cloudpickle 1.3.0
colorama 0.4.4
conda-build 3.21.5
conda-package-handling 1.7.3
conda 4.10.3
cryptography 3.4.7
cycler 0.10.0
decorator 4.4.2
filelock 3.1.0
flask 0.10.1
functools32 3.2.3.post2
futures 3.3.0
glob2 0.7
idna 3.2
intervaltree 3.1.0
kiwisolver 1.1.0
libarchive-c 3.1
matplotlib 2.2.5
mercurial 4.8.2
networkx 2.2
numpy 1.16.5
pandas 0.24.2
pip 20.3.4
pip 21.2.4
pkginfo 1.7.1
psutil 5.8.0
pyOpenSSL 20.0.1
pycosat 0.6.3
pycparser 2.20
pyparsing 2.4.7
pysam 0.17.0
python-dateutil 2.8.1
pytz 2020.1
pytz 2021.1
requests 2.26.0
ruamel-yaml-conda 0.15.100
scikit-image 0.14.5
scikit-learn 0.19.2
scipy 1.2.1
setuptools 44.0.0.post20200102
setuptools 58.0.4
singledispatch 0.0.0
six 1.16.0
sortedcontainers 2.4.0
soupsieve 2.2.1
subprocess32 3.5.4
tornado 5.1.1
tqdm 4.62.3
urllib3 1.26.7
wheel 0.37.0
wsgiref 0.1.2