Ecosyste.ms: Docker

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pipecraft/vsearch_dada2 : 3

Ubuntu Mantic Minotaur (development branch)

Latest release: about 1 year ago - 153 downloads - 785 dependencies

Dependencies

@PKGNAME@ @VERSION@
BH 1.81.0-1
Biobase 2.60.0
BiocGenerics 0.46.0
BiocManager 1.30.22
BiocParallel 1.34.2
BiocVersion 3.17.1
Biostrings 2.68.1
DT 0.29
DelayedArray 0.26.7
GenomeInfoDb 1.36.2
GenomeInfoDbData 1.2.10
GenomicAlignments 1.36.0
GenomicRanges 1.52.0
IRanges 2.34.1
KernSmooth 2.23-22
MASS 7.3-60
Matrix 1.6-1
MatrixGenerics 1.12.3
R.methodsS3 1.8.2
R.oo 1.25.0
R.utils 2.12.2
R6 2.5.1
RColorBrewer 1.1-3
RCurl 1.98-1.12
Rcpp 1.0.11
RcppArmadillo 0.12.6.3.0
RcppCCTZ 0.2.12
RcppDate 0.0.3
RcppEigen 0.3.3.9.3
RcppParallel 5.1.7
Rhtslib 2.2.0
Rsamtools 2.16.0
S4Arrays 1.0.5
S4Vectors 0.38.1
ShortRead 1.58.0
SummarizedExperiment 1.30.2
XVector 0.40.0
abind 1.4-5
ade4 1.7-22
askpass 1.1
assertthat 0.2.1
backports 1.4.1
base64enc 0.1-3
base 4.3.1
bit64 4.0.5
bit 4.0.5
bitops 1.0-7
boot 1.3-28.1
brew 1.0-8
brio 1.1.3
bslib 0.5.1
cachem 1.0.8
callr 3.7.3
class 7.3-22
cli 3.6.1
clipr 0.8.0
clisymbols 1.2.0
cluster 2.1.4
codetools 0.2-19
colorspace 2.1-0
commonmark 1.9.0
compiler 4.3.1
covr 3.6.2
cpp11 0.4.6
crayon 1.5.2
credentials 1.3.2
crosstalk 1.2.0
curl 5.0.2
cyclocomp 1.1.1
dada2 1.28.0
data.table 1.14.8
datasets 4.3.1
deldir 1.0-9
desc 1.4.2
devtools 2.4.5
diffobj 0.3.5
digest 0.6.33
downlit 0.4.3
dplyr 1.1.2
ellipsis 0.3.2
evaluate 0.21
fansi 1.0.4
farver 2.1.1
fastmap 1.1.1
foghorn 1.5.1
fontawesome 0.5.2
foreign 0.8-84
formatR 1.14
fs 1.6.3
futile.logger 1.4.3
futile.options 1.0.1
gargle 1.5.2
generics 0.1.3
gert 1.9.3
getopt 1.20.3
ggplot2 3.4.3
gh 1.4.0
gitcreds 0.1.2
glue 1.6.2
gmailr 2.0.0
grDevices 4.3.1
graphics 4.3.1
grid 4.3.1
gtable 0.3.4
highr 0.10
htmltools 0.5.6
htmlwidgets 1.6.2
httpuv 1.6.11
httr2 0.2.3
httr 1.4.7
hunspell 3.0.2
hwriter 1.3.2.1
ini 0.3.1
interp 1.1-4
isoband 0.2.7
jose 1.2.0
jpeg 0.1-10
jquerylib 0.1.4
jsonlite 1.8.7
knitr 1.43
labeling 0.4.3
lambda.r 1.2.4
later 1.3.1
lattice 0.21-8
latticeExtra 0.6-30
lazyeval 0.2.2
lifecycle 1.0.3
linkXTS 1.0
lintr 3.1.0
lulu 0.1.0
magrittr 2.0.3
matrixStats 1.0.0
memoise 2.0.1
methods 4.3.1
mgcv 1.9-0
mime 0.12
miniUI 0.1.1.1
mockery 0.4.3
munsell 0.5.0
nanotime 0.3.7
nlme 3.1-163
nnet 7.3-19
openssl 2.1.0
optparse 1.7.3
parallel 4.3.1
parsedate 1.3.1
pillar 1.9.0
pingr 2.0.2
pixmap 0.4-12
pkgbuild 1.4.2
pkgconfig 2.0.3
pkgdown 2.0.7
pkgload 1.3.2.1
plyr 1.8.8
png 0.1-8
praise 1.0.0
prettyunits 1.1.1
processx 3.8.2
profvis 0.3.8
promises 1.2.1
ps 1.7.5
purrr 1.0.2
ragg 1.2.5
rappdirs 0.3.3
rcmdcheck 1.4.0
rematch2 2.1.2
rematch 2.0.0
remotes 2.4.2.1
reshape2 1.4.4
rex 1.2.1
rhub 1.1.2
rlang 1.1.1
rmarkdown 2.24
roxygen2 7.2.3
rpart 4.1.19
rprojroot 2.0.3
rstudioapi 0.15.0
rversions 2.1.2
rvest 1.0.3
sass 0.4.7
scales 1.2.1
segmented 1.6-4
selectr 0.4-2
seqinr 4.2-30
sessioninfo 1.2.2
shiny 1.7.5
snow 0.4-4
sourcetools 0.1.7-1
sp 2.0-0
spatial 7.3-17
spelling 2.2.1
splines 4.3.1
stats4 4.3.1
stats 4.3.1
stringi 1.7.12
stringr 1.5.0
survival 3.5-7
sys 3.4.2
systemfonts 1.0.4
tcltk 4.3.1
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
testthat 3.1.10
textshaping 0.3.6
tibble 3.2.1
tidyselect 1.2.0
tinytex 0.46
tools 4.3.1
translations 4.3.1
urlchecker 1.0.1
usethis 2.2.2
utf8 1.2.3
utils 4.3.1
uuid 1.1-1
vctrs 0.6.3
viridisLite 0.4.2
waldo 0.5.1
whisker 0.4.1
whoami 1.3.0
withr 2.5.0
xfun 0.40
xml2 1.3.5
xmlparsedata 1.0.5
xopen 1.0.0
xtable 1.8-4
xts 0.13.1
yaml 2.3.7
zip 2.3.0
zlibbioc 1.46.0
zoo 1.8-12

bash 5.2.15