Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

nfcore/lncpipe : dev

A Docker image for nf-core/lncpipe

Latest release: about 6 years ago - 1,196 downloads - 413 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
AnnotationDbi 1.42.1
BH 1.66.0-1
Biobase 2.40.0
BiocGenerics 0.26.0
BiocParallel 1.14.2
DBI 1.0.0
DESeq2 1.20.0
DEoptimR 1.0-8
DT 0.4
DelayedArray 0.6.6
Formula 1.2-3
GenomeInfoDb 1.16.0
GenomeInfoDbData 1.1.0
GenomicRanges 1.32.7
Hmisc 4.1-1
IRanges 2.14.12
KernSmooth 2.23-15
LncPipeReporter 0.1.0
MASS 7.3-50
Matrix 1.2-14
NOISeq 2.24.0
R6 2.2.2
RColorBrewer 1.1-2
RCurl 1.95-4.11
RSQLite 2.1.1
Rcpp 1.0.0
RcppArmadillo 0.9.100.5.0
S4Vectors 0.18.3
SummarizedExperiment 1.10.1
TSP 1.1-6
XML 3.98-1.16
XVector 0.20.0
acepack 1.4.1
annotate 1.58.0
assertthat 0.2.0
backports 1.1.2
base64enc 0.1-3
base 3.5.1
bindr 0.1.1
bindrcpp 0.2.2
bit64 0.9-7
bit 1.1-12
bitops 1.0-6
blob 1.1.1
caTools 1.17.1.1
callr 3.0.0
checkmate 1.8.5
class 7.3-14
cli 1.0.0
clipr 0.4.1
clisymbols 1.2.0
cluster 2.0.7-1
codetools 0.2-15
colorspace 1.3-2
compiler 3.5.1
cowplot 0.9.3
crayon 1.3.4
crosstalk 1.0.0
curl 3.2
data.table 1.11.8
datasets 3.5.1
dendextend 1.8.0
desc 1.2.0
devtools 2.0.1
digest 0.6.18
diptest 0.75-7
dplyr 0.7.8
edgeR 3.22.5
evaluate 0.11
fansi 0.3.0
flexdashboard 0.5.1.1
flexmix 2.3-14
foreach 1.4.4
foreign 0.8-71
formatR 1.5
fpc 2.1-11.1
fs 1.2.6
futile.logger 1.4.3
futile.options 1.0.1
gclus 1.3.1
gdata 2.18.0
genefilter 1.62.0
geneplotter 1.58.0
ggbiplot 0.55
ggplot2 3.1.0
ggsci 2.9
gh 1.0.1
git2r 0.23.0
glue 1.3.0
gplots 3.0.1
grDevices 3.5.1
graphics 3.5.1
grid 3.5.1
gridBase 0.4-7
gridExtra 2.3
gtable 0.2.0
gtools 3.8.1
heatmaply 0.15.2
hexbin 1.27.2
highr 0.7
htmlTable 1.12
htmltools 0.3.6
htmlwidgets 1.2
httpuv 1.4.5
httr 1.3.1
ini 0.3.1
iterators 1.0.10
jsonlite 1.5
kernlab 0.9-27
knitr 1.20
labeling 0.3
lambda.r 1.2.3
later 0.7.3
lattice 0.20-35
latticeExtra 0.6-28
lazyeval 0.2.1
limma 3.36.5
locfit 1.5-9.1
magrittr 1.5
markdown 0.8
matrixStats 0.54.0
mclust 5.4.1
memoise 1.1.0
methods 3.5.1
mgcv 1.8-24
mime 0.5
modeltools 0.2-22
munsell 0.5.0
mvtnorm 1.0-8
mvtnormAPI 1.0-0
nlme 3.1-137
nnet 7.3-12
openssl 1.0.2
org.testing.db 0.1
parallel 3.5.1
pillar 1.3.0
pkgbuild 1.0.2
pkgconfig 2.0.2
pkgload 1.0.1
plogr 0.2.0
plotly 4.8.0
plyr 1.8.4
prabclus 2.2-6
prettyunits 1.0.2
processx 3.2.0
promises 1.0.1
ps 1.1.0
purrr 0.2.5
qap 0.1-1
rcmdcheck 1.3.0
registry 0.5
remotes 2.0.1
reshape2 1.4.3
rlang 0.3.0.1
rmarkdown 1.10
robustbase 0.93-2
rpart 4.1-13
rprojroot 1.3-2
rstudioapi 0.7
scales 1.0.0
seriation 1.2-3
sessioninfo 1.0.0
shiny 1.2.0
snow 0.4-3
sourcetools 0.1.7
splines 3.5.1
stats4 3.5.1
stats 3.5.1
stringi 1.2.4
stringr 1.3.1
survival 2.42-6
tcltk 3.5.1
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
tibble 1.4.2
tidyr 0.8.1
tidyselect 0.2.4
tinytex 0.8
tools 3.5.1
translations 3.5.1
trimcluster 0.1-2.1
usethis 1.4.0
utf8 1.1.4
utils 3.5.1
viridis 0.5.1
viridisLite 0.3.0
webshot 0.5.1
whisker 0.3-2
withr 2.1.2
xfun 0.3
xopen 1.0.0
xtable 1.8-3
yaml 2.2.0
zlibbioc 1.26.0

debian/adduser 3.115
debian/apt 1.4.8
debian/base-files 9.9 deb9u4
debian/base-passwd 3.5.43
debian/bash 4.4-5
debian/bsdutils 1:2.29.2-1 deb9u1
debian/bzip2 1.0.6-8.1
debian/ca-certificates 20161130 nmu1
debian/coreutils 8.26-3
debian/curl 7.52.1-5 deb9u6
debian/dash 0.5.8-2.4
debian/debconf 1.5.61
debian/debian-archive-keyring 2017.5
debian/debianutils 4.8.1.1
debian/diffutils 1:3.5-3
debian/dpkg 1.18.24
debian/e2fslibs 1.43.4-2
debian/e2fsprogs 1.43.4-2
debian/file 1:5.30-1 deb9u1
debian/findutils 4.6.0 git 20161106-2
debian/gcc-6-base 6.3.0-18 deb9u1
debian/git-man 1:2.11.0-3 deb9u3
debian/git 1:2.11.0-3 deb9u3
debian/gpgv 2.1.18-8~deb9u1
debian/grep 2.27-2
debian/gzip 1.6-5 b1
debian/hostname 3.18 b1
debian/init-system-helpers 1.48
debian/iproute2 4.9.0-1 deb9u1
debian/iputils-ping 3:20161105-1
debian/javascript-common 11
debian/krb5-locales 1.15-1 deb9u1
debian/less 481-2.1
debian/libacl1 2.2.52-3 b1
debian/libapr1 1.5.2-5
debian/libaprutil1 1.5.4-3
debian/libapt-pkg5.0 1.4.8
debian/libattr1 1:2.4.47-2 b2
debian/libaudit-common 1:2.6.7-2
debian/libaudit1 1:2.6.7-2
debian/libblkid1 2.29.2-1 deb9u1
debian/libbsd0 0.8.3-1
debian/libbz2-1.0 1.0.6-8.1
debian/libc-bin 2.24-11 deb9u3
debian/libc6 2.24-11 deb9u3
debian/libcap-ng0 0.7.7-3 b1
debian/libcap2 1:2.25-1
debian/libcomerr2 1.43.4-2
debian/libcurl3-gnutls 7.52.1-5 deb9u6
debian/libcurl3 7.52.1-5 deb9u6
debian/libdb5.3 5.3.28-12 deb9u1
debian/libdebconfclient0 0.227
debian/libedit2 3.1-20160903-3
debian/libelf1 0.168-1
debian/liberror-perl 0.17024-1
debian/libexpat1 2.2.0-2 deb9u1
debian/libfdisk1 2.29.2-1 deb9u1
debian/libffi6 3.2.1-6
debian/libgcc1 1:6.3.0-18 deb9u1
debian/libgcrypt20 1.7.6-2 deb9u2
debian/libgdbm3 1.8.3-14
debian/libglib2.0-0 2.50.3-2
debian/libglib2.0-data 2.50.3-2
debian/libgmp10 2:6.1.2 dfsg-1
debian/libgnutls30 3.5.8-5 deb9u3
debian/libgpg-error0 1.26-2
debian/libgpm2 1.20.4-6.2 b1
debian/libgssapi-krb5-2 1.15-1 deb9u1
debian/libhogweed4 3.3-1 b2
debian/libice6 2:1.0.9-2
debian/libicu57 57.1-6 deb9u2
debian/libidn11 1.33-1
debian/libidn2-0 0.16-1 deb9u1
debian/libjs-excanvas 0.r3-4
debian/libk5crypto3 1.15-1 deb9u1
debian/libkeyutils1 1.5.9-9
debian/libkrb5-3 1.15-1 deb9u1
debian/libkrb5support0 1.15-1 deb9u1
debian/libldap-2.4-2 2.4.44 dfsg-5 deb9u1
debian/libldap-common 2.4.44 dfsg-5 deb9u1
debian/liblz4-1 0.0~r131-2 b1
debian/liblzma5 5.2.2-1.2 b1
debian/libmagic-mgc 1:5.30-1 deb9u1
debian/libmagic1 1:5.30-1 deb9u1
debian/libmnl0 1.0.4-2
debian/libmount1 2.29.2-1 deb9u1
debian/libncurses5 6.0 20161126-1 deb9u2
debian/libncursesw5 6.0 20161126-1 deb9u2
debian/libnettle6 3.3-1 b2
debian/libnghttp2-14 1.18.1-1
debian/libp11-kit0 0.23.3-2
debian/libpam-modules-bin 1.1.8-3.6
debian/libpam-modules 1.1.8-3.6
debian/libpam-runtime 1.1.8-3.6
debian/libpam0g 1.1.8-3.6
debian/libpcre3 2:8.39-3
debian/libperl5.24 5.24.1-3 deb9u3
debian/libpopt0 1.16-10 b2
debian/libprocps6 2:3.3.12-3 deb9u1
debian/libpsl5 0.17.0-3
debian/libpython-stdlib 2.7.13-2
debian/libpython2.7-minimal 2.7.13-2 deb9u2
debian/libpython2.7-stdlib 2.7.13-2 deb9u2
debian/libreadline7 7.0-3
debian/librtmp1 2.4 20151223.gitfa8646d.1-1 b1
debian/libsasl2-2 2.1.27~101-g0780600 dfsg-3
debian/libsasl2-modules-db 2.1.27~101-g0780600 dfsg-3
debian/libsasl2-modules 2.1.27~101-g0780600 dfsg-3
debian/libselinux1 2.6-3 b3
debian/libsemanage-common 2.6-2
debian/libsemanage1 2.6-2
debian/libsepol1 2.6-2
debian/libserf-1-1 1.3.9-3
debian/libsm6 2:1.2.2-1 b3
debian/libsmartcols1 2.29.2-1 deb9u1
debian/libsqlite3-0 3.16.2-5 deb9u1
debian/libss2 1.43.4-2
debian/libssh2-1 1.7.0-1
debian/libssl1.0.2 1.0.2l-2 deb9u3
debian/libssl1.1 1.1.0f-3 deb9u2
debian/libstdc 6 6.3.0-18 deb9u1
debian/libsvn1 1.9.5-1 deb9u1
debian/libsystemd0 232-25 deb9u3
debian/libtasn1-6 4.10-1.1 deb9u1
debian/libtinfo5 6.0 20161126-1 deb9u2
debian/libudev1 232-25 deb9u3
debian/libunistring0 0.9.6 really0.9.3-0.1
debian/libustr-1.0-1 1.0.4-6
debian/libuuid1 2.29.2-1 deb9u1
debian/libx11-6 2:1.6.4-3
debian/libx11-data 2:1.6.4-3
debian/libxau6 1:1.0.8-1
debian/libxcb1 1.12-1
debian/libxdmcp6 1:1.1.2-3
debian/libxext6 2:1.3.3-1 b2
debian/libxml2 2.9.4 dfsg1-2.2 deb9u2
debian/libxmuu1 2:1.1.2-2
debian/libxrender1 1:0.9.10-1
debian/login 1:4.4-4.1
debian/lsb-base 9.20161125
debian/mawk 1.3.3-17 b3
debian/mercurial-common 4.0-1 deb9u1
debian/mercurial 4.0-1 deb9u1
debian/mime-support 3.60
debian/mount 2.29.2-1 deb9u1
debian/multiarch-support 2.24-11 deb9u3
debian/ncurses-base 6.0 20161126-1 deb9u2
debian/ncurses-bin 6.0 20161126-1 deb9u2
debian/netbase 5.4
debian/openssh-client 1:7.4p1-10 deb9u3
debian/openssl 1.1.0f-3 deb9u2
debian/passwd 1:4.4-4.1
debian/patch 2.7.5-1 b2
debian/perl-base 5.24.1-3 deb9u3
debian/perl-modules-5.24 5.24.1-3 deb9u3
debian/perl 5.24.1-3 deb9u3
debian/procps 2:3.3.12-3 deb9u1
debian/psmisc 22.21-2.1 b2
debian/publicsuffix 20180218.2049-0 deb9u1
debian/python-minimal 2.7.13-2
debian/python2.7-minimal 2.7.13-2 deb9u2
debian/python2.7 2.7.13-2 deb9u2
debian/python 2.7.13-2
debian/readline-common 7.0-3
debian/rename 0.20-4
debian/rsync 3.1.2-1 deb9u1
debian/sed 4.4-1
debian/sensible-utils 0.0.9 deb9u1
debian/sgml-base 1.29
debian/shared-mime-info 1.8-1
debian/subversion 1.9.5-1 deb9u1
debian/sysvinit-utils 2.88dsf-59.9
debian/tar 1.29b-1.1
debian/tini 0.18.0
debian/tzdata 2018d-0 deb9u1
debian/ucf 3.0036
debian/util-linux 2.29.2-1 deb9u1
debian/wget 1.18-5 deb9u2
debian/x11-common 1:7.7 19
debian/xauth 1:1.0.9-1 b2
debian/xdg-user-dirs 0.15-2 b1
debian/xml-core 0.17
debian/xz-utils 5.2.2-1.2 b1
debian/zlib1g 1:1.2.8.dfsg-5

openssl 1.0.2
openssl 1.1.1
python 2.7.15

casperjs 1.1.0-beta5

flask 0.10.1