nfcore/chipseq : dev
A docker image for nf-core/chipseq
Latest release: almost 5 years ago - 53,736 downloads - 309 dependencies
JSONDependencies
- BiocGenerics 0.34.0
- BiocManager 1.30.12
- BiocParallel 1.22.0
- DBI 1.1.1
- DESeq2 1.28.0
- DelayedArray 0.14.0
- GenomeInfoDb 1.24.0
- GenomeInfoDbData 1.2.4
- GenomicRanges 1.40.0
- IRanges 2.22.1
- MASS 7.3-53.1
- Matrix 1.3-2
- R6 2.5.0
- RColorBrewer 1.1-2
- RCurl 1.98-1.3
- RSQLite 2.2.5
- Rcpp 1.0.6
- @PKGNAME@ @VERSION@
- AnnotationDbi 1.50.0
- BH 1.75.0-0
- Biobase 2.48.0
- RcppArmadillo 0.10.4.0.0
- S4Vectors 0.26.0
- SummarizedExperiment 1.18.1
- UpSetR 1.4.0
- XML 3.99-0.6
- XVector 0.28.0
- affy 1.66.0
- affyio 1.58.0
- annotate 1.66.0
- assertthat 0.2.1
- backports 1.2.1
- base 4.0.2
- bit64 4.0.5
- bit 4.0.4
- bitops 1.0-7
- blob 1.2.1
- brio 1.1.2
- cachem 1.0.4
- callr 3.7.0
- cli 2.4.0
- colorspace 2.0-0
- compiler 4.0.2
- crayon 1.4.1
- datasets 4.0.2
- desc 1.3.0
- diffobj 0.3.3
- digest 0.6.27
- dplyr 1.0.5
- ellipsis 0.3.1
- evaluate 0.14
- fansi 0.4.2
- farver 2.1.0
- fastmap 1.1.0
- formatR 1.9
- futile.logger 1.4.3
- futile.options 1.0.1
- genefilter 1.70.0
- geneplotter 1.66.0
- generics 0.1.0
- getopt 1.20.3
- ggplot2 3.3.2
- glue 1.4.2
- grDevices 4.0.2
- graphics 4.0.2
- grid 4.0.2
- gridExtra 2.3
- gtable 0.3.0
- isoband 0.2.4
- jsonlite 1.7.2
- labeling 0.4.2
- lambda.r 1.2.4
- lattice 0.20-41
- lifecycle 1.0.0
- limma 3.44.1
- locfit 1.5-9.4
- magrittr 2.0.1
- matrixStats 0.58.0
- memoise 2.0.0
- methods 4.0.2
- mgcv 1.8-34
- munsell 0.5.0
- nlme 3.1-150
- optparse 1.6.6
- org.testing.db 0.1
- parallel 4.0.2
- pheatmap 1.0.12
- pillar 1.6.0
- pkgconfig 2.0.3
- pkgload 1.2.1
- plogr 0.2.0
- plyr 1.8.6
- praise 1.0.0
- preprocessCore 1.50.0
- processx 3.5.1
- ps 1.6.0
- purrr 0.3.4
- rematch2 2.1.2
- reshape2 1.4.4
- rlang 0.4.10
- rprojroot 2.0.2
- rstudioapi 0.13
- scales 1.1.1
- snow 0.4-3
- splines 4.0.2
- stats4 4.0.2
- stats 4.0.2
- stringi 1.5.3
- stringr 1.4.0
- survival 3.2-11
- tcltk 4.0.2
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.0.2
- tibble 3.1.1
- tidyr 1.1.0
- tidyselect 1.1.0
- tools 4.0.2
- translations 4.0.2
- utf8 1.2.1
- utils 4.0.2
- vctrs 0.3.7
- viridisLite 0.4.0
- vsn 3.56.0
- waldo 0.2.5
- withr 2.4.2
- xfun 0.16
- xtable 1.8-4
- zeallot 0.1.0
- zlibbioc 1.34.0
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- debian/ca-certificates 20190110
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- debian/debian-archive-keyring 2019.1
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