Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

nfcore/ampliseq : dev

A Docker image for nf-core/ampliseq.

Debian GNU/Linux 10 (buster)

Latest release: almost 4 years ago - 10,364 downloads - 331 dependencies

JSON

Dependencies

@PKGNAME@ @VERSION@
BH 1.69.0-1
Biobase 2.42.0
BiocGenerics 0.28.0
BiocParallel 1.16.6
Biostrings 2.50.2
DelayedArray 0.8.0
GenomeInfoDb 1.18.1
GenomeInfoDbData 1.2.1
GenomicAlignments 1.18.1
GenomicRanges 1.34.0
IRanges 2.16.0
MASS 7.3-51.4
Matrix 1.2-17
R6 2.4.0
RColorBrewer 1.1-2
RCurl 1.95-4.12
Rcpp 1.0.2
RcppParallel 4.4.4
Rsamtools 1.34.0
S4Vectors 0.20.1
ShortRead 1.40.0
SummarizedExperiment 1.12.0
XVector 0.22.0
assertthat 0.2.1
backports 1.1.5
base64enc 0.1-3
base 3.5.1
bitops 1.0-6
cli 1.1.0
cluster 2.1.0
colorspace 1.4-1
compiler 3.5.1
crayon 1.3.4
dada2 1.10.0
data.table 1.12.6
datasets 3.5.1
digest 0.6.22
ellipsis 0.3.0
evaluate 0.14
fansi 0.4.0
formatR 1.7
futile.logger 1.4.3
futile.options 1.0.1
getopt 1.20.3
ggplot2 3.2.1
glue 1.3.1
grDevices 3.5.1
graphics 3.5.1
grid 3.5.1
gtable 0.3.0
highr 0.8
htmltools 0.4.0
hwriter 1.3.2
jsonlite 1.6.1
knitr 1.28
labeling 0.3
lambda.r 1.2.4
lattice 0.20-38
latticeExtra 0.6-28
lazyeval 0.2.2
magrittr 1.5
markdown 1.1
matrixStats 0.55.0
methods 3.5.1
mgcv 1.8-29
mime 0.9
munsell 0.5.0
nlme 3.1-141
optparse 1.6.4
parallel 3.5.1
permute 0.9-5
pillar 1.4.2
pkgconfig 2.0.3
plyr 1.8.4
reshape2 1.4.3
rlang 0.4.1
rmarkdown 1.18
scales 1.0.0
snow 0.4-3
splines 3.5.1
stats4 3.5.1
stats 3.5.1
stringi 1.4.3
stringr 1.4.0
tcltk 3.5.1
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
tibble 2.1.3
tinytex 0.22
tools 3.5.1
translations 3.5.1
utf8 1.1.4
utils 3.5.1
vctrs 0.2.0
vegan 2.5-6
viridisLite 0.3.0
withr 2.1.2
xfun 0.13
yaml 2.2.1
zeallot 0.1.0
zlibbioc 1.28.0

debian/adduser 3.118
debian/apt 1.8.2
debian/base-files 10.3 deb10u3
debian/base-passwd 3.5.46
debian/bash 5.0-4
debian/bsdutils 1:2.33.1-0.1
debian/bzip2 1.0.6-9.2~deb10u1
debian/ca-certificates 20190110
debian/coreutils 8.30-3
debian/dash 0.5.10.2-5
debian/debconf 1.5.71
debian/debian-archive-keyring 2019.1
debian/debianutils 4.8.6.1
debian/diffutils 1:3.7-3
debian/dpkg 1.19.7
debian/e2fsprogs 1.44.5-1 deb10u3
debian/fdisk 2.33.1-0.1
debian/file 1:5.35-4 deb10u1
debian/findutils 4.6.0 git 20190209-2
debian/gcc-8-base 8.3.0-6
debian/git-man 1:2.20.1-2 deb10u1
debian/git 1:2.20.1-2 deb10u1
debian/gpgv 2.2.12-1 deb10u1
debian/grep 3.3-1
debian/gzip 1.9-3
debian/hostname 3.21
debian/init-system-helpers 1.56 nmu1
debian/krb5-locales 1.17-3
debian/less 487-0.1 b1
debian/libacl1 2.2.53-4
debian/libapr1 1.6.5-1 b1
debian/libaprutil1 1.6.1-4
debian/libapt-pkg5.0 1.8.2
debian/libattr1 1:2.4.48-4
debian/libaudit-common 1:2.8.4-3
debian/libaudit1 1:2.8.4-3
debian/libblkid1 2.33.1-0.1
debian/libbsd0 0.9.1-2
debian/libbz2-1.0 1.0.6-9.2~deb10u1
debian/libc-bin 2.28-10
debian/libc6 2.28-10
debian/libcap-ng0 0.7.9-2
debian/libcom-err2 1.44.5-1 deb10u3
debian/libcurl3-gnutls 7.64.0-4 deb10u1
debian/libdb5.3 5.3.28 dfsg1-0.5
debian/libdebconfclient0 0.249
debian/libedit2 3.1-20181209-1
debian/liberror-perl 0.17027-2
debian/libexpat1 2.2.6-2 deb10u1
debian/libext2fs2 1.44.5-1 deb10u3
debian/libfdisk1 2.33.1-0.1
debian/libffi6 3.2.1-9
debian/libgcc1 1:8.3.0-6
debian/libgcrypt20 1.8.4-5
debian/libgdbm-compat4 1.18.1-4
debian/libgdbm6 1.18.1-4
debian/libglib2.0-0 2.58.3-2 deb10u2
debian/libglib2.0-data 2.58.3-2 deb10u2
debian/libgmp10 2:6.1.2 dfsg-4
debian/libgnutls30 3.6.7-4 deb10u2
debian/libgpg-error0 1.35-1
debian/libgpm2 1.20.7-5
debian/libgssapi-krb5-2 1.17-3
debian/libhogweed4 3.4.1-1
debian/libice6 2:1.0.9-2
debian/libicu63 63.1-6
debian/libidn2-0 2.0.5-1 deb10u1
debian/libk5crypto3 1.17-3
debian/libkeyutils1 1.6-6
debian/libkrb5-3 1.17-3
debian/libkrb5support0 1.17-3
debian/libldap-2.4-2 2.4.47 dfsg-3 deb10u1
debian/libldap-common 2.4.47 dfsg-3 deb10u1
debian/liblz4-1 1.8.3-1
debian/liblzma5 5.2.4-1
debian/libmagic-mgc 1:5.35-4 deb10u1
debian/libmagic1 1:5.35-4 deb10u1
debian/libmount1 2.33.1-0.1
debian/libncurses6 6.1 20181013-2 deb10u2
debian/libncursesw6 6.1 20181013-2 deb10u2
debian/libnettle6 3.4.1-1
debian/libnghttp2-14 1.36.0-2 deb10u1
debian/libp11-kit0 0.23.15-2
debian/libpam-modules-bin 1.3.1-5
debian/libpam-modules 1.3.1-5
debian/libpam-runtime 1.3.1-5
debian/libpam0g 1.3.1-5
debian/libpcre2-8-0 10.32-5
debian/libpcre3 2:8.39-12
debian/libperl5.28 5.28.1-6
debian/libprocps7 2:3.3.15-2
debian/libpsl5 0.20.2-2
debian/libpython-stdlib 2.7.16-1
debian/libpython2-stdlib 2.7.16-1
debian/libpython2.7-minimal 2.7.16-2 deb10u1
debian/libpython2.7-stdlib 2.7.16-2 deb10u1
debian/libreadline7 7.0-5
debian/librtmp1 2.4 20151223.gitfa8646d.1-2
debian/libsasl2-2 2.1.27 dfsg-1 deb10u1
debian/libsasl2-modules-db 2.1.27 dfsg-1 deb10u1
debian/libsasl2-modules 2.1.27 dfsg-1 deb10u1
debian/libseccomp2 2.3.3-4
debian/libselinux1 2.8-1 b1
debian/libsemanage-common 2.8-2
debian/libsemanage1 2.8-2
debian/libsepol1 2.8-1
debian/libserf-1-1 1.3.9-7 b10
debian/libsm6 2:1.2.3-1
debian/libsmartcols1 2.33.1-0.1
debian/libsqlite3-0 3.27.2-3
debian/libss2 1.44.5-1 deb10u3
debian/libssh2-1 1.8.0-2.1
debian/libssl1.1 1.1.1d-0 deb10u2
debian/libstdc 6 8.3.0-6
debian/libsvn1 1.10.4-1 deb10u1
debian/libsystemd0 241-7~deb10u3
debian/libtasn1-6 4.13-3
debian/libtinfo6 6.1 20181013-2 deb10u2
debian/libudev1 241-7~deb10u3
debian/libunistring2 0.9.10-1
debian/libutf8proc2 2.3.0-1
debian/libuuid1 2.33.1-0.1
debian/libx11-6 2:1.6.7-1
debian/libx11-data 2:1.6.7-1
debian/libxau6 1:1.0.8-1 b2
debian/libxcb1 1.13.1-2
debian/libxdmcp6 1:1.1.2-3
debian/libxext6 2:1.3.3-1 b2
debian/libxml2 2.9.4 dfsg1-7 b3
debian/libxmuu1 2:1.1.2-2 b3
debian/libxrender1 1:0.9.10-1
debian/libzstd1 1.3.8 dfsg-3
debian/login 1:4.5-1.1
debian/lsb-base 10.2019051400
debian/mawk 1.3.3-17 b3
debian/mercurial-common 4.8.2-1 deb10u1
debian/mercurial 4.8.2-1 deb10u1
debian/mime-support 3.62
debian/mount 2.33.1-0.1
debian/ncurses-base 6.1 20181013-2 deb10u2
debian/ncurses-bin 6.1 20181013-2 deb10u2
debian/netbase 5.6
debian/openssh-client 1:7.9p1-10 deb10u2
debian/openssl 1.1.1d-0 deb10u2
debian/passwd 1:4.5-1.1
debian/patch 2.7.6-3 deb10u1
debian/perl-base 5.28.1-6
debian/perl-modules-5.28 5.28.1-6
debian/perl 5.28.1-6
debian/procps 2:3.3.15-2
debian/psmisc 23.2-1
debian/publicsuffix 20190415.1030-1
debian/python-minimal 2.7.16-1
debian/python2-minimal 2.7.16-1
debian/python2.7-minimal 2.7.16-2 deb10u1
debian/python2.7 2.7.16-2 deb10u1
debian/python2 2.7.16-1
debian/python 2.7.16-1
debian/readline-common 7.0-5
debian/sed 4.7-1
debian/sensible-utils 0.0.12
debian/shared-mime-info 1.10-1
debian/subversion 1.10.4-1 deb10u1
debian/sysvinit-utils 2.93-8
debian/tar 1.30 dfsg-6
debian/tzdata 2019c-0 deb10u1
debian/ucf 3.0038 nmu1
debian/util-linux 2.33.1-0.1
debian/wget 1.20.1-1.1
debian/x11-common 1:7.7 19
debian/xauth 1:1.0.10-1
debian/xdg-user-dirs 0.17-2
debian/xz-utils 5.2.4-1
debian/zlib1g 1:1.2.11.dfsg-1

java 11.0.1-internal 0-adhoc..src
python 3.6.7
python 3.7.6

edirect (devel)
github.com/fatih/color v1.9.0
github.com/fiam/gounidecode v0.0.0-20150629112515-8deddbd03fec
github.com/gedex/inflector v0.0.0-20170307190818-16278e9db813
github.com/klauspost/cpuid v1.3.1
github.com/mattn/go-colorable v0.1.4
github.com/mattn/go-isatty v0.0.11
github.com/pbnjay/memory v0.0.0-20190104145345-974d429e7ae4
github.com/stretchr/testify v1.6.1
github.com/surge/glog v0.0.0-20141108051140-2578deb2b95c
github.com/surgebase/porter2 v0.0.0-20150829210152-56e4718818e8
golang.org/x/sys v0.0.0-20191026070338-33540a1f6037
golang.org/x/text v0.3.3
stdlib 1.14.3

cisd-jhdf5:cisd-jhdf5 *
commons-beanutils:commons-beanutils 1.8.3
commons-collections:commons-collections 3.2.1
commons-io:commons-io 1.4
commons-lang:commons-lang 2.4
commons-lang:commons-lang 2.6
commons-logging:commons-logging 1.1.1
jbzip2:jbzip2 0.9
jrt-fs:jrt-fs 11.0.1-internal
net.sf.ezmorph:ezmorph 1.0.6
sam:sam 1.103
seppJsonMerger:seppJsonMerger *

jquery-ui 1.12.1

q2-alignment 2019.10.0
q2-composition 2019.10.0
q2-cutadapt 2019.10.0
q2-dada2 2019.10.0
q2-deblur 2019.10.0
q2-demux 2019.10.0
q2-diversity 2019.10.0
q2-emperor 2019.10.0
q2-feature-classifier 2019.10.0
q2-feature-table 2019.10.0
q2-fragment-insertion 2019.10.0
q2-gneiss 2019.10.0
q2-longitudinal 2019.10.0
q2-metadata 2019.10.0
q2-phylogeny 2019.10.0
q2-quality-control 2019.10.0
q2-quality-filter 2019.10.0
q2-sample-classifier 2019.10.0
q2-taxa 2019.10.0
q2-types 2019.10.0
q2-vsearch 2019.10.0
q2cli 2019.10.0