galclbl/epityping : latest
A repository for the epityping tool container
Latest release: over 2 years ago - 115 downloads - 123 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- BH 1.78.0-0
- Biobase 2.58.0
- BiocGenerics 0.44.0
- BiocManager 1.30.19
- BiocParallel 1.32.4
- BiocVersion 3.16.0
- Biostrings 2.66.0
- DelayedArray 0.24.0
- GenomeInfoDb 1.34.4
- GenomeInfoDbData 1.2.9
- GenomicAlignments 1.34.0
- GenomicRanges 1.50.1
- IRanges 2.32.0
- KernSmooth 2.23-20
- MASS 7.3-58.1
- Matrix 1.5-1
- MatrixGenerics 1.10.0
- R6 2.5.1
- RColorBrewer 1.1-3
- RCurl 1.98-1.9
- Rcpp 1.0.9
- Rhtslib 2.0.0
- Rsamtools 2.14.0
- S4Vectors 0.36.0
- SummarizedExperiment 1.28.0
- XVector 0.38.0
- XenofilteR 1.6
- base 4.2.2
- bitops 1.0-7
- boot 1.3-28.1
- class 7.3-20
- cli 3.4.1
- cluster 2.1.4
- codetools 0.2-18
- colorspace 2.0-3
- compiler 4.2.2
- cpp11 0.4.3
- crayon 1.5.2
- datasets 4.2.2
- dplyr 1.0.10
- fansi 1.0.3
- farver 2.1.1
- foreign 0.8-83
- formatR 1.12
- futile.logger 1.4.3
- futile.options 1.0.1
- generics 0.1.3
- ggplot2 3.4.0
- glue 1.6.2
- grDevices 4.2.2
- graphics 4.2.2
- grid 4.2.2
- gtable 0.3.1
- isoband 0.2.6
- labeling 0.4.2
- lambda.r 1.2.4
- lattice 0.20-45
- lifecycle 1.0.3
- magrittr 2.0.3
- matrixStats 0.63.0
- methods 4.2.2
- mgcv 1.8-41
- munsell 0.5.0
- nlme 3.1-160
- nnet 7.3-18
- parallel 4.2.2
- pillar 1.8.1
- pkgconfig 2.0.3
- plyr 1.8.8
- reshape2 1.4.4
- rlang 1.0.6
- rpart 4.1.19
- scales 1.2.1
- snow 0.4-4
- spatial 7.3-15
- splines 4.2.2
- stats4 4.2.2
- stats 4.2.2
- stringi 1.7.8
- stringr 1.5.0
- survival 3.4-0
- tcltk 4.2.2
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tibble 3.1.8
- tidyselect 1.2.0
- tools 4.2.2
- translations 4.2.2
- utf8 1.2.2
- utils 4.2.2
- vctrs 0.5.1
- viridisLite 0.4.1
- withr 2.5.0
- zlibbioc 1.44.0
- com.google.guava:guava 15.0
- commons-io:commons-io 2.4
- commons-lang:commons-lang 2.6
- commons-logging:commons-logging 1.1.1
- jrt-fs:jrt-fs 11.0.17
- net.sf.jopt-simple:jopt-simple 5.0.3
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.apache.commons:commons-collections4 4.3
- org.apache.commons:commons-compress 1.19
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.4
- org.apache.commons:commons-math3 3.5
- org.apache.logging.log4j:log4j-api 2.17.1
- org.apache.logging.log4j:log4j-core 2.17.1
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.sharegov:mjson 1.4.1
- org.usadellab.trimmomatic.Trimmomatic:trimmomatic 0.39
- picard:picard 2.27.5
- pip 22.3
- setuptools 65.5.0
- wheel 0.38.4