Ecosyste.ms: Docker
An open API service providing dependency metadata for docker images.
yiluxiangbei/pumpkin-gatk : 1.0
Latest release: about 3 years ago - 9 downloads - 587 dependencies
JSONDependencies
- KernSmooth 2.23-18
- MASS 7.3-54
- Matrix 1.3-3
- R6 2.5.0
- RColorBrewer 1.1-2
- Rcpp 1.0.6
- assertthat 0.2.1
- backports 1.1.10
- base 3.6.2
- bitops 1.0-7
- brio 1.1.2
- caTools 1.18.2
- callr 3.7.0
- cli 2.5.0
- colorspace 2.0-1
- compiler 3.6.2
- crayon 1.4.1
- data.table 1.12.8
- datasets 3.6.2
- desc 1.3.0
- diffobj 0.3.4
- digest 0.6.27
- dplyr 0.8.5
- ellipsis 0.3.2
- evaluate 0.14
- fansi 0.4.2
- farver 2.1.0
- gdata 2.18.0
- getopt 1.20.3
- ggplot2 3.3.0
- glue 1.4.2
- gplots 3.0.3
- grDevices 3.6.2
- graphics 3.6.2
- grid 3.6.2
- gsalib 2.1
- gtable 0.3.0
- gtools 3.8.2
- isoband 0.2.4
- jsonlite 1.7.2
- labeling 0.4.2
- lattice 0.20-44
- lifecycle 1.0.0
- magrittr 2.0.1
- methods 3.6.2
- mgcv 1.8-35
- munsell 0.5.0
- nlme 3.1-150
- optparse 1.6.4
- parallel 3.6.2
- pillar 1.6.1
- pkgconfig 2.0.3
- pkgload 1.2.1
- plogr 0.2.0
- praise 1.0.0
- processx 3.5.2
- ps 1.6.0
- purrr 0.3.4
- rematch2 2.1.2
- rlang 0.4.11
- rprojroot 2.0.2
- rstudioapi 0.13
- scales 1.1.1
- splines 3.6.2
- stats4 3.6.2
- stats 3.6.2
- tcltk 3.6.2
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.0.2
- tibble 3.1.2
- tidyselect 1.1.1
- tools 3.6.2
- translations 3.6.2
- utf8 1.2.1
- utils 3.6.2
- vctrs 0.3.8
- viridisLite 0.4.0
- waldo 0.2.5
- withr 2.4.2
- anthoscli (devel)
- cloud.google.com/go v0.47.0
- github.com/BurntSushi/toml v0.3.1
- github.com/Masterminds/semver v1.4.2
- github.com/Masterminds/sprig v2.14.1 incompatible
- github.com/PuerkitoBio/purell v1.1.1
- github.com/PuerkitoBio/urlesc v0.0.0-20170810143723-de5bf2ad4578
- github.com/aokoli/goutils v1.0.1
- github.com/cpuguy83/go-md2man/v2 v2.0.0
- github.com/cyphar/filepath-securejoin v0.2.2
- github.com/davecgh/go-spew v1.1.1
- github.com/docker/distribution v2.7.1 incompatible
- github.com/dsnet/compress v0.0.1
- github.com/evanphx/json-patch v4.5.0 incompatible
- github.com/fsnotify/fsnotify v1.4.7
- github.com/ghodss/yaml v1.0.0
- github.com/go-errors/errors v1.0.1
- github.com/go-openapi/jsonpointer v0.19.3
- github.com/go-openapi/jsonreference v0.19.3
- github.com/go-openapi/spec v0.19.5
- github.com/go-openapi/swag v0.19.5
- github.com/gobwas/glob v0.2.3
- github.com/gogo/protobuf v1.3.0
- github.com/golang/protobuf v1.3.2
- github.com/golang/snappy v0.0.1
- github.com/google/go-cmp v0.3.1
- github.com/google/gofuzz v1.0.0
- github.com/googleapis/gax-go/v2 v2.0.5
- github.com/googleapis/gnostic v0.3.1
- github.com/hashicorp/errwrap v1.0.0
- github.com/hashicorp/go-multierror v1.0.0
- github.com/hashicorp/go-version v1.2.0
- github.com/hashicorp/golang-lru v0.5.1
- github.com/huandu/xstrings v1.2.0
- github.com/imdario/mergo v0.3.7
- github.com/json-iterator/go v1.1.7
- github.com/kr/pretty v0.1.0
- github.com/kr/text v0.1.0
- github.com/kylelemons/godebug v1.1.0
- github.com/mailru/easyjson v0.7.0
- github.com/mattn/go-runewidth v0.0.7
- github.com/mholt/archiver v3.1.1 incompatible
- github.com/modern-go/concurrent v0.0.0-20180306012644-bacd9c7ef1dd
- github.com/modern-go/reflect2 v1.0.1
- github.com/natefinch/lumberjack v2.0.0 incompatible
- github.com/nwaples/rardecode v1.0.0
- github.com/olekukonko/tablewriter v0.0.4
- github.com/opencontainers/go-digest v1.0.0-rc1
- github.com/pierrec/lz4 v2.2.5 incompatible
- github.com/pkg/errors v0.8.1
- github.com/posener/complete/v2 v2.0.1-alpha.12
- github.com/posener/script v1.0.4
- github.com/russross/blackfriday/v2 v2.0.1
- github.com/satori/go.uuid v1.2.0
- github.com/shurcooL/sanitized_anchor_name v1.0.0
- github.com/spf13/cobra v0.0.5
- github.com/spf13/pflag v1.0.5
- github.com/ulikunitz/xz v0.5.6
- github.com/xi2/xz v0.0.0-20171230120015-48954b6210f8
- github.com/xlab/treeprint v0.0.0-20181112141820-a009c3971eca
- go.opencensus.io v0.22.0
- go.uber.org/atomic v1.4.0
- go.uber.org/multierr v1.1.0
- go.uber.org/zap v1.10.0
- golang.org/x/crypto v0.0.0-20190621222207-cc06ce4a13d4
- golang.org/x/net v0.0.0-20191004110552-13f9640d40b9
- golang.org/x/oauth2 v0.0.0-20190604053449-0f29369cfe45
- golang.org/x/sys v0.0.0-20190801041406-cbf593c0f2f3
- golang.org/x/text v0.3.2
- golang.org/x/time v0.0.0-20190308202827-9d24e82272b4
- golang.org/x/xerrors v0.0.0-20190717185122-a985d3407aa7
- google.golang.org/api v0.9.0
- google.golang.org/genproto v0.0.0-20191009194640-548a555dbc03
- google.golang.org/grpc v1.24.0
- gopkg.in/inf.v0 v0.9.1
- gopkg.in/yaml.v2 v2.2.4
- gopkg.in/yaml.v3 v3.0.0-20191026110619-0b21df46bc1d
- istio.io/pkg v0.0.0-20191030005435-10d06b6b315e
- k8s.io/api v0.0.0-20190620084959-7cf5895f2711
- k8s.io/apiextensions-apiserver v0.0.0-20190620085554-14e95df34f1f
- k8s.io/apimachinery v0.0.0-20190612205821-1799e75a0719
- k8s.io/client-go v0.0.0-20190620085101-78d2af792bab
- k8s.io/helm v2.14.3 incompatible
- k8s.io/klog v1.0.0
- k8s.io/kube-openapi v0.0.0-20190918143330-0270cf2f1c1d
- k8s.io/kubectl v0.0.0-20191003004222-1f3c0cd90ca9
- k8s.io/utils v0.0.0-20190801114015-581e00157fb1
- sigs.k8s.io/controller-runtime v0.2.2
- sigs.k8s.io/kustomize/kyaml v0.0.5
- sigs.k8s.io/yaml v1.1.0
- stdlib 1.13.7
- US_export_policy:US_export_policy *
- args4j:args4j 2.33
- charsets:charsets *
- cldrdata:cldrdata *
- com.carrotsearch:hppc 0.7.2
- com.clearspring.analytics:stream 2.7.0
- com.esotericsoftware:kryo-shaded 4.0.2
- com.esotericsoftware:kryo 4.0.0
- com.esotericsoftware:minlog 1.3.0
- com.esotericsoftware:reflectasm 1.10.0
- com.esotericsoftware:reflectasm 1.11.3
- com.fasterxml.jackson.core:jackson-annotations 2.9.8
- com.fasterxml.jackson.core:jackson-core 2.9.9
- com.fasterxml.jackson.core:jackson-databind 2.9.8
- com.fasterxml.jackson.jaxrs:jackson-jaxrs-base 2.9.8
- com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider 2.9.8
- com.fasterxml.jackson.module:jackson-module-jaxb-annotations 2.9.8
- com.fasterxml.jackson.module:jackson-module-paranamer 2.9.8
- com.fasterxml.woodstox:woodstox-core 5.0.3
- com.github.fommil.netlib:core 1.1
- com.github.fommil.netlib:core 1.1.2
- com.github.fommil.netlib:native_ref-java 1.1
- com.github.fommil.netlib:native_system-java 1.1
- com.github.fommil.netlib:netlib-native_ref-linux-x86_64 1.1
- com.github.fommil.netlib:netlib-native_ref-osx-x86_64 1.1
- com.github.fommil.netlib:netlib-native_system-linux-x86_64 1.1
- com.github.fommil.netlib:netlib-native_system-osx-x86_64 1.1
- com.github.fommil:jniloader 1.1
- com.github.jsr203hadoop:jsr203hadoop 1.0.3
- com.github.rwl:jtransforms 2.4.0
- com.github.stephenc.jcip:jcip-annotations 1.0-1
- com.google.android:annotations 4.1.1.4
- com.google.api-client:google-api-client 1.30.10
- com.google.api.grpc:grpc-google-cloud-bigquerystorage-v1 1.5.1
- com.google.api.grpc:grpc-google-cloud-bigquerystorage-v1beta1 0.105.1
- com.google.api.grpc:grpc-google-cloud-bigquerystorage-v1beta2 0.105.1
- com.google.api.grpc:proto-google-cloud-bigquerystorage-v1 1.5.1
- com.google.api.grpc:proto-google-cloud-bigquerystorage-v1alpha2 0.105.1
- com.google.api.grpc:proto-google-cloud-bigquerystorage-v1beta1 0.105.1
- com.google.api.grpc:proto-google-cloud-bigquerystorage-v1beta2 0.105.1
- com.google.api.grpc:proto-google-common-protos 1.18.0
- com.google.apis:google-api-services-bigquery v2-rev20200818-1.30.10
- com.google.apis:google-api-services-storage v1-rev135-1.24.1
- com.google.apis:google-api-services-storage v1-rev20190910-1.30.3
- com.google.auth:google-auth-library-credentials 0.18.0
- com.google.auth:google-auth-library-oauth2-http 0.18.0
- com.google.auto.value:auto-value-annotations 1.6.6
- com.google.cloud.bigdataoss:gcs-connector 1.9.4-hadoop3
- com.google.cloud.bigdataoss:gcsio 1.9.4
- com.google.cloud.bigdataoss:util-hadoop 1.9.4-hadoop3
- com.google.cloud.bigdataoss:util 1.9.4
- com.google.cloud:google-cloud-bigquery 1.117.1
- com.google.cloud:google-cloud-bigquerystorage 1.5.1
- com.google.cloud:google-cloud-core-http 1.91.3
- com.google.cloud:google-cloud-core 1.91.3
- com.google.cloud:google-cloud-nio 0.117.0-alpha
- com.google.cloud:google-cloud-storage 1.99.0
- com.google.code.findbugs:jsr305 3.0.2
- com.google.code.gson:gson 2.8.6
- com.google.errorprone:error_prone_annotations 2.3.3
- com.google.guava:failureaccess 1.0.1
- com.google.guava:guava 27.1-jre
- com.google.guava:listenablefuture 9999.0-empty-to-avoid-conflict-with-guava
- com.google.http-client:google-http-client-appengine 1.32.1
- com.google.http-client:google-http-client-jackson2 1.36.0
- com.google.http-client:google-http-client 1.36.0
- com.google.j2objc:j2objc-annotations 1.3
- com.google.oauth-client:google-oauth-client 1.31.0
- com.google.protobuf:protobuf-java-util 3.10.0
- com.google.protobuf:protobuf-java 3.10.0
- com.google.re2j:re2j 1.1
- com.googlecode.json-simple:json-simple 1.1.1
- com.googlecode.protobuf-java-format:protobuf-java-format 1.2
- com.nimbusds:nimbus-jose-jwt 4.41.1
- com.ning:compress-lzf 1.0.3
- com.opencsv:opencsv 3.4
- com.squareup.okhttp:okhttp 2.7.5
- com.squareup.okio:okio 1.6.0
- com.sun.jersey.contribs:jersey-guice 1.19
- com.sun.jersey:jersey-client 1.19
- com.sun.jersey:jersey-core 1.19
- com.sun.jersey:jersey-json 1.19
- com.sun.jersey:jersey-server 1.19
- com.sun.jersey:jersey-servlet 1.19
- com.sun:jce 1.8.0_242
- com.sun:sunec 1.8.0_242
- com.sun:sunjce_provider 1.8.0_242
- com.sun:sunpkcs11 1.8.0_242
- com.thoughtworks.paranamer:paranamer 2.8
- com.univocity:univocity-parsers 2.7.3
- com.vlkan:flatbuffers 1.2.0-3f79e055
- commons-beanutils:commons-beanutils 1.9.3
- commons-cli:commons-cli 1.2
- commons-codec:commons-codec 1.11
- commons-collections:commons-collections 3.2.2
- commons-io:commons-io 2.6
- commons-lang:commons-lang 2.6
- commons-logging:commons-logging 1.2
- commons-net:commons-net 3.6
- commons-pool:commons-pool 1.6
- de.javakaffee:kryo-serializers 0.42
- dnsjava:dnsjava 2.1.7
- dnsns:dnsns *
- dt:dt *
- gov.nist.math.jama:gov.nist.math.jama 1.1.1
- icedtea-sound:icedtea-sound *
- io.airlift:aircompressor 0.10
- io.dropwizard.metrics:metrics-core 3.1.5
- io.dropwizard.metrics:metrics-graphite 3.1.5
- io.dropwizard.metrics:metrics-json 3.1.5
- io.dropwizard.metrics:metrics-jvm 3.1.5
- io.netty:netty-all 4.1.42.Final
- io.netty:netty-buffer 4.1.48.Final
- io.netty:netty-codec-http2 4.1.48.Final
- io.netty:netty-codec-http 4.1.48.Final
- io.netty:netty-codec-socks 4.1.48.Final
- io.netty:netty-codec 4.1.48.Final
- io.netty:netty-common 4.1.48.Final
- io.netty:netty-handler-proxy 4.1.48.Final
- io.netty:netty-handler 4.1.48.Final
- io.netty:netty-resolver 4.1.48.Final
- io.netty:netty-tcnative-boringssl-static 2.0.30.Final
- io.netty:netty-transport-native-epoll 4.1.48.Final
- io.netty:netty-transport-native-unix-common 4.1.48.Final
- io.netty:netty-transport 4.1.48.Final
- io.netty:netty 3.10.6.Final
- jaccess:jaccess *
- jarhdf5:jarhdf5 2.11.0
- javax.annotation:javax.annotation-api 1.3.2
- javax.servlet:javax.servlet-api 3.1.0
- javax.validation:validation-api 1.1.0.Final
- javax.ws.rs:javax.ws.rs-api 2.0.1
- javax.ws.rs:jsr311-api 1.1.1
- javax.xml.bind:jaxb-api 2.2.11
- jconsole:jconsole *
- jline:jline 0.9.94
- joda-time:joda-time 2.9.9
- jsse:jsse 1.8.0_242
- local_policy:local_policy *
- localedata:localedata *
- log4j:log4j 1.2.17
- management-agent:management-agent *
- nashorn:nashorn 1.8.0_242-8u242-b08-0ubuntu3~18.04-b08
- net.grey-panther:natural-comparator 1.1
- net.minidev:accessors-smart 1.2
- net.minidev:json-smart 2.3
- net.razorvine:pyrolite 4.13
- net.sf.jopt-simple:jopt-simple 5.0.3
- net.sf.opencsv:opencsv 2.3
- net.sf.py4j:py4j 0.10.7
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.aeonbits.owner:owner 1.0.9
- org.antlr:antlr4-runtime 4.7
- org.apache.arrow:arrow-format 0.10.0
- org.apache.arrow:arrow-memory 0.10.0
- org.apache.arrow:arrow-vector 0.10.0
- org.apache.avro:avro-guava-dependencies 1.8.2
- org.apache.avro:avro-ipc 1.8.2
- org.apache.avro:avro-mapred 1.8.2
- org.apache.avro:avro 1.8.2
- org.apache.commons:commons-collections4 4.3
- org.apache.commons:commons-compress 1.19
- org.apache.commons:commons-configuration2 2.4
- org.apache.commons:commons-crypto 1.0.0
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.8.1
- org.apache.commons:commons-math3 3.5
- org.apache.commons:commons-text 1.6
- org.apache.commons:commons-vfs2 2.0
- org.apache.curator:curator-client 2.13.0
- org.apache.curator:curator-framework 2.13.0
- org.apache.curator:curator-recipes 2.13.0
- org.apache.hadoop:hadoop-annotations 3.2.1
- org.apache.hadoop:hadoop-auth 3.2.1
- org.apache.hadoop:hadoop-client 3.2.1
- org.apache.hadoop:hadoop-common 3.2.1
- org.apache.hadoop:hadoop-hdfs-client 3.2.1
- org.apache.hadoop:hadoop-mapreduce-client-common 3.2.1
- org.apache.hadoop:hadoop-mapreduce-client-core 3.2.1
- org.apache.hadoop:hadoop-mapreduce-client-jobclient 3.2.1
- org.apache.hadoop:hadoop-yarn-api 3.2.1
- org.apache.hadoop:hadoop-yarn-client 3.2.1
- org.apache.hadoop:hadoop-yarn-common 3.2.1
- org.apache.hive:hive-storage-api 2.6.0
- org.apache.htrace:htrace-core4 4.1.0-incubating
- org.apache.httpcomponents:httpclient 4.5.10
- org.apache.httpcomponents:httpcore 4.4.12
- org.apache.kerby:kerb-admin 1.0.1
- org.apache.kerby:kerb-client 1.0.1
- org.apache.kerby:kerb-common 1.0.1
- org.apache.kerby:kerb-core 1.0.1
- org.apache.kerby:kerb-crypto 1.0.1
- org.apache.kerby:kerb-identity 1.0.1
- org.apache.kerby:kerb-server 1.0.1
- org.apache.kerby:kerb-simplekdc 1.0.1
- org.apache.kerby:kerb-util 1.0.1
- org.apache.kerby:kerby-asn1 1.0.1
- org.apache.kerby:kerby-config 1.0.1
- org.apache.kerby:kerby-pkix 1.0.1
- org.apache.kerby:kerby-util 1.0.1
- org.apache.kerby:kerby-xdr 1.0.1
- org.apache.kerby:token-provider 1.0.1
- org.apache.logging.log4j:log4j-api 2.13.2
- org.apache.logging.log4j:log4j-core 2.13.2
- org.apache.logging.log4j:log4j-jcl 2.13.1
- org.apache.maven.scm:maven-scm-api 1.4
- org.apache.maven.scm:maven-scm-provider-svn-commons 1.4
- org.apache.maven.scm:maven-scm-provider-svnexe 1.4
- org.apache.orc:orc-core 1.5.5
- org.apache.orc:orc-mapreduce 1.5.5
- org.apache.orc:orc-shims 1.5.5
- org.apache.parquet:parquet-avro 1.10.1
- org.apache.parquet:parquet-column 1.10.1
- org.apache.parquet:parquet-common 1.10.1
- org.apache.parquet:parquet-encoding 1.10.1
- org.apache.parquet:parquet-format 2.4.0
- org.apache.parquet:parquet-hadoop 1.10.1
- org.apache.parquet:parquet-jackson 1.10.1
- org.apache.spark:spark-catalyst_2.11 2.4.5
- org.apache.spark:spark-core_2.11 2.4.5
- org.apache.spark:spark-graphx_2.11 2.4.5
- org.apache.spark:spark-kvstore_2.11 2.4.5
- org.apache.spark:spark-launcher_2.11 2.4.5
- org.apache.spark:spark-mllib-local_2.11 2.4.5
- org.apache.spark:spark-mllib_2.11 2.4.5
- org.apache.spark:spark-network-common_2.11 2.4.5
- org.apache.spark:spark-network-shuffle_2.11 2.4.5
- org.apache.spark:spark-sketch_2.11 2.4.5
- org.apache.spark:spark-sql_2.11 2.4.5
- org.apache.spark:spark-streaming_2.11 2.4.5
- org.apache.spark:spark-tags_2.11 2.4.5
- org.apache.spark:spark-unsafe_2.11 2.4.5
- org.apache.xbean:xbean-asm-util 4.8
- org.apache.xbean:xbean-asm6-shaded 4.8
- org.apache.yetus:audience-annotations 0.5.0
- org.bdgenomics.adam:adam-codegen-spark2_2.11 0.28.0
- org.bdgenomics.adam:adam-core-spark2_2.11 0.28.0
- org.bdgenomics.bdg-formats:bdg-formats 0.13.0
- org.bdgenomics.utils:utils-cli-spark2_2.11 0.2.15
- org.bdgenomics.utils:utils-intervalrdd-spark2_2.11 0.2.15
- org.bdgenomics.utils:utils-io-spark2_2.11 0.2.15
- org.bdgenomics.utils:utils-metrics-spark2_2.11 0.2.15
- org.bdgenomics.utils:utils-misc-spark2_2.11 0.2.15
- org.broadinstitute.hellbender.Main:gatk-package 4.2.2.0-local
- org.broadinstitute.hellbender.Main:gatk-package 4.2.2.0-spark
- org.codehaus.janino:commons-compiler 3.0.9
- org.codehaus.janino:janino 3.0.9
- org.codehaus.jettison:jettison 1.1
- org.codehaus.mojo:animal-sniffer-annotations 1.18
- org.codehaus.plexus:plexus-interpolation 1.0
- org.codehaus.plexus:plexus-utils 1.5.6
- org.codehaus.woodstox:stax2-api 3.1.4
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.disq-bio:disq 0.3.6
- org.eclipse.jetty:jetty-client 9.3.27.v20190418
- org.eclipse.jetty:jetty-continuation 9.3.27.v20190418
- org.eclipse.jetty:jetty-http 9.3.27.v20190418
- org.eclipse.jetty:jetty-io 9.3.27.v20190418
- org.eclipse.jetty:jetty-plus 9.3.27.v20190418
- org.eclipse.jetty:jetty-proxy 9.3.27.v20190418
- org.eclipse.jetty:jetty-security 9.3.27.v20190418
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