Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : pypi : PyVCF

Explore the latest package usage data for PyVCF in the pypi ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 154
Total downloads: 32,263,820

More details on packages.ecosyste.ms - JSON

broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

  • version: 0.6.8
Latest release: 11 months ago - 31,988,536 downloads - 912 dependencies
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 0.6.8
Latest release: 11 months ago - 86,066 downloads - 912 dependencies
genomicmedicinesweden/gms-artic-nanopore 0c599b9

  • version: 0.6.8
Latest release: about 1 year ago - 2,025 downloads - 153 dependencies
anjia0532/kubeflow-images-public.tensorflow-1.7.0-notebook-cpu v-base-1c46aec-891

  • version: 0.6.8
Latest release: about 6 years ago - 925 downloads - 3,445 dependencies
intelliseqngs/task_vcf-anno-dbnsfp 1.3.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: over 1 year ago - 60,110 downloads - 418 dependencies
intelliseqngs/task_bam-filter-mismatch 1.4.1

  • version: 0.6.8
Latest release: over 1 year ago - 21,820 downloads - 1,138 dependencies
intelliseqngs/bwa-mem-hg38 3.1.0

  • version: 0.6.8
Latest release: almost 4 years ago - 11,965 downloads - 233 dependencies
intelliseqngs/bwa-mem-grch38-no-alt 3.1.0

  • version: 0.6.8
Latest release: almost 4 years ago - 11,827 downloads - 233 dependencies
intelliseqngs/task_phasing-eagle 3.0.1-chrY-and-the-rest

  • version: 0.6.8
Latest release: about 2 years ago - 8,859 downloads - 235 dependencies
intelliseqngs/snpeff-grch38.100 1.0.0

  • version: 0.6.8
Latest release: over 4 years ago - 6,172 downloads - 245 dependencies
intelliseqngs/task_bam-metrics-grch38-no-alt 1.0.2

  • version: 0.6.8
Latest release: over 1 year ago - 5,097 downloads - 1,140 dependencies
intelliseqngs/ubuntu-toolbox 18.04_v0.12

  • version: 0.6.8
Latest release: almost 5 years ago - 4,938 downloads - 294 dependencies
intelliseqngs/snpeff-grch38.102 1.0.2

  • version: 0.6.8
Latest release: almost 4 years ago - 4,615 downloads - 266 dependencies
intelliseqngs/task_vcf-anno-repeat 1.0.1

  • version: 0.6.8
Latest release: almost 4 years ago - 4,322 downloads - 238 dependencies
intelliseqngs/task_interval-group 1.0.2

  • version: 0.6.8
Latest release: over 4 years ago - 3,058 downloads - 230 dependencies
intelliseqngs/multiqc 2.0.2

  • version: 0.6.8
Latest release: almost 2 years ago - 2,925 downloads - 281 dependencies
intelliseqngs/task_vcf-anno-func-gene 1.3.5

  • version: 0.6.8
Latest release: over 1 year ago - 3,027 downloads - 315 dependencies
intelliseqngs/task_bco-json-to-csv 0.0.4

  • version: 0.6.8
Latest release: about 4 years ago - 3,046 downloads - 233 dependencies
intelliseqngs/task_panel-generate 2.0.1

  • version: 0.6.8
Latest release: over 1 year ago - 2,256 downloads - 366 dependencies
intelliseqngs/gatk-4.1.9.0 1.0.0

  • version: 0.6.8
Latest release: almost 4 years ago - 2,222 downloads - 967 dependencies
intelliseqngs/task_vcf-anno-cosmic 2.0.0

  • version: 0.6.8
Latest release: about 1 year ago - 2,498 downloads - 346 dependencies
intelliseqngs/task_simulate-neat-hg38-chr-wise 1.0.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: over 4 years ago - 2,071 downloads - 265 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 0.6.8
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
intelliseqngs/task_bam-seq-grouping-grch38-no-alt 1.1.0

  • version: 0.6.8
Latest release: about 3 years ago - 1,905 downloads - 230 dependencies
intelliseqngs/hisat2 1.2.1

  • version: 0.6.8
Latest release: about 4 years ago - 1,577 downloads - 244 dependencies
intelliseqngs/bwa-mem 3.1.0

  • version: 0.6.8
Latest release: almost 4 years ago - 1,508 downloads - 233 dependencies
intelliseqngs/cufflinks 1.1.0

  • version: 0.6.8
Latest release: about 4 years ago - 1,227 downloads - 236 dependencies
intelliseqngs/task_bam-seq-grouping-hg38 1.1.0

  • version: 0.6.8
Latest release: about 3 years ago - 1,214 downloads - 230 dependencies
intelliseqngs/task_rna-seq-pysamstats 1.0.0

  • version: 0.6.8
Latest release: about 4 years ago - 1,038 downloads - 230 dependencies
intelliseqngs/task_vcf-qc 1.4.0

  • version: 0.6.8
Latest release: about 2 years ago - 1,408 downloads - 604 dependencies
intelliseqngs/task_vcftocsv 0.1.1

  • version: 0.6.8
Latest release: over 4 years ago - 796 downloads - 233 dependencies
intelliseqngs/bwa-mem-hg38-chr-wise 3.1.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: almost 4 years ago - 580 downloads - 233 dependencies
intelliseqngs/task_vcf-to-json 1.0.1

  • version: 0.6.8
Latest release: over 4 years ago - 543 downloads - 235 dependencies
intelliseqngs/task_bed-to-interval-list 1.1.5

  • version: 0.6.8
Latest release: over 1 year ago - 593 downloads - 1,057 dependencies
intelliseqngs/task_imputing-vcf-preproc 1.1.2

  • version: 0.6.8
Latest release: almost 4 years ago - 439 downloads - 248 dependencies
intelliseqngs/rna-bwa 1.1.0

  • version: 0.6.8
Latest release: over 4 years ago - 437 downloads - 236 dependencies
intelliseqngs/task_rna-seq-fastqc-overrep 1.1.1

  • version: 0.6.8
Latest release: over 4 years ago - 423 downloads - 237 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws latest

  • version: 0.6.8
Latest release: almost 2 years ago - 403 downloads - 849 dependencies
intelliseqngs/resources longranger_v0.1

  • version: 0.6.8
Latest release: over 4 years ago - 312 downloads - 1,305 dependencies
intelliseqngs/task_vcf-vqsr-indel-recalib-hg38 1.1.2

  • version: 0.6.8
Latest release: over 1 year ago - 304 downloads - 1,142 dependencies
intelliseqngs/bwa-mem-grch38-no-alt-chr-wise 3.1.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: almost 4 years ago - 306 downloads - 233 dependencies
intelliseqngs/gsort 1.0.1

  • version: 0.6.8
Latest release: over 1 year ago - 319 downloads - 315 dependencies
intelliseqngs/task_rna-seq-qc-stats 1.1.0

  • version: 0.6.8
Latest release: about 4 years ago - 227 downloads - 231 dependencies
intelliseqngs/task_rna-seq-concat-summary 1.1.0

  • version: 0.6.8
Latest release: about 4 years ago - 208 downloads - 230 dependencies
intelliseqngs/task_bam-wisecondorx 1.0.1-prodia

  • version: 0.6.8
Latest release: about 2 years ago - 203 downloads - 471 dependencies
intelliseqngs/task_resources-panels 0.1.3

  • version: 0.6.8
Latest release: over 4 years ago - 174 downloads - 230 dependencies
intelliseqngs/task_rna-seq-qc-stats-se 1.1.0

  • version: 0.6.8
Latest release: about 4 years ago - 168 downloads - 231 dependencies
intelliseqngs/gatk-4.2.0.0-hg38 1.1.0

  • version: 0.6.8
Latest release: about 3 years ago - 165 downloads - 1,057 dependencies
intelliseqngs/smoove-grch38-no-alt 1.1.0

  • version: 0.6.8
Latest release: about 3 years ago - 194 downloads - 540 dependencies
intelliseqngs/task_sv-breaks-pos 1.0.2

  • version: 0.6.8
Latest release: about 3 years ago - 156 downloads - 254 dependencies
intelliseqngs/lumpy 1.0.0

  • version: 0.6.8
Latest release: over 4 years ago - 150 downloads - 377 dependencies
intelliseqngs/task_rna-seq-concat-summary-se 1.1.0

  • version: 0.6.8
Latest release: about 4 years ago - 146 downloads - 258 dependencies
broadinstitute/pcawg_full 7

  • version: 0.6.4, 0.6.8
Latest release: about 7 years ago - 146 downloads - 889 dependencies
qdidiscoveryservices/gatk-v2461_bwa_aws_vardict latest

  • version: 0.6.8
Latest release: almost 2 years ago - 131 downloads - 1,081 dependencies
intelliseqngs/task_sv-report 1.0.0

  • version: 0.6.8
Latest release: about 4 years ago - 140 downloads - 1,306 dependencies
intelliseqngs/task_fq-bowtie 1.1.0

  • version: 0.6.8
Latest release: over 2 years ago - 134 downloads - 356 dependencies
intelliseqngs/task_sv-anno-panel 1.1.0

  • version: 0.6.8
Latest release: almost 4 years ago - 154 downloads - 354 dependencies
intelliseqngs/collect-hs-metrics 1.0.0

  • version: 0.6.8
Latest release: over 4 years ago - 131 downloads - 928 dependencies
intelliseqngs/gatk-4.2.4.1 1.0.1

  • version: 0.6.8
Latest release: almost 2 years ago - 161 downloads - 1,118 dependencies
ctomlins/supernova v2.1.1

  • version: 0.6.8
Latest release: about 6 years ago - 120 downloads - 297 dependencies
intelliseqngs/task_simulate-neat-grch38-chr-wise 1.0.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: over 4 years ago - 132 downloads - 291 dependencies
intelliseqngs/anno-frequencies-exome_grch38 1.0.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: over 4 years ago - 126 downloads - 334 dependencies
intelliseqngs/svtyper 1.0.0

  • version: 0.6.8
Latest release: over 4 years ago - 100 downloads - 299 dependencies
intelliseqngs/task_simulate-neat-grch38-no-alt-chr-wise 1.0.0-chrY-and-the-rest

  • version: 0.6.8
Latest release: over 4 years ago - 93 downloads - 291 dependencies
intelliseqngs/task_pdf-merge 1.2.1

  • version: 0.6.8
Latest release: over 4 years ago - 96 downloads - 357 dependencies
anjia0532/kubeflow-images-public.kubeflow-yelp-demo-cpu latest

  • version: 0.6.8
Latest release: about 6 years ago - 93 downloads - 2,632 dependencies
intelliseqngs/resources-pgx-polygenic 1.2.4

  • version: 0.6.8
Latest release: about 1 year ago - 300 downloads - 1,059 dependencies
intelliseqngs/smoove-hg38 1.1.0

  • version: 0.6.8
Latest release: about 3 years ago - 88 downloads - 540 dependencies
intelliseqngs/variant-descriptor 1.0.0

  • version: 0.6.8
Latest release: over 4 years ago - 87 downloads - 334 dependencies
intelliseqngs/report-variants-from-vcf 1.0.4

  • version: 0.6.8
Latest release: over 4 years ago - 88 downloads - 1,146 dependencies
intelliseqngs/task_bam-metrics-hg38 1.0.2

  • version: 0.6.8
Latest release: over 1 year ago - 79 downloads - 1,144 dependencies
intelliseqngs/task_rna-seq-count-concat 1.0.0

  • version: 0.6.8
Latest release: about 4 years ago - 79 downloads - 258 dependencies
intelliseqngs/task_rna-seq-align-stats-bwa 1.0.0

  • version: 0.6.8
Latest release: about 4 years ago - 77 downloads - 258 dependencies
intelliseqngs/task_sv-cov-plot 1.0.0

  • version: 0.6.8
Latest release: over 3 years ago - 83 downloads - 597 dependencies
intelliseqngs/task_nipt-anno 1.2.0

  • version: 0.6.8
Latest release: about 2 years ago - 71 downloads - 102 dependencies
intelliseqngs/snpsift 1.2.0

  • version: 0.6.8
Latest release: over 1 year ago - 78 downloads - 41 dependencies
intelliseqngs/task_pgx-merge-genotypes 1.2.0

  • version: 0.6.8
Latest release: over 3 years ago - 61 downloads - 251 dependencies
intelliseqngs/task_vcf-anno-custom 1.0.1

  • version: 0.6.8
Latest release: about 4 years ago - 58 downloads - 1,025 dependencies
intelliseqngs/ensembl-cosmic-to-bed 1.0.1

  • version: 0.6.8
Latest release: over 3 years ago - 53 downloads - 261 dependencies
intelliseqngs/mkfastq 0.0.2

  • version: 0.6.8
Latest release: over 4 years ago - 52 downloads - 505 dependencies
genieusgenomics/pbsv 2.8.0

PacBio structural variant (SV) calling and analysis tools

  • version: 0.6.8
Latest release: almost 2 years ago - 48 downloads - 384 dependencies
anjia0532/google-samples.ml-pipeline-dataflow-tftbq-taxi latest

  • version: 0.6.8
Latest release: over 6 years ago - 50 downloads - 286 dependencies
ctomlins/supertellnova latest

  • version: 0.6.8
Latest release: almost 4 years ago - 51 downloads - 309 dependencies
intelliseqngs/reporting-csv-generator v0.1

  • version: 0.6.8
Latest release: over 4 years ago - 49 downloads - 288 dependencies
intelliseqngs/task_bed-liftover 1.0.0

  • version: 0.6.8
Latest release: over 3 years ago - 59 downloads - 257 dependencies
intelliseqngs/task_calibrate-dragstr-model-grch38-no-alt 1.0.1

  • version: 0.6.8
Latest release: over 1 year ago - 58 downloads - 1,049 dependencies
anderspitman/iobio-gru-backend v1.13.0

  • version: 0.6.8
Latest release: over 1 year ago - 70 downloads - 844 dependencies
intelliseqngs/smoove 1.0.0

  • version: 0.6.8
Latest release: about 4 years ago - 47 downloads - 540 dependencies
chriswyatt/jcvi version2.0

  • version: 0.4.3
Latest release: about 2 years ago - 121 downloads - 798 dependencies
nbutter/gatk_tools latest

GATK and other bioinformatics tools packaged together.

  • version: 0.6.8
Latest release: about 5 years ago - 44 downloads - 869 dependencies