nfcore/diaproteomics : dev
A Docker container for nf-core/diaproteomics
Latest release: about 4 years ago - 7,136 downloads - 488 dependencies
JSONDependencies
- @PKGNAME@ @VERSION@
- BH 1.75.0-0
- Biobase 2.50.0
- BiocGenerics 0.36.0
- BiocManager 1.30.10
- BiocParallel 1.24.0
- DBI 1.1.0
- DIAlignR 1.99.18
- KernSmooth 2.23-18
- MASS 7.3-54
- MSstats 3.20.1
- Matrix 1.3-4
- ProtGenerics 1.22.0
- R6 2.5.0
- RColorBrewer 1.1-2
- RMSNumpress 1.0.1
- RSQLite 2.2.1
- Rcpp 1.0.5
- RcppEigen 0.3.3.9.1
- Rhdf5lib 1.12.1
- ape 5.4-1
- assertthat 0.2.1
- backports 1.2.1
- base 4.0.2
- bit64 4.0.5
- bit 4.0.4
- bitops 1.0-7
- blob 1.2.1
- boot 1.3-28
- brio 1.1.2
- broom 0.7.7
- caTools 1.18.2
- cachem 1.0.5
- callr 3.7.0
- cli 2.5.0
- codetools 0.2-18
- colorspace 2.0-1
- compiler 4.0.2
- crayon 1.4.1
- data.table 1.14.0
- datasets 4.0.2
- desc 1.3.0
- diffobj 0.3.4
- digest 0.6.27
- doSNOW 1.0.19
- dplyr 1.0.2
- ellipsis 0.3.2
- evaluate 0.14
- fansi 0.5.0
- farver 2.1.0
- fastmap 1.1.0
- fastmatch 1.1-0
- foreach 1.5.1
- formatR 1.11
- futile.logger 1.4.3
- futile.options 1.0.1
- gdata 2.18.0
- generics 0.1.0
- ggplot2 3.3.2
- ggrepel 0.9.1
- glue 1.4.2
- gplots 3.1.0
- grDevices 4.0.2
- graphics 4.0.2
- grid 4.0.2
- gridExtra 2.3
- gtable 0.3.0
- gtools 3.9.2
- igraph 1.2.6
- isoband 0.2.4
- iterators 1.0.13
- jsonlite 1.7.2
- labeling 0.4.2
- lambda.r 1.2.4
- lattice 0.20-44
- lifecycle 1.0.0
- limma 3.44.1
- lme4 1.1-27
- magrittr 2.0.1
- marray 1.66.0
- memoise 2.0.0
- methods 4.0.2
- mgcv 1.8-36
- minpack.lm 1.2-1
- minqa 1.2.4
- munsell 0.5.0
- mzR 2.24.0
- ncdf4 1.17
- nlme 3.1-150
- nloptr 1.2.2.2
- parallel 4.0.2
- phangorn 2.5.5
- pillar 1.6.1
- pkgconfig 2.0.3
- pkgload 1.2.1
- plogr 0.2.0
- plyr 1.8.6
- pracma 2.3.3
- praise 1.0.0
- preprocessCore 1.50.0
- processx 3.5.2
- ps 1.6.0
- purrr 0.3.4
- quadprog 1.5-8
- randomForest 4.6-14
- rappdirs 0.3.3
- rematch2 2.1.2
- remotes 2.2.0
- reshape2 1.4.4
- reticulate 1.18
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- rstudioapi 0.13
- scales 1.1.1
- signal 0.7-6
- snow 0.4-3
- splines 4.0.2
- statmod 1.4.35
- stats4 4.0.2
- stats 4.0.2
- stringi 1.5.3
- stringr 1.4.0
- survival 3.2-11
- tcltk 4.0.2
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- testthat 3.0.3
- tibble 3.1.2
- tidyr 1.1.2
- tidyselect 1.1.1
- tools 4.0.2
- translations 4.0.2
- utf8 1.2.1
- utils 4.0.2
- vctrs 0.3.8
- viridisLite 0.4.0
- waldo 0.2.5
- withr 2.4.2
- zlibbioc 1.36.0
- zoo 1.8-8
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- debian/psmisc 23.2-1
- debian/publicsuffix 20190415.1030-1
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- debian/zlib1g 1:1.2.11.dfsg-1
- Recalibration:Recalibration 1.0
- US_export_policy:US_export_policy *
- canopus_predict_oss:canopus_predict_oss 1.1.3
- ch.qos.logback:logback-classic 1.1.6
- ch.qos.logback:logback-core 1.1.6
- charsets:charsets *
- chemdb_file_oss:chemdb_file_oss 1.1.3
- chemdb_rest_oss:chemdb_rest_oss 1.1.3
- chemdb_sql_oss:chemdb_sql_oss 1.1.3
- chemical_db_oss:chemical_db_oss 1.1.3
- chemistry_base:chemistry_base 4.0.1
- cldrdata:cldrdata *
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- com.github.davidmoten:guava-mini 0.1
- com.github.davidmoten:rtree 0.8-RC10
- com.github.davidmoten:rxjava-extras 0.7
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- com.google.classpath-explorer:classpath-explorer 1.0
- com.google.code.gson:gson 2.6.2
- com.google.guava:guava 18.0
- com.google.guava:guava 21.0
- com.ongres.scram:client 1.0.0-beta.2
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- com.sun.xml.txw2:txw2 20110809
- com.sun.xsom:xsom 20110809
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- com.sun:sunec 1.8.0_152
- com.sun:sunjce_provider 1.8.0_152
- com.sun:sunpkcs11 1.8.0_152
- commons-codec:commons-codec 1.7
- commons-codec:commons-codec 1.9
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- commons-io:commons-io 2.4
- commons-logging:commons-logging 1.2
- de.unijena.bioinf:GraphUtils 1.1
- de.unijena.bioinf:java-utilities 1.0-SNAPSHOT
- dnsns:dnsns *
- dt:dt *
- edu.ucsd.msgf:MSGFPlus 1.0.0-SNAPSHOT
- error-reporter:error-reporter 0.9.2
- fingerblast_oss:fingerblast_oss 1.1.3
- fingerid_db_oss:fingerid_db_oss 1.1.3
- fingerid_utils_oss:fingerid_utils_oss 1.1.3
- fingerprint_pvalues_oss:fingerprint_pvalues_oss 1.1.3
- fingerprinter_oss:fingerprinter_oss 1.1.3
- fragmentation_tree_construction:fragmentation_tree_construction 4.0.1
- gibbs_sampling:gibbs_sampling 4.0.1
- glazedlists_java16:glazedlists_java16 1.10.0
- io:io 4.0.1
- isotope_pattern_analysis:isotope_pattern_analysis 4.0.1
- jaccess:jaccess *
- jama:jama 1.0.3
- javax.json:javax.json-api 1.0
- javax.vecmath:vecmath 1.5.2
- javax.xml.bind:jaxb-api 2.2.7
- jconsole:jconsole *
- jewelcli:jewelcli 0.8.9
- jfxrt:jfxrt *
- jfxswt:jfxswt *
- jjobs-core:jjobs-core 0.9.6
- jjobs-swing:jjobs-swing 0.9.6
- json:json 1.0
- jsse:jsse 1.8.0_152-release
- local_policy:local_policy *
- localedata:localedata *
- log4j:log4j 1.2.14
- luciphor2:luciphor2 *
- management-agent:management-agent *
- mass_decomposer:mass_decomposer 4.0.1
- nashorn:nashorn 1.8.0_152-release-1056-b12
- net.iharder:base64 2.3.8
- net.sf.jnati:jnati-core 0.4
- net.sf.jnati:jnati-deploy 0.4
- net.sf.jni-inchi:jni-inchi 0.8
- net.sf.opencsv:opencsv 2.3
- net.sourceforge.cpdetector:cpdetector 1.0.7
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- tools:tools *
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