Ecosyste.ms: Docker
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cjagla/seurat_shiny : latest
Latest release: over 1 year ago - 8 downloads - 949 dependencies
JSONDependencies
- BH 1.81.0-1
- BiocManager 1.30.20
- DBI 1.1.3
- DT 0.27
- FNN 1.1.3.1
- KernSmooth 2.23-20
- MASS 7.3-57
- MASS 7.3-58.1
- Matrix 1.4-1
- Matrix 1.5-3
- R6 2.5.1
- RANN 2.6.1
- RColorBrewer 1.1-3
- ROCR 1.0-11
- Rcpp 1.0.10
- RcppAnnoy 0.0.20
- RcppArmadillo 0.12.0.1.0
- RcppEigen 0.3.3.9.3
- RcppProgress 0.4.2
- RcppProgressArmadillo 0.2
- RcppProgressETA 0.1
- RcppProgressExample 0.2
- RcppTOML 0.2.2
- Rtsne 0.16
- Seurat 4.3.0
- SeuratObject 4.1.3
- abind 1.4-5
- askpass 1.1
- backports 1.4.1
- base64enc 0.1-3
- base 4.2.1
- bit64 4.0.5
- bit 4.0.5
- bitops 1.0-7
- blob 1.2.3
- boot 1.3-28
- broom 1.0.3
- bslib 0.4.2
- caTools 1.18.2
- cachem 1.0.7
- callr 3.7.3
- cellranger 1.1.0
- class 7.3-20
- cli 3.6.0
- clipr 0.8.0
- cluster 2.1.3
- cluster 2.1.4
- codetools 0.2-18
- colorspace 2.1-0
- commonmark 1.8.1
- compiler 4.2.1
- conflicted 1.2.0
- cowplot 1.1.1
- cpp11 0.4.3
- crayon 1.5.2
- crosstalk 1.2.0
- curl 5.0.0
- data.table 1.14.8
- datasets 4.2.1
- dbplyr 2.3.1
- deldir 1.0-6
- digest 0.6.31
- docopt 0.7.1
- dplyr 1.1.0
- dqrng 0.3.0
- dtplyr 1.3.0
- ellipsis 0.3.2
- evaluate 0.20
- fansi 1.0.4
- farver 2.1.1
- fastmap 1.1.1
- fitdistrplus 1.1-8
- fontawesome 0.5.0
- forcats 1.0.0
- foreign 0.8-82
- fresh 0.2.0
- fs 1.6.1
- future.apply 1.10.0
- future 1.32.0
- gargle 1.3.0
- generics 0.1.3
- ggplot2 3.4.1
- ggrepel 0.9.3
- ggridges 0.5.4
- globals 0.16.2
- glue 1.6.2
- goftest 1.2-3
- googledrive 2.0.0
- googlesheets4 1.0.1
- gplots 3.1.3
- grDevices 4.2.1
- graphics 4.2.1
- grid 4.2.1
- gridExtra 2.3
- gtable 0.3.1
- gtools 3.9.4
- haven 2.5.2
- here 1.0.1
- highr 0.10
- hms 1.1.2
- htmltools 0.5.4
- htmlwidgets 1.6.1
- httpuv 1.6.9
- httr 1.4.5
- ica 1.0-3
- ids 1.0.1
- igraph 1.4.1
- irlba 2.3.5.1
- isoband 0.2.7
- jquerylib 0.1.4
- jsonlite 1.8.4
- knitr 1.42
- labeling 0.4.2
- later 1.3.0
- lattice 0.20-45
- lazyeval 0.2.2
- leiden 0.4.3
- lifecycle 1.0.3
- listenv 0.9.0
- littler 0.3.16
- lmtest 0.9-40
- lubridate 1.9.2
- magrittr 2.0.3
- matrixStats 0.63.0
- memoise 2.0.1
- methods 4.2.1
- mgcv 1.8-40
- mgcv 1.8-41
- mime 0.12
- miniUI 0.1.1.1
- modelr 0.1.10
- munsell 0.5.0
- nlme 3.1-157
- nlme 3.1-160
- nnet 7.3-17
- openssl 2.0.5
- packrat 0.9.1
- parallel 4.2.1
- parallelly 1.34.0
- patchwork 1.1.2
- pbapply 1.7-0
- periscope 1.0.1
- pillar 1.8.1
- pkgconfig 2.0.3
- plotly 4.10.1
- plyr 1.8.8
- png 0.1-8
- polyclip 1.10-4
- prettyunits 1.1.1
- processx 3.8.0
- progress 1.2.2
- progressr 0.13.0
- promises 1.2.0.1
- ps 1.7.2
- purrr 1.0.1
- ragg 1.2.5
- rappdirs 0.3.3
- readr 2.1.4
- readxl 1.4.2
- rematch2 2.1.2
- rematch 1.0.1
- renv 0.17.0
- reprex 2.0.2
- reshape2 1.4.4
- reticulate 1.28
- rlang 1.0.6
- rmarkdown 2.20
- rpart 4.1.16
- rprojroot 2.0.3
- rsconnect 0.8.29
- rstudioapi 0.14
- rvest 1.0.3
- sass 0.4.5
- scales 1.2.1
- scattermore 0.8
- sctransform 0.3.5
- selectr 0.4-2
- shiny 1.7.4
- shinyBS 0.61.1
- shinydashboard 0.7.2
- shinythemes 1.2.0
- sitmo 2.0.2
- sourcetools 0.1.7-1
- sp 1.6-0
- spatial 7.3-15
- spatstat.data 3.0-0
- spatstat.explore 3.0-6
- spatstat.geom 3.0-6
- spatstat.random 3.1-3
- spatstat.sparse 3.0-0
- spatstat.utils 3.0-1
- splines 4.2.1
- stats4 4.2.1
- stats 4.2.1
- stringi 1.7.12
- stringr 1.5.0
- survival 3.3-1
- survival 3.4-0
- sys 3.4.1
- systemfonts 1.0.4
- tcltk 4.2.1
- tensor 1.5
- testRcppAttributePackage 1.0
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- textshaping 0.3.6
- tibble 3.2.0
- tidyr 1.3.0
- tidyselect 1.2.0
- tidyverse 2.0.0
- timechange 0.2.0
- tinytex 0.44
- tools 4.2.1
- translations 4.2.1
- tzdb 0.3.0
- utf8 1.2.3
- utils 4.2.1
- uuid 1.1-0
- uwot 0.1.14
- vctrs 0.5.2
- viridisLite 0.4.1
- vroom 1.6.1
- withr 2.5.0
- writexl 1.4.2
- xfun 0.37
- xml2 1.3.3
- xtable 1.8-4
- yaml 2.3.7
- zoo 1.8-11
- ubuntu/adduser 3.118ubuntu2
- ubuntu/apt 2.0.9
- ubuntu/base-files 11ubuntu5.6
- ubuntu/base-passwd 3.5.47
- ubuntu/bash-completion 1:2.10-1ubuntu1
- ubuntu/bash 5.0-6ubuntu1.2
- ubuntu/binutils-common 2.34-6ubuntu1.4
- ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1.4
- ubuntu/binutils 2.34-6ubuntu1.4
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.3
- ubuntu/bzip2 1.0.8-2
- ubuntu/ca-certificates-java 20190405ubuntu1
- ubuntu/ca-certificates 20211016ubuntu0.20.04.1
- ubuntu/coreutils 8.30-3ubuntu2
- ubuntu/cpp-9 9.4.0-1ubuntu1~20.04.1
- ubuntu/cpp 4:9.3.0-1ubuntu2
- ubuntu/dash 0.5.10.2-6
- ubuntu/debconf 1.5.73
- ubuntu/debianutils 4.9.1
- ubuntu/diffutils 1:3.7-3
- ubuntu/dirmngr 2.2.19-3ubuntu2.2
- ubuntu/distro-info-data 0.43ubuntu1.11
- ubuntu/dpkg 1.19.7ubuntu3.2
- ubuntu/e2fsprogs 1.45.5-2ubuntu1.1
- ubuntu/fdisk 2.34-0.1ubuntu9.3
- ubuntu/file 1:5.38-4
- ubuntu/findutils 4.7.0-1ubuntu1
- ubuntu/fontconfig-config 2.13.1-2ubuntu3
- ubuntu/fontconfig 2.13.1-2ubuntu3
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/fonts-lmodern 2.004.5-6
- ubuntu/fonts-texgyre 20180621-3
- ubuntu/freeglut3 2.8.1-3
- ubuntu/g -9 9.4.0-1ubuntu1~20.04.1
- ubuntu/g 4:9.3.0-1ubuntu2
- ubuntu/gcc-10-base 10.3.0-1ubuntu1~20.04
- ubuntu/gcc-9-base 9.4.0-1ubuntu1~20.04.1
- ubuntu/gcc-9 9.4.0-1ubuntu1~20.04.1
- ubuntu/gcc 4:9.3.0-1ubuntu2
- ubuntu/gdebi-core 0.9.5.7 nmu3
- ubuntu/gfortran-9 9.4.0-1ubuntu1~20.04.1
- ubuntu/gfortran 4:9.3.0-1ubuntu2
- ubuntu/gpg-agent 2.2.19-3ubuntu2.2
- ubuntu/gpgv 2.2.19-3ubuntu2.2
- ubuntu/grep 3.4-1
- ubuntu/gsfonts 1:8.11 urwcyr1.0.7~pre44-4.4
- ubuntu/gzip 1.10-0ubuntu4.1
- ubuntu/hostname 3.23
- ubuntu/icu-devtools 66.1-2ubuntu2.1
- ubuntu/init-system-helpers 1.57
- ubuntu/java-common 0.72
- ubuntu/libacl1 2.2.53-6
- ubuntu/libamd2 1:5.7.1 dfsg-2
- ubuntu/libapt-pkg6.0 2.0.9
- ubuntu/libasan5 9.4.0-1ubuntu1~20.04.1
- ubuntu/libasn1-8-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libatomic1 10.3.0-1ubuntu1~20.04
- ubuntu/libattr1 1:2.4.48-5
- ubuntu/libaudit-common 1:2.8.5-2ubuntu6
- ubuntu/libaudit1 1:2.8.5-2ubuntu6
- ubuntu/libbinutils 2.34-6ubuntu1.4
- ubuntu/libblas-dev 3.9.0-1build1
- ubuntu/libblas3 3.9.0-1build1
- ubuntu/libblkid-dev 2.34-0.1ubuntu9.3
- ubuntu/libblkid1 2.34-0.1ubuntu9.3
- ubuntu/libbrotli1 1.0.7-6ubuntu0.1
- ubuntu/libbsd0 0.10.0-1
- ubuntu/libbtf1 1:5.7.1 dfsg-2
- ubuntu/libbz2-1.0 1.0.8-2
- ubuntu/libbz2-ocaml 0.6.0-10build1
- ubuntu/libc-bin 2.31-0ubuntu9.9
- ubuntu/libc-dev-bin 2.31-0ubuntu9.9
- ubuntu/libc6-dev 2.31-0ubuntu9.9
- ubuntu/libc6 2.31-0ubuntu9.9
- ubuntu/libcairo-gobject2 1.16.0-4ubuntu1
- ubuntu/libcairo-script-interpreter2 1.16.0-4ubuntu1
- ubuntu/libcairo2-dev 1.16.0-4ubuntu1
- ubuntu/libcairo2 1.16.0-4ubuntu1
- ubuntu/libcamd2 1:5.7.1 dfsg-2
- ubuntu/libcap-ng0 0.7.9-2.1build1
- ubuntu/libcc1-0 10.3.0-1ubuntu1~20.04
- ubuntu/libccolamd2 1:5.7.1 dfsg-2
- ubuntu/libcholmod3 1:5.7.1 dfsg-2
- ubuntu/libcolamd2 1:5.7.1 dfsg-2
- ubuntu/libcom-err2 1.45.5-2ubuntu1.1
- ubuntu/libcrypt-dev 1:4.4.10-10ubuntu4
- ubuntu/libcrypt1 1:4.4.10-10ubuntu4
- ubuntu/libctf-nobfd0 2.34-6ubuntu1.4
- ubuntu/libctf0 2.34-6ubuntu1.4
- ubuntu/libcurl4-openssl-dev 7.68.0-1ubuntu2.18
- ubuntu/libcurl4 7.68.0-1ubuntu2.18
- ubuntu/libcxsparse3 1:5.7.1 dfsg-2
- ubuntu/libdatrie1 0.2.12-3
- ubuntu/libdb5.3 5.3.28 dfsg1-0.6ubuntu2
- ubuntu/libdebconfclient0 0.251ubuntu1
- ubuntu/libdpkg-perl 1.19.7ubuntu3.2
- ubuntu/libdrm-amdgpu1 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-common 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-intel1 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-nouveau2 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-radeon1 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm2 2.4.107-8ubuntu1~20.04.2
- ubuntu/libedit2 3.1-20191231-1
- ubuntu/libelf1 0.176-1.1build1
- ubuntu/libexpat1-dev 2.2.9-1ubuntu0.6
- ubuntu/libexpat1 2.2.9-1ubuntu0.6
- ubuntu/libext2fs2 1.45.5-2ubuntu1.1
- ubuntu/libfakeroot 1.24-1
- ubuntu/libfdisk1 2.34-0.1ubuntu9.3
- ubuntu/libffi-dev 3.3-4
- ubuntu/libffi7 3.3-4
- ubuntu/libfindlib-ocaml 1.8.1-1build3
- ubuntu/libfontconfig1-dev 2.13.1-2ubuntu3
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- ubuntu/libfreetype-dev 2.10.1-2ubuntu0.2
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- ubuntu/libgfortran-9-dev 9.4.0-1ubuntu1~20.04.1
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- ubuntu/libgl1-mesa-glx 21.2.6-0ubuntu0.1~20.04.2
- ubuntu/libgl1 1.3.2-1~ubuntu0.20.04.2
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- ubuntu/libgssapi-krb5-2 1.17-6ubuntu4.2
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- ubuntu/libjpeg8 8c-2ubuntu8
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- ubuntu/libkeyutils1 1.6-6ubuntu1.1
- ubuntu/libklu1 1:5.7.1 dfsg-2
- ubuntu/libkrb5-26-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libkrb5-3 1.17-6ubuntu4.2
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- ubuntu/liblapack-dev 3.9.0-1build1
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- ubuntu/libldap-2.4-2 2.4.49 dfsg-2ubuntu1.9
- ubuntu/libldap-common 2.4.49 dfsg-2ubuntu1.9
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- ubuntu/liblsan0 10.3.0-1ubuntu1~20.04
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- ubuntu/liblzma-doc 5.2.4-1ubuntu1.1
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- ubuntu/liblzo2-2 2.10-2
- ubuntu/libmagic-mgc 1:5.38-4
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- ubuntu/libmetis5 5.1.0.dfsg-5
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- ubuntu/libmpc3 1.1.0-1
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- ubuntu/libp11-kit0 0.23.20-1ubuntu0.1
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- ubuntu/libpam-runtime 1.3.1-5ubuntu4.6
- ubuntu/libpam0g 1.3.1-5ubuntu4.6
- ubuntu/libpango-1.0-0 1.44.7-2ubuntu4
- ubuntu/libpangocairo-1.0-0 1.44.7-2ubuntu4
- ubuntu/libpangoft2-1.0-0 1.44.7-2ubuntu4
- ubuntu/libpaper1 1.1.28
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- ubuntu/libselinux1-dev 3.0-1build2
- ubuntu/libselinux1 3.0-1build2
- ubuntu/libsemanage-common 3.0-1build2
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- ubuntu/libsm-dev 2:1.2.3-1
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- ubuntu/libspqr2 1:5.7.1 dfsg-2
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- ubuntu/libss2 1.45.5-2ubuntu1.1
- ubuntu/libssh-4 0.9.3-2ubuntu2.2
- ubuntu/libssl-dev 1.1.1f-1ubuntu2.17
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- ubuntu/libstdc 6 10.3.0-1ubuntu1~20.04
- ubuntu/libsuitesparse-dev 1:5.7.1 dfsg-2
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- ubuntu/libsystemd0 245.4-4ubuntu3.19
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- ubuntu/libthai-data 0.1.28-3
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- ubuntu/libtiff-doc 4.1.0 git191117-2ubuntu0.20.04.8
- ubuntu/libtiff-opengl 4.1.0 git191117-2ubuntu0.20.04.8
- ubuntu/libtiff-tools 4.1.0 git191117-2ubuntu0.20.04.8
- ubuntu/libtiff5 4.1.0 git191117-2ubuntu0.20.04.8
- ubuntu/libtiffxx5 4.1.0 git191117-2ubuntu0.20.04.8
- ubuntu/libtinfo6 6.2-0ubuntu2
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