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broadinstitute/pcawg_broad_wgs_variant_callers : mutect_2percent_floor
pcawg_broad_wgs_variant_callers
Latest release: about 7 years ago - 268 downloads - 865 dependencies
JSONDependencies
- BH 1.65.0-1
- BiocGenerics 0.24.0
- BiocInstaller 1.28.0
- BiocParallel 1.12.0
- Biostrings 2.46.0
- DNAcopy 1.52.0
- GenomeInfoDb 1.14.0
- GenomeInfoDbData 1.0.0
- GenomicRanges 1.30.1
- IRanges 2.12.0
- KernSmooth 2.23-15
- MASS 7.3-48
- Matrix 1.2-11
- RCurl 1.95-4.10
- Rsamtools 1.30.0
- S4Vectors 0.16.0
- XVector 0.18.0
- base 3.4.3
- bitops 1.0-6
- boot 1.3-20
- class 7.3-14
- cluster 2.0.6
- codetools 0.2-15
- compiler 3.4.3
- data.table 1.10.4-3
- datasets 3.4.3
- foreign 0.8-69
- futile.logger 1.4.3
- futile.options 1.0.0
- getopt 1.20.1
- grDevices 3.4.3
- graphics 3.4.3
- grid 3.4.3
- lambda.r 1.2
- lattice 0.20-35
- methods 3.4.3
- mgcv 1.8-23
- nlme 3.1-131
- nnet 7.3-12
- optparse 1.4.4
- parallel 3.4.3
- rpart 4.1-12
- snow 0.4-2
- spatial 7.3-10
- splines 3.4.3
- stats4 3.4.3
- stats 3.4.3
- survival 2.41-3
- tcltk 3.4.3
- tools 3.4.3
- translations 3.4.3
- utils 3.4.3
- zlibbioc 1.24.0
- ubuntu/adduser 3.113 nmu3ubuntu3
- ubuntu/apt-utils 1.0.1ubuntu2.17
- ubuntu/apt 1.0.1ubuntu2.17
- ubuntu/autoconf 2.69-6
- ubuntu/automake 1:1.14.1-2ubuntu1
- ubuntu/autotools-dev 20130810.1
- ubuntu/base-files 7.2ubuntu5.5
- ubuntu/base-passwd 3.5.33
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- ubuntu/bc 1.06.95-8ubuntu1
- ubuntu/binutils 2.24-5ubuntu14.2
- ubuntu/bsdmainutils 9.0.5ubuntu1
- ubuntu/bsdutils 1:2.20.1-5.1ubuntu20.9
- ubuntu/build-essential 11.6ubuntu6
- ubuntu/busybox-initramfs 1:1.21.0-1ubuntu1
- ubuntu/byobu 5.77-0ubuntu1.2
- ubuntu/bzip2 1.0.6-5
- ubuntu/ca-certificates 20170717~14.04.1
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- ubuntu/console-setup 1.70ubuntu8
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