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thesushantpatil/arriba_v2.4.0_threads32_amd64 : latest
Latest release: over 1 year ago - 10 downloads - 310 dependencies
JSONDependencies
- mgcv 1.8-31
- nlme 3.1-144
- nnet 7.3-13
- parallel 3.6.3
- rpart 4.1-15
- shape 1.4.4
- snow 0.4-3
- spatial 7.3-11
- splines 3.6.3
- stats4 3.6.3
- stats 3.6.3
- survival 3.1-8
- tcltk 3.6.3
- tools 3.6.3
- translations 3.6.3
- utils 3.6.3
- zlibbioc 1.32.0
- methods 3.6.3
- @PKGNAME@ @VERSION@
- BH 1.66.0-1
- Biobase 2.46.0
- BiocGenerics 0.32.0
- BiocParallel 1.20.1
- Biostrings 2.54.0
- DelayedArray 0.12.2
- GenomeInfoDb 1.22.0
- GenomeInfoDbData 1.2.2
- GenomicAlignments 1.22.1
- GenomicRanges 1.38.0
- GlobalOptions 0.1.1
- IRanges 2.20.2
- KernSmooth 2.23-16
- MASS 7.3-51.5
- Matrix 1.2-18
- RCurl 1.98-1.1
- Rhtslib 1.18.1
- Rsamtools 2.2.3
- S4Vectors 0.24.3
- SummarizedExperiment 1.16.1
- XVector 0.26.0
- base 3.6.3
- bitops 1.0-6
- boot 1.3-24
- circlize 0.4.8
- class 7.3-15
- cluster 2.1.0
- codetools 0.2-16
- colorspace 1.4-1
- compiler 3.6.3
- datasets 3.6.3
- foreign 0.8-75
- formatR 1.7
- futile.logger 1.4.3
- futile.options 1.0.1
- grDevices 3.6.3
- graphics 3.6.3
- grid 3.6.3
- lambda.r 1.2.4
- lattice 0.20-40
- matrixStats 0.55.0
- ubuntu/adduser 3.118ubuntu2
- ubuntu/apt 2.0.9
- ubuntu/base-files 11ubuntu5.7
- ubuntu/base-passwd 3.5.47
- ubuntu/bash 5.0-6ubuntu1.2
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.4
- ubuntu/bzip2 1.0.8-2
- ubuntu/ca-certificates 20230311ubuntu0.20.04.1
- ubuntu/coreutils 8.30-3ubuntu2
- ubuntu/dash 0.5.10.2-6
- ubuntu/debconf 1.5.73
- ubuntu/debianutils 4.9.1
- ubuntu/diffutils 1:3.7-3
- ubuntu/dpkg 1.19.7ubuntu3.2
- ubuntu/e2fsprogs 1.45.5-2ubuntu1.1
- ubuntu/fdisk 2.34-0.1ubuntu9.4
- ubuntu/findutils 4.7.0-1ubuntu1
- ubuntu/fontconfig-config 2.13.1-2ubuntu3
- ubuntu/fontconfig 2.13.1-2ubuntu3
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/gcc-10-base 10.3.0-1ubuntu1~20.04
- ubuntu/gcc-7-base 7.5.0-6ubuntu2
- ubuntu/gcc-8-base 8.4.0-3ubuntu2
- ubuntu/gpgv 2.2.19-3ubuntu2.2
- ubuntu/grep 3.4-1
- ubuntu/gzip 1.10-0ubuntu4.1
- ubuntu/hostname 3.23
- ubuntu/init-system-helpers 1.57
- ubuntu/libacl1 2.2.53-6
- ubuntu/libapt-pkg6.0 2.0.9
- ubuntu/libasan4 7.5.0-6ubuntu2
- ubuntu/libasn1-8-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libatomic1 10.3.0-1ubuntu1~20.04
- ubuntu/libattr1 1:2.4.48-5
- ubuntu/libaudit-common 1:2.8.5-2ubuntu6
- ubuntu/libaudit1 1:2.8.5-2ubuntu6
- ubuntu/libblas3 3.9.0-1build1
- ubuntu/libblkid1 2.34-0.1ubuntu9.4
- ubuntu/libboost-dev 1.71.0.0ubuntu2
- ubuntu/libboost1.71-dev 1.71.0-6ubuntu6
- ubuntu/libbrotli1 1.0.7-6ubuntu0.1
- ubuntu/libbsd0 0.10.0-1
- ubuntu/libbz2-1.0 1.0.8-2
- ubuntu/libc-bin 2.31-0ubuntu9.9
- ubuntu/libc-dev-bin 2.31-0ubuntu9.9
- ubuntu/libc6-dev 2.31-0ubuntu9.9
- ubuntu/libc6 2.31-0ubuntu9.9
- ubuntu/libcairo2 1.16.0-4ubuntu1
- ubuntu/libcap-ng0 0.7.9-2.1build1
- ubuntu/libcilkrts5 7.5.0-6ubuntu2
- ubuntu/libcom-err2 1.45.5-2ubuntu1.1
- ubuntu/libcrypt-dev 1:4.4.10-10ubuntu4
- ubuntu/libcrypt1 1:4.4.10-10ubuntu4
- ubuntu/libcurl3-gnutls 7.68.0-1ubuntu2.18
- ubuntu/libcurl4 7.68.0-1ubuntu2.18
- ubuntu/libdatrie1 0.2.12-3
- ubuntu/libdb5.3 5.3.28 dfsg1-0.6ubuntu2
- ubuntu/libdebconfclient0 0.251ubuntu1
- ubuntu/libdeflate0 1.5-3
- ubuntu/libexpat1 2.2.9-1ubuntu0.6
- ubuntu/libext2fs2 1.45.5-2ubuntu1.1
- ubuntu/libfdisk1 2.34-0.1ubuntu9.4
- ubuntu/libffi7 3.3-4
- ubuntu/libfontconfig1 2.13.1-2ubuntu3
- ubuntu/libfreetype6 2.10.1-2ubuntu0.3
- ubuntu/libfribidi0 1.0.8-2ubuntu0.1
- ubuntu/libgcc-7-dev 7.5.0-6ubuntu2
- ubuntu/libgcc-s1 10.3.0-1ubuntu1~20.04
- ubuntu/libgcrypt20 1.8.5-5ubuntu1.1
- ubuntu/libgfortran5 10.3.0-1ubuntu1~20.04
- ubuntu/libglib2.0-0 2.64.6-1~ubuntu20.04.6
- ubuntu/libgmp10 2:6.2.0 dfsg-4ubuntu0.1
- ubuntu/libgnutls30 3.6.13-2ubuntu1.8
- ubuntu/libgomp1 10.3.0-1ubuntu1~20.04
- ubuntu/libgpg-error0 1.37-1
- ubuntu/libgraphite2-3 1.3.13-11build1
- ubuntu/libgssapi-krb5-2 1.17-6ubuntu4.3
- ubuntu/libgssapi3-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libharfbuzz0b 2.6.4-1ubuntu4.2
- ubuntu/libhcrypto4-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libheimbase1-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libheimntlm0-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libhogweed5 3.5.1 really3.5.1-2ubuntu0.2
- ubuntu/libhts3 1.10.2-3ubuntu0.1
- ubuntu/libhx509-5-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libice6 2:1.0.10-0ubuntu1
- ubuntu/libicu66 66.1-2ubuntu2.1
- ubuntu/libidn2-0 2.2.0-2
- ubuntu/libitm1 10.3.0-1ubuntu1~20.04
- ubuntu/libjbig0 2.1-3.1ubuntu0.20.04.1
- ubuntu/libjpeg-turbo8 2.0.3-0ubuntu1.20.04.3
- ubuntu/libjpeg8 8c-2ubuntu8
- ubuntu/libk5crypto3 1.17-6ubuntu4.3
- ubuntu/libkeyutils1 1.6-6ubuntu1.1
- ubuntu/libkrb5-26-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libkrb5-3 1.17-6ubuntu4.3
- ubuntu/libkrb5support0 1.17-6ubuntu4.3
- ubuntu/liblapack3 3.9.0-1build1
- ubuntu/libldap-2.4-2 2.4.49 dfsg-2ubuntu1.9
- ubuntu/libldap-common 2.4.49 dfsg-2ubuntu1.9
- ubuntu/liblsan0 10.3.0-1ubuntu1~20.04
- ubuntu/liblz4-1 1.9.2-2ubuntu0.20.04.1
- ubuntu/liblzma5 5.2.4-1ubuntu1.1
- ubuntu/libmount1 2.34-0.1ubuntu9.4
- ubuntu/libmpx2 8.4.0-3ubuntu2
- ubuntu/libncurses6 6.2-0ubuntu2.1
- ubuntu/libncursesw6 6.2-0ubuntu2.1
- ubuntu/libnettle7 3.5.1 really3.5.1-2ubuntu0.2
- ubuntu/libnghttp2-14 1.40.0-1ubuntu0.1
- ubuntu/libp11-kit0 0.23.20-1ubuntu0.1
- ubuntu/libpam-modules-bin 1.3.1-5ubuntu4.6
- ubuntu/libpam-modules 1.3.1-5ubuntu4.6
- ubuntu/libpam-runtime 1.3.1-5ubuntu4.6
- ubuntu/libpam0g 1.3.1-5ubuntu4.6
- ubuntu/libpango-1.0-0 1.44.7-2ubuntu4
- ubuntu/libpangocairo-1.0-0 1.44.7-2ubuntu4
- ubuntu/libpangoft2-1.0-0 1.44.7-2ubuntu4
- ubuntu/libpaper-utils 1.1.28
- ubuntu/libpaper1 1.1.28
- ubuntu/libpcre2-8-0 10.34-7ubuntu0.1
- ubuntu/libpcre3 2:8.39-12ubuntu0.1
- ubuntu/libpixman-1-0 0.38.4-0ubuntu2.1
- ubuntu/libpng16-16 1.6.37-2
- ubuntu/libprocps8 2:3.3.16-1ubuntu2.3
- ubuntu/libpsl5 0.21.0-1ubuntu1
- ubuntu/libquadmath0 10.3.0-1ubuntu1~20.04
- ubuntu/libreadline8 8.0-4
- ubuntu/libroken18-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-2build1
- ubuntu/libsasl2-2 2.1.27 dfsg-2ubuntu0.1
- ubuntu/libsasl2-modules-db 2.1.27 dfsg-2ubuntu0.1
- ubuntu/libseccomp2 2.5.1-1ubuntu1~20.04.2
- ubuntu/libselinux1 3.0-1build2
- ubuntu/libsemanage-common 3.0-1build2
- ubuntu/libsemanage1 3.0-1build2
- ubuntu/libsepol1 3.0-1ubuntu0.1
- ubuntu/libsm6 2:1.2.3-1
- ubuntu/libsmartcols1 2.34-0.1ubuntu9.4
- ubuntu/libsqlite3-0 3.31.1-4ubuntu0.5
- ubuntu/libss2 1.45.5-2ubuntu1.1
- ubuntu/libssh-4 0.9.3-2ubuntu2.3
- ubuntu/libssl1.1 1.1.1f-1ubuntu2.19
- ubuntu/libstdc -7-dev 7.5.0-6ubuntu2
- ubuntu/libstdc 6 10.3.0-1ubuntu1~20.04
- ubuntu/libsystemd0 245.4-4ubuntu3.22
- ubuntu/libtasn1-6 4.16.0-2
- ubuntu/libtcl8.6 8.6.10 dfsg-1
- ubuntu/libthai-data 0.1.28-3
- ubuntu/libthai0 0.1.28-3
- ubuntu/libtiff5 4.1.0 git191117-2ubuntu0.20.04.8
- ubuntu/libtinfo6 6.2-0ubuntu2.1
- ubuntu/libtk8.6 8.6.10-1
- ubuntu/libtsan0 10.3.0-1ubuntu1~20.04
- ubuntu/libubsan0 7.5.0-6ubuntu2
- ubuntu/libudev1 245.4-4ubuntu3.22
- ubuntu/libunistring2 0.9.10-2
- ubuntu/libuuid1 2.34-0.1ubuntu9.4
- ubuntu/libwebp6 0.6.1-2ubuntu0.20.04.2
- ubuntu/libwind0-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libx11-6 2:1.6.9-2ubuntu1.5
- ubuntu/libx11-data 2:1.6.9-2ubuntu1.5
- ubuntu/libxau6 1:1.0.9-0ubuntu1
- ubuntu/libxcb-render0 1.14-2
- ubuntu/libxcb-shm0 1.14-2
- ubuntu/libxcb1 1.14-2
- ubuntu/libxdmcp6 1:1.1.3-0ubuntu1
- ubuntu/libxext6 2:1.3.4-0ubuntu1
- ubuntu/libxft2 2.3.3-0ubuntu1
- ubuntu/libxml2 2.9.10 dfsg-5ubuntu0.20.04.6
- ubuntu/libxrender1 1:0.9.10-1
- ubuntu/libxss1 1:1.2.3-1
- ubuntu/libxt6 1:1.1.5-1
- ubuntu/libzstd1 1.4.4 dfsg-3ubuntu0.1
- ubuntu/linux-libc-dev 5.4.0-153.170
- ubuntu/login 1:4.8.1-1ubuntu5.20.04.4
- ubuntu/logsave 1.45.5-2ubuntu1.1
- ubuntu/lsb-base 11.1.0ubuntu2
- ubuntu/mawk 1.3.4.20200120-2
- ubuntu/mount 2.34-0.1ubuntu9.4
- ubuntu/ncurses-base 6.2-0ubuntu2.1
- ubuntu/ncurses-bin 6.2-0ubuntu2.1
- ubuntu/openssl 1.1.1f-1ubuntu2.19
- ubuntu/passwd 1:4.8.1-1ubuntu5.20.04.4
- ubuntu/perl-base 5.30.0-9ubuntu0.4
- ubuntu/procps 2:3.3.16-1ubuntu2.3
- ubuntu/r-base-core 3.6.3-2
- ubuntu/r-base 3.6.3-2
- ubuntu/r-bioc-biobase 2.46.0-1
- ubuntu/r-bioc-biocgenerics 0.32.0-1
- ubuntu/r-bioc-biocparallel 1.20.1-1build1
- ubuntu/r-bioc-biostrings 2.54.0-1
- ubuntu/r-bioc-delayedarray 0.12.2 dfsg-1
- ubuntu/r-bioc-genomeinfodb 1.22.0-1
- ubuntu/r-bioc-genomeinfodbdata 1.2.2-1
- ubuntu/r-bioc-genomicalignments 1.22.1-1
- ubuntu/r-bioc-genomicranges 1.38.0 dfsg-1
- ubuntu/r-bioc-iranges 2.20.2-1
- ubuntu/r-bioc-rhtslib 1.18.1 dfsg-1
- ubuntu/r-bioc-rsamtools 2.2.3-1
- ubuntu/r-bioc-s4vectors 0.24.3-1
- ubuntu/r-bioc-summarizedexperiment 1.16.1 dfsg-1
- ubuntu/r-bioc-xvector 0.26.0-1
- ubuntu/r-bioc-zlibbioc 1.32.0 dfsg-1
- ubuntu/r-cran-bh 1.66.0-1
- ubuntu/r-cran-bitops 1.0-6-4
- ubuntu/r-cran-boot 1.3-24-2
- ubuntu/r-cran-circlize 0.4.8-1
- ubuntu/r-cran-class 7.3-15-1
- ubuntu/r-cran-cluster 2.1.0-2
- ubuntu/r-cran-codetools 0.2-16-1
- ubuntu/r-cran-colorspace 1.4-1 dfsg-1
- ubuntu/r-cran-foreign 0.8.75-1
- ubuntu/r-cran-formatr 1.7-1
- ubuntu/r-cran-futile.logger 1.4.3-3
- ubuntu/r-cran-futile.options 1.0.1-2
- ubuntu/r-cran-globaloptions 0.1.1-1
- ubuntu/r-cran-kernsmooth 2.23-16-1 1
- ubuntu/r-cran-lambda.r 1.2.4-1
- ubuntu/r-cran-lattice 0.20-40-1
- ubuntu/r-cran-mass 7.3-51.5-2
- ubuntu/r-cran-matrix 1.2-18-1
- ubuntu/r-cran-matrixstats 0.55.0-1
- ubuntu/r-cran-mgcv 1.8-31-1
- ubuntu/r-cran-nlme 3.1.144-1
- ubuntu/r-cran-nnet 7.3-13-1
- ubuntu/r-cran-rcurl 1.98-1.1-1
- ubuntu/r-cran-rpart 4.1-15-2
- ubuntu/r-cran-shape 1.4.4-2
- ubuntu/r-cran-snow 1:0.4.3-1
- ubuntu/r-cran-spatial 7.3-11-2build2
- ubuntu/r-cran-survival 3.1-8-1
- ubuntu/r-recommended 3.6.3-2
- ubuntu/readline-common 8.0-4
- ubuntu/samtools 1.10-3
- ubuntu/sed 4.7-1
- ubuntu/sensible-utils 0.0.12 nmu1
- ubuntu/sysvinit-utils 2.96-2.1ubuntu1
- ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.3
- ubuntu/tzdata 2023c-0ubuntu0.20.04.2
- ubuntu/ubuntu-keyring 2020.02.11.4
- ubuntu/ucf 3.0038 nmu1
- ubuntu/unzip 6.0-25ubuntu1.1
- ubuntu/util-linux 2.34-0.1ubuntu9.4
- ubuntu/wget 1.20.3-1ubuntu2
- ubuntu/x11-common 1:7.7 19ubuntu14
- ubuntu/xdg-utils 1.1.3-2ubuntu1.20.04.2
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.5
- ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5
- bash 5.0.17