Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

Package Usage : deb : ubuntu/libhts3

Explore the latest package usage data for ubuntu/libhts3 in the deb ecosystem, including detailed information on package dependencies and their usage.

Total dependents: 116
Total downloads: 32,283,172

More details on packages.ecosyste.ms - JSON

broadinstitute/gatk 4.5.0.0

Official release repository for GATK versions 4.x

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: 11 months ago - 31,988,536 downloads - 912 dependencies
broadinstitute/terra-jupyter-aou 8bf6b13

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 92,816 downloads - 4,112 dependencies
broadinstitute/gatk-nightly 2024-01-06-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT

Official repository for nightly development builds of the GATK

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: 11 months ago - 86,066 downloads - 912 dependencies
intelliseqngs/task_phasing-eagle 3.0.1-chrY-and-the-rest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 8,859 downloads - 235 dependencies
ctomlins/winnowmap latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 3 years ago - 6,203 downloads - 401 dependencies
biocontainers/oncocnv v7.0_cv2

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 12,111 downloads - 307 dependencies
intelliseqngs/igv 3.0.3

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 2,797 downloads - 509 dependencies
intelliseqngs/task_vcf-uniq 1.0.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 4 years ago - 2,118 downloads - 806 dependencies
intelliseqngs/mobigen-models 5.3.4

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 1,007 downloads - 361 dependencies
intelliseqngs/task_imputing-ldproxy 0.1.0-chrY-and-the-rest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 734 downloads - 235 dependencies
intelliseqngs/task_gtc-to-vcf-grch38-no-alt 1.1.0

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 1,238 downloads - 568 dependencies
qdidiscoveryservices/sentieon_omicsoft 202010.03

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 3 years ago - 408 downloads - 283 dependencies
anand7899/alignment-tools latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 399 downloads - 218 dependencies
chrisamiller/nanopack-flair v1.5-7

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 328 downloads - 372 dependencies
gmacari/genomicutils latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 549 downloads - 520 dependencies
hoonbiolab/aasuite v0.1477.3

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 146 downloads - 681 dependencies
alexwaldrop/reads2variants v0.0

  • version: 1.13 ds-2build2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.10
Latest release: almost 2 years ago - 90 downloads - 660 dependencies
tipsarin/rstudio 4.1.3viraltrack

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 54 downloads - 981 dependencies
mqmnd/samtools arm-1.13

  • version: 1.13 ds-2build1
  • arch: arm64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 80 downloads - 120 dependencies
intelliseqngs/task_gtc-to-vcf 1.1.0

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 35 downloads - 635 dependencies
tercen/tracer_docker_operator latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 37 downloads - 826 dependencies
tercen/tracer_docker_operator_base 1.0.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 36 downloads - 812 dependencies
ctomlins/score latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 33 downloads - 799 dependencies
intelliseqngs/task_phasing-eagle-without-ref-data 3.0.1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 33 downloads - 256 dependencies
dhspence/docker-mocha latest

  • version: 1.10.2-5
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.10
Latest release: over 3 years ago - 27 downloads - 433 dependencies
intelliseqngs/prodia_task_mobigen-models 1.1.4

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 115 downloads - 416 dependencies
intelliseqngs/prodia_task_gtc-to-vcf-grch38-no-alt 1.0.4

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 41 downloads - 635 dependencies
prangannath/rna_seq latest

Container for EvolOMICS RNA_Seq pipeline

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 26 downloads - 1,382 dependencies
nciccbr/ccrgb_hlaminer v2

  • version: 1.10.2-3, 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 96 downloads - 713 dependencies
dhspence/docker-annotsv latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 3 years ago - 21 downloads - 563 dependencies
ctomlins/nanopore-rna-pipeline latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 3 years ago - 21 downloads - 717 dependencies
avneeshbt/braker_sep062022 latest

Braker with Augustus

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 18 downloads - 719 dependencies
alexwaldrop/freyja v1.3.11

  • version: 1.13 ds-2build2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.10
Latest release: almost 2 years ago - 19 downloads - 376 dependencies
tercen/tracer_summarize_docker_operator latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 15 downloads - 760 dependencies
nahyunkong/mito v6

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 11,361 downloads - 2,488 dependencies
docker4sheng/workflow latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 15 downloads - 1,519 dependencies
souckmi/arriba 1.7

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 81 downloads - 310 dependencies
raveancic/typester latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 15 downloads - 280 dependencies
mrkevindc/sashimi latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 14 downloads - 360 dependencies
mqmnd/leafcutter amd

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 15 downloads - 624 dependencies
wilfriedguiblet/isomir v0.3

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 180 downloads - 1,657 dependencies
milescsmith/falco 1.2.1b

  • version: 1.13 ds-2build2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.10
Latest release: almost 2 years ago - 14 downloads - 318 dependencies
pedrojf/annotsv 3.2.3

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 197 downloads - 356 dependencies
nciccbr/ccrgb_annovar v1.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 127 downloads - 854 dependencies
bsceapm/ahatool 2.2

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 17 downloads - 40 dependencies
iamh2o/octosky 3

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 13 downloads - 1,588 dependencies
sagnikbanerjee15/nucleotide_selection_study 0.0.1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 2 years ago - 12 downloads - 784 dependencies
prosyslab/bug-bench-segemehl 20210806

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 3 years ago - 12 downloads - 264 dependencies
mjinkm/mtrfind latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 13 downloads - 255 dependencies
jieliu4wustl/wustl v0.1_20230907

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 1 year ago - 4,483 downloads - 1,124 dependencies
meredith705/gfase_hargs latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 15 downloads - 321 dependencies
hoonbiolab/genepattern_aa v19.1

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 6 downloads - 628 dependencies
bioinforpi/nxf-bsbolt v0.0.1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 8 downloads - 338 dependencies
cloxd/decontaminer 1.4

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 9 downloads - 199 dependencies
ctomlins/bash latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 2 years ago - 7 downloads - 400 dependencies
zingoo/rna_bench baruzzo-docker-v0.1

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 9 downloads - 272 dependencies
hoonbiolab/hmftools_sv v.2.13.2

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 9 downloads - 856 dependencies
jordanwhitlock/setbp1_manuscript_panda_1.0.1 latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 35 downloads - 1,720 dependencies
bsaintjo/dimelo cuda1200

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 9 downloads - 362 dependencies
sgiorgetti/api-build release-109-56

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 8 downloads - 399 dependencies
medicinalgenomics/star latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 9 downloads - 168 dependencies
mfsentma/rna latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 7 downloads - 807 dependencies
bioxfu/ddngs latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 10 downloads - 1,055 dependencies
kuowenhsi/wen_omnic 1.2

Dovetail Omni-C pipeline

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 13 downloads - 374 dependencies
gailr/bamsurgeon-42123 latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 9 downloads - 432 dependencies
streptomyces/reciblast latest

Reciprocal blastp for Ainsley

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 10 downloads - 754 dependencies
thesushantpatil/arriba_v2.4.0_threads32_amd64 latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 10 downloads - 310 dependencies
amcooksey/nal_rna_seq_annotation_pipeline testing

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 10 downloads - 865 dependencies
loukaszagkoslcpuk/lcphaomicsplink latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: about 1 year ago - 350 downloads - 691 dependencies
mattiaficarellilcpuk/lcphaomicsbioinfotools latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: about 1 year ago - 9 downloads - 727 dependencies
qtulab/miniencode latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: about 1 year ago - 56 downloads - 4,269 dependencies
nrminor/lowov-wgs v1.5

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 6 downloads - 1,524 dependencies
mmastert4/metamdbg 7ce646a

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 8 downloads - 258 dependencies
skchronicles/flair v0.1.0

Docker image for FLAIR: Full-Length Alternative Isoform analysis of RNA

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 9 downloads - 729 dependencies
lsglh/txch_dup latest

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 6 downloads - 186 dependencies
elle72/basic vszt

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: about 1 year ago - 45,197 downloads - 397 dependencies
ashedpotatoes/clockwork-plus v0.11.3.11-CDC

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: 11 months ago - 4,081 downloads - 1,500 dependencies
hailgenetics/vep-grch37-85 0.2.127

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: 10 months ago - 1,780 downloads - 367 dependencies
babessell/strling-unofficial main

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 7,235 downloads - 266 dependencies
miramastoras/merqury latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 412 downloads - 647 dependencies
alesmaver/scramble2 latest

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 478 downloads - 1,116 dependencies
cgrlab/glnexus cvss

  • version: 1.16 ds-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-23.04
Latest release: over 1 year ago - 617 downloads - 126 dependencies
ekhowell/smcpp_copy entrypoint_test

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 197 downloads - 230 dependencies
ilariap/r_cnmops_exomedepth latest

Docker container containing panel-cnMops, cnMops and Exomedepth

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 195 downloads - 730 dependencies
sridnona/igv_reports v1.7.0

  • version: 1.10.2-3ubuntu0.1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: almost 2 years ago - 173 downloads - 371 dependencies
eppicenter/mad4hatter latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: almost 2 years ago - 191 downloads - 739 dependencies
salvacasani/bwa latest

  • version: 1.13 ds-2build1
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.04
Latest release: over 1 year ago - 123 downloads - 235 dependencies
harrisonjg/freyja v.1.4.7

  • version: 1.13 ds-2build2
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-22.10
Latest release: about 1 year ago - 125 downloads - 501 dependencies
cgrlab/intervar v2.2.1

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 171 downloads - 857 dependencies
nciccbr/ccbr_ngsderive v1.0

  • version: 1.10.2-3
  • arch: amd64
  • upstream: htslib
  • distro: ubuntu-20.04
Latest release: over 1 year ago - 103 downloads - 862 dependencies