broadinstitute/gatk-dev : NVSCOREVARIANTS-PREVIEW-SNAPSHOT
GATK Development
Latest release: almost 3 years ago - 6,982 downloads - 752 dependencies
JSONDependencies
- ubuntu/adduser 3.116ubuntu1
- ubuntu/adwaita-icon-theme 3.28.0-1ubuntu1
- ubuntu/apt 1.6.12
- ubuntu/base-files 10.1ubuntu2.8
- ubuntu/base-passwd 3.5.44
- ubuntu/bash 4.4.18-2ubuntu1.2
- ubuntu/bc 1.07.1-2
- ubuntu/bedtools 2.26.0 dfsg-5
- ubuntu/binutils-common 2.30-21ubuntu1~18.04.2
- ubuntu/binutils-x86-64-linux-gnu 2.30-21ubuntu1~18.04.2
- ubuntu/binutils 2.30-21ubuntu1~18.04.2
- ubuntu/bsdutils 1:2.31.1-0.4ubuntu3.5
- ubuntu/build-essential 12.4ubuntu1
- ubuntu/bzip2 1.0.6-8.1ubuntu0.2
- ubuntu/ca-certificates-java 20180516ubuntu1~18.04.1
- ubuntu/ca-certificates 20180409
- ubuntu/coreutils 8.28-1ubuntu1
- ubuntu/cpp-7 7.5.0-3ubuntu1~18.04
- ubuntu/cpp 4:7.4.0-1ubuntu2.3
- ubuntu/curl 7.58.0-2ubuntu3.8
- ubuntu/dash 0.5.8-2.10
- ubuntu/debconf 1.5.66ubuntu1
- ubuntu/debianutils 4.8.4
- ubuntu/diffutils 1:3.6-1
- ubuntu/distro-info-data 0.37ubuntu0.6
- ubuntu/dpkg-dev 1.19.0.5ubuntu2.3
- ubuntu/dpkg 1.19.0.5ubuntu2.3
- ubuntu/e2fsprogs 1.44.1-1ubuntu1.3
- ubuntu/fdisk 2.31.1-0.4ubuntu3.5
- ubuntu/findutils 4.6.0 git 20170828-2
- ubuntu/fontconfig-config 2.12.6-0ubuntu2
- ubuntu/fontconfig 2.12.6-0ubuntu2
- ubuntu/fonts-dejavu-core 2.37-1
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- ubuntu/g 4:7.4.0-1ubuntu2.3
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- ubuntu/gcc-8-base 8.3.0-26ubuntu1~18.04
- ubuntu/gcc 4:7.4.0-1ubuntu2.3
- ubuntu/gir1.2-glib-2.0 1.56.1-1
- ubuntu/google-cloud-sdk 284.0.0-0
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- ubuntu/gpg 2.2.4-1ubuntu1.2
- ubuntu/gpgconf 2.2.4-1ubuntu1.2
- ubuntu/gpgv 2.2.4-1ubuntu1.2
- ubuntu/grep 3.1-2build1
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- ubuntu/init-system-helpers 1.51
- ubuntu/iso-codes 3.79-1
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- ubuntu/less 487-0.1
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- ubuntu/libatk-wrapper-java 0.33.3-20ubuntu0.1
- ubuntu/libatk1.0-0 2.28.1-1
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- US_export_policy:US_export_policy *
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- charsets:charsets *
- cldrdata:cldrdata *
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- com.google.cloud:google-cloud-bigquery 2.9.0
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- com.google.cloud:google-cloud-nio 0.123.25
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- com.google.code.findbugs:jsr305 3.0.2
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- com.google.http-client:google-http-client-apache-v2 1.41.4
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- com.google.re2j:re2j 1.1
- com.googlecode.json-simple:json-simple 1.1.1
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- dnsns:dnsns *
- dt:dt *
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- icedtea-sound:icedtea-sound *
- io.airlift:aircompressor 0.10
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- io.dropwizard.metrics:metrics-json 3.1.5
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- jaccess:jaccess *
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- javax.xml.bind:jaxb-api 2.2.11
- jconsole:jconsole *
- jline:jline 0.9.94
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- jsse:jsse 1.8.0_242
- local_policy:local_policy *
- localedata:localedata *
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- management-agent:management-agent *
- nashorn:nashorn 1.8.0_242-8u242-b08-0ubuntu3~18.04-b08
- net.grey-panther:natural-comparator 1.1
- net.minidev:accessors-smart 1.2
- net.minidev:json-smart 2.3
- net.razorvine:pyrolite 4.13
- net.sf.jopt-simple:jopt-simple 5.0.3
- net.sf.opencsv:opencsv 2.3
- net.sf.py4j:py4j 0.10.7
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.aeonbits.owner:owner 1.0.9
- org.antlr:antlr4-runtime 4.6
- org.antlr:antlr4-runtime 4.7
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- org.apache.arrow:arrow-vector 0.10.0
- org.apache.avro:avro-guava-dependencies 1.8.2
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- org.apache.kerby:kerby-asn1 1.0.1
- org.apache.kerby:kerby-config 1.0.1
- org.apache.kerby:kerby-pkix 1.0.1
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- org.apache.kerby:kerby-xdr 1.0.1
- org.apache.kerby:token-provider 1.0.1
- org.apache.logging.log4j:log4j-api 2.17.1
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- org.apache.logging.log4j:log4j-jcl 2.17.1
- org.apache.maven.scm:maven-scm-api 1.4
- org.apache.maven.scm:maven-scm-provider-svn-commons 1.4
- org.apache.maven.scm:maven-scm-provider-svnexe 1.4
- org.apache.orc:orc-core 1.5.5
- org.apache.orc:orc-mapreduce 1.5.5
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- org.apache.parquet:parquet-avro 1.10.1
- org.apache.parquet:parquet-column 1.10.1
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- org.apache.spark:spark-mllib-local_2.11 2.4.5
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- org.apache.spark:spark-network-shuffle_2.11 2.4.5
- org.apache.spark:spark-sketch_2.11 2.4.5
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- org.apache.spark:spark-streaming_2.11 2.4.5
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- org.apache.spark:spark-unsafe_2.11 2.4.5
- org.apache.xbean:xbean-asm-util 4.8
- org.apache.xbean:xbean-asm6-shaded 4.8
- org.apache.yetus:audience-annotations 0.5.0
- org.bdgenomics.adam:adam-codegen-spark2_2.11 0.28.0
- org.bdgenomics.adam:adam-core-spark2_2.11 0.28.0
- org.bdgenomics.bdg-formats:bdg-formats 0.13.0
- org.bdgenomics.utils:utils-cli-spark2_2.11 0.2.15
- org.bdgenomics.utils:utils-intervalrdd-spark2_2.11 0.2.15
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- org.bdgenomics.utils:utils-metrics-spark2_2.11 0.2.15
- org.bdgenomics.utils:utils-misc-spark2_2.11 0.2.15
- org.broadinstitute.hellbender.Main:gatk-package-NVSCOREVARIANTS-PREVIEW-SNAPSHOT-local NVSCOREVARIANTS-PREVIEW-SNAPSHOT
- org.broadinstitute.hellbender.Main:gatk-package-NVSCOREVARIANTS-PREVIEW-SNAPSHOT-spark NVSCOREVARIANTS-PREVIEW-SNAPSHOT
- org.codehaus.janino:commons-compiler 3.0.9
- org.codehaus.janino:janino 3.0.9
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- org.debian.security.UpdateCertificates:ca-certificates-java *
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- tools:tools *
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