Ecosyste.ms: Docker

An open API service providing dependency metadata for docker images.

hremon331046/neoantigen-vaccine-pipeline : d0.4.2-strelka-v2-test-1.2

Ubuntu 16.04.7 LTS

Latest release: 12 months ago - 96 downloads - 436 dependencies

JSON

Dependencies

bash 4.3.48
java 1.8.0_382-b05
python 2.7.12
python 3.11.4
python 3.5.2
python 3.6.10
python 3.7.12

cloud.google.com/go v0.99.0
github.com/Azure/go-autorest/autorest/adal v0.9.15
github.com/Azure/go-autorest/autorest/date v0.3.0
github.com/Azure/go-autorest/autorest v0.11.20
github.com/Azure/go-autorest/logger v0.2.1
github.com/Azure/go-autorest/tracing v0.6.0
github.com/BurntSushi/toml v0.4.1
github.com/MakeNowJust/heredoc v0.0.0-20170808103936-bb23615498cd
github.com/Masterminds/goutils v1.1.1
github.com/Masterminds/semver/v3 v3.1.1
github.com/Masterminds/sprig/v3 v3.2.2
github.com/Masterminds/squirrel v1.5.2
github.com/Masterminds/vcs v1.13.3
github.com/PuerkitoBio/purell v1.1.1
github.com/PuerkitoBio/urlesc v0.0.0-20170810143723-de5bf2ad4578
github.com/asaskevich/govalidator v0.0.0-20200428143746-21a406dcc535
github.com/beorn7/perks v1.0.1
github.com/cespare/xxhash/v2 v2.1.2
github.com/chai2010/gettext-go v0.0.0-20160711120539-c6fed771bfd5
github.com/containerd/containerd v1.6.1
github.com/cpuguy83/go-md2man/v2 v2.0.1
github.com/cyphar/filepath-securejoin v0.2.3
github.com/davecgh/go-spew v1.1.1
github.com/docker/cli v20.10.11 incompatible
github.com/docker/distribution v2.7.1 incompatible
github.com/docker/docker-credential-helpers v0.6.4
github.com/docker/docker v20.10.12 incompatible
github.com/docker/go-connections v0.4.0
github.com/docker/go-metrics v0.0.1
github.com/docker/go-units v0.4.0
github.com/evanphx/json-patch v4.12.0 incompatible
github.com/exponent-io/jsonpath v0.0.0-20151013193312-d6023ce2651d
github.com/fatih/color v1.13.0
github.com/go-errors/errors v1.0.1
github.com/go-logr/logr v1.2.2
github.com/go-openapi/jsonpointer v0.19.5
github.com/go-openapi/jsonreference v0.19.5
github.com/go-openapi/swag v0.19.14
github.com/gobwas/glob v0.2.3
github.com/gofrs/flock v0.8.1
github.com/gogo/protobuf v1.3.2
github.com/golang-jwt/jwt/v4 v4.0.0
github.com/golang/protobuf v1.5.2
github.com/google/btree v1.0.1
github.com/google/go-cmp v0.5.6
github.com/google/gofuzz v1.2.0
github.com/google/shlex v0.0.0-20191202100458-e7afc7fbc510
github.com/google/uuid v1.2.0
github.com/googleapis/gnostic v0.5.5
github.com/gorilla/mux v1.8.0
github.com/gosuri/uitable v0.0.4
github.com/gregjones/httpcache v0.0.0-20180305231024-9cad4c3443a7
github.com/huandu/xstrings v1.3.2
github.com/imdario/mergo v0.3.12
github.com/jmoiron/sqlx v1.3.4
github.com/josharian/intern v1.0.0
github.com/json-iterator/go v1.1.12
github.com/klauspost/compress v1.13.6
github.com/lann/builder v0.0.0-20180802200727-47ae307949d0
github.com/lann/ps v0.0.0-20150810152359-62de8c46ede0
github.com/lib/pq v1.10.4
github.com/liggitt/tabwriter v0.0.0-20181228230101-89fcab3d43de
github.com/mailru/easyjson v0.7.6
github.com/mattn/go-colorable v0.1.12
github.com/mattn/go-isatty v0.0.14
github.com/mattn/go-runewidth v0.0.9
github.com/matttproud/golang_protobuf_extensions v1.0.2-0.20181231171920-c182affec369
github.com/mitchellh/copystructure v1.2.0
github.com/mitchellh/go-wordwrap v1.0.0
github.com/mitchellh/reflectwalk v1.0.2
github.com/moby/locker v1.0.1
github.com/moby/spdystream v0.2.0
github.com/moby/term v0.0.0-20210610120745-9d4ed1856297
github.com/modern-go/concurrent v0.0.0-20180306012644-bacd9c7ef1dd
github.com/modern-go/reflect2 v1.0.2
github.com/monochromegane/go-gitignore v0.0.0-20200626010858-205db1a8cc00
github.com/morikuni/aec v1.0.0
github.com/opencontainers/go-digest v1.0.0
github.com/opencontainers/image-spec v1.0.2
github.com/peterbourgon/diskv v2.0.1 incompatible
github.com/pkg/errors v0.9.1
github.com/pmezard/go-difflib v1.0.0
github.com/prometheus/client_golang v1.11.0
github.com/prometheus/client_model v0.2.0
github.com/prometheus/common v0.30.0
github.com/prometheus/procfs v0.7.3
github.com/rubenv/sql-migrate v0.0.0-20210614095031-55d5740dbbcc
github.com/russross/blackfriday/v2 v2.1.0
github.com/russross/blackfriday v1.5.2
github.com/shopspring/decimal v1.2.0
github.com/sirupsen/logrus v1.8.1
github.com/spf13/cast v1.4.1
github.com/spf13/cobra v1.3.0
github.com/spf13/pflag v1.0.5
github.com/stretchr/testify v1.7.0
github.com/xeipuuv/gojsonpointer v0.0.0-20180127040702-4e3ac2762d5f
github.com/xeipuuv/gojsonreference v0.0.0-20180127040603-bd5ef7bd5415
github.com/xeipuuv/gojsonschema v1.2.0
github.com/xlab/treeprint v0.0.0-20181112141820-a009c3971eca
go.starlark.net v0.0.0-20200306205701-8dd3e2ee1dd5
golang.org/x/crypto v0.0.0-20211117183948-ae814b36b871
golang.org/x/net v0.0.0-20220107192237-5cfca573fb4d
golang.org/x/oauth2 v0.0.0-20211104180415-d3ed0bb246c8
golang.org/x/sync v0.0.0-20210220032951-036812b2e83c
golang.org/x/sys v0.0.0-20211216021012-1d35b9e2eb4e
golang.org/x/term v0.0.0-20210927222741-03fcf44c2211
golang.org/x/text v0.3.7
golang.org/x/time v0.0.0-20210723032227-1f47c861a9ac
google.golang.org/genproto v0.0.0-20220107163113-42d7afdf6368
google.golang.org/grpc v1.43.0
google.golang.org/protobuf v1.27.1
gopkg.in/gorp.v1 v1.7.2
gopkg.in/inf.v0 v0.9.1
gopkg.in/yaml.v2 v2.4.0
gopkg.in/yaml.v3 v3.0.0-20210107192922-496545a6307b
helm.sh/helm/v3 (devel)
helm.sh/helm 3.8.2
k8s.io/api v0.23.5
k8s.io/apiextensions-apiserver v0.23.5
k8s.io/apimachinery v0.23.5
k8s.io/apiserver v0.23.5
k8s.io/cli-runtime v0.23.5
k8s.io/client-go v0.23.5
k8s.io/component-base v0.23.5
k8s.io/klog/v2 v2.30.0
k8s.io/kube-openapi v0.0.0-20211115234752-e816edb12b65
k8s.io/kubectl v0.23.5
k8s.io/utils v0.0.0-20211116205334-6203023598ed
oras.land/oras-go v1.1.1
sigs.k8s.io/json v0.0.0-20211020170558-c049b76a60c6
sigs.k8s.io/kustomize/api v0.10.1
sigs.k8s.io/kustomize/kyaml v0.13.0
sigs.k8s.io/structured-merge-diff/v4 v4.2.1
sigs.k8s.io/yaml v1.3.0
stdlib 1.17.5

US_export_policy:US_export_policy *
cat:cat 1.8.0_382
charsets:charsets *
cisd-jhdf5:cisd-jhdf5 *
cldrdata:cldrdata *
com.google.guava:guava 11.0.2
com.google.guava:guava 15.0
com.jamesmurty.utils:java-xmlbuilder 0.4
com.sun:jce 1.7.0
com.sun:jce 1.8.0_382
com.sun:jce 1.8.0_92
com.sun:sunec 1.7.0
com.sun:sunec 1.8.0_382
com.sun:sunec 1.8.0_92
com.sun:sunjce_provider 1.7.0
com.sun:sunjce_provider 1.8.0_382
com.sun:sunjce_provider 1.8.0_92
com.sun:sunpkcs11 1.7.0
com.sun:sunpkcs11 1.8.0_382
com.sun:sunpkcs11 1.8.0_92
commons-collections:commons-collections 3.2.1
commons-collections:commons-collections 3.2.2
commons-io:commons-io 1.4
commons-io:commons-io 2.1
commons-io:commons-io 2.4
commons-lang:commons-lang 2.4
commons-lang:commons-lang 2.5
commons-logging:commons-logging 1.1.1
crs-agent:crs-agent 1.0.32-2116
dnsns:dnsns *
dt:dt *
htsjdk:htsjdk 2.24.1-SNAPSHOT
jaccess:jaccess *
javassist:javassist 3.12.1.GA
javax.mail:mail 1.4.4
jbzip2:jbzip2 0.9
jconsole:jconsole *
jfr:jfr 1.8.0_382
jsse:jsse 1.7.0_91
jsse:jsse 1.8.0_382
jsse:jsse 1.8.0_92
local_policy:local_policy *
localedata:localedata *
log4j:log4j 1.2.15
management-agent:management-agent *
nashorn:nashorn 1.8.0_382-b05
nashorn:nashorn 1.8.0_92-b15
net.sf.jopt-simple:jopt-simple 5.0.3
org.apache.commons:commons-compress 1.4.1
org.apache.commons:commons-jexl 2.1.1
org.apache.commons:commons-lang3 3.4
org.apache.commons:commons-math3 3.5
org.apache.commons:commons-math 2.2
org.apache.httpcomponents:httpclient 4.1.1
org.apache.httpcomponents:httpcore 4.1
org.apache.logging.log4j:log4j-api 2.5
org.apache.logging.log4j:log4j-core 2.5
org.broadinstitute.cga:mutect 1.1.7
org.broadinstitute.gatk.engine.CommandLineGATK:GenomeAnalysisTK *
org.broadinstitute.gatk:gatk-engine 3.7
org.broadinstitute.gatk:gatk-package-distribution 3.7
org.broadinstitute.gatk:gatk-tools-protected 3.7
org.broadinstitute.gatk:gatk-tools-public 3.7
org.broadinstitute.gatk:gatk-utils 3.7
org.broadinstitute.sting:gatk-framework 3.1
org.broadinstitute.sting:gatk-protected 3.1
org.broadinstitute.sting:sting-utils 3.1
org.javassist:javassist 3.16.1-GA
org.reflections:reflections 0.9.8
org.reflections:reflections 0.9.9-RC1
org.simpleframework:simple-xml 2.0.4
org.slf4j:slf4j-api 1.6.1
org.slf4j:slf4j-log4j12 1.6.1
org.slf4j:slf4j-log4j12 1.7.5
org.xerial.snappy:snappy-java 1.0.3-rc3
picard:picard 2.18.5-SNAPSHOT
resources:resources 1.7.0_91
resources:resources 1.8.0_382
resources:resources 1.8.0_92
rt:rt 1.7.0_91
rt:rt 1.8.0_382
rt:rt 1.8.0_92
sa-jdi:sa-jdi *
tools:tools *
us.levk:drmaa-common 1.0
us.levk:drmaa-gridengine 6.2u5
zipfs:zipfs 1.7.0_91
zipfs:zipfs 1.8.0_382
zipfs:zipfs 1.8.0_92

ConfigArgParse 1.5.3
ConfigArgParse 1.7
Cython 0.29.24
Cython 0.29.34
Cython 3.0.2
GitPython 3.1.20
GitPython 3.1.31
Jinja2 3.0.3
Jinja2 3.1.2
Keras-Preprocessing 1.1.2
Markdown 3.4.4
MarkupSafe 2.0.1
MarkupSafe 2.1.2
MarkupSafe 2.1.3
PySocks 1.7.1
PyVCF3 1.0.3
PyVCF 0.6.8
PyYAML 5.4
PyYAML 6.0.1
Werkzeug 2.2.3
XlsxWriter 3.1.0
XlsxWriter 3.1.3
absl-py 1.4.0
appdirs 1.4.4
argparse 1.2.1
astroid 2.15.4
astroid 2.15.6
astropy 4.1
astropy 4.3.1
astropy 5.2.2
astunparse 1.6.3
attrs 22.2.0
attrs 23.1.0
biopython 1.79
biopython 1.81
boltons 23.0.0
brotlipy 0.7.0
cached-property 1.5.2
cachetools 5.3.1
certifi 2022.12.7
certifi 2023.5.7
certifi 2023.7.22
cffi 1.15.1
charset-normalizer 2.0.12
charset-normalizer 2.0.4
charset-normalizer 3.1.0
charset-normalizer 3.2.0
conda-content-trust 0.1.3
conda-libmamba-solver 23.5.0
conda-package-handling 2.1.0
conda 23.5.2
conda_package_streaming 0.8.0
cryptography 39.0.1
datacache 1.2.1
datrie 0.8.2
dill 0.3.6
dill 0.3.7
docutils 0.18.1
docutils 0.19
flask 1.1.1
future 0.18.3
gast 0.3.3
gitdb 4.0.10
gitdb 4.0.9
google-auth-oauthlib 0.4.6
google-auth 2.22.0
google-pasta 0.2.0
grpcio 1.58.0
gtfparse 1.2.0
gtfparse 1.3.0
h5py 2.10.0
idna 3.4
importlib-metadata 4.8.3
importlib-metadata 6.7.0
importlib-resources 5.4.0
isort 5.11.5
isort 5.12.0
isovar 1.1.1
isovar 1.3.0
joblib 1.1.1
joblib 1.2.0
joblib 1.3.2
jsonpatch 1.32
jsonpointer 2.1
jsonschema 4.0.0
jsonschema 4.17.3
lazy-object-proxy 1.9.0
libmambapy 1.4.1
mccabe 0.7.0
memoized-property 1.0.3
mhcflurry 2.0.6
mhcgnomes 1.8.4
mhcgnomes 1.8.6
mhcnames 0.4.8
mhctools 1.8.1
mhctools 1.8.1
mock 5.0.2
mock 5.1.0
mypy 0.770
nose 1.3.7
np-utils 0.6.0
numpy 1.18.5
numpy 1.19.5
numpy 1.24.3
oauthlib 3.2.2
opt-einsum 3.3.0
packaging 23.0
packaging 23.1
pandas 1.1.5
pandas 1.3.5
pandas 2.0.1
pdfkit 1.0.0
pip 19.0.3
pip 22.3.1
pip 23.1.2
pip 23.2.1
platformdirs 3.10.0
platformdirs 3.5.0
pluggy 1.0.0
progressbar33 2.4
protobuf 3.20.3
psutil 5.9.5
pyOpenSSL 23.0.0
pyasn1-modules 0.3.0
pyasn1 0.5.0
pycosat 0.6.4
pycparser 2.21
pyensembl 1.7.3
pyensembl 2.2.9
pyerfa 2.0.0.3
pylint 2.17.3
pylint 2.17.5
pypandoc 1.11
pyrsistent 0.18.0
pyrsistent 0.19.3
pysam 0.21.0
python-dateutil 2.8.2
pytz 2023.3
pytz 2023.3.post1
ratelimiter 1.2.0.post0
requests-oauthlib 1.3.1
requests 2.27.1
requests 2.29.0
requests 2.31.0
roman 3.3
roman 4.0
roman 4.1
rsa 4.9
ruamel.yaml 0.17.21
scikit-learn 0.24.2
scikit-learn 1.0.2
scikit-learn 1.2.2
scipy 1.10.1
scipy 1.4.1
scipy 1.5.4
sercol 0.1.4
serializable 0.2.1
setuptools 57.4.0
setuptools 59.6.0
setuptools 59.8.0
setuptools 65.5.1
setuptools 67.8.0
shellinford 0.4.1
simplejson 3.19.1
six 1.16.0
smmap 5.0.0
snakemake 5.4.4
tensorboard-data-server 0.6.1
tensorboard-plugin-wit 1.8.1
tensorboard 2.11.2
tensorflow-cpu 2.3.0
tensorflow-estimator 2.3.0
termcolor 2.3.0
threadpoolctl 3.1.0
tinytimer 0.0.0
tomli 2.0.1
tomlkit 0.11.8
tomlkit 0.12.1
toolz 0.12.0
tqdm 4.64.1
tqdm 4.65.0
tqdm 4.66.1
typechecks 0.1.0
typed-ast 1.5.5
typing_extensions 4.1.1
typing_extensions 4.5.0
typing_extensions 4.7.1
tzdata 2023.3
urllib3 1.26.15
urllib3 1.26.16
varcode 0.8.0
varcode 1.1.0
vaxrank 1.4.0
vaxrank 1.4.0
vaxrank 1.4.0
wheel 0.37.1
wheel 0.38.4
wheel 0.41.2
wrapt 1.15.0
wsgiref 0.1.2
xlrd 2.0.1
xvfbwrapper 0.2.9
zipp 3.15.0
zipp 3.6.0
zstandard 0.19.0