joshuatobin257/rnaseq : latest

Latest release: almost 2 years ago - 6,765 downloads - 896 dependencies

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Dependencies

ubuntu/adduser 3.118ubuntu2
ubuntu/adwaita-icon-theme 3.36.1-2ubuntu0.20.04.2
ubuntu/aglfn 1.7 git20191031.4036a9c-2
ubuntu/apt 2.0.9
ubuntu/autoconf 2.69-11.1
ubuntu/automake 1:1.16.1-4ubuntu6
ubuntu/autotools-dev 20180224.1
ubuntu/base-files 11ubuntu5.7
ubuntu/base-passwd 3.5.47
ubuntu/bash 5.0-6ubuntu1.2
ubuntu/bc 1.07.1-2build1
ubuntu/binutils-common 2.34-6ubuntu1.6
ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1.6
ubuntu/binutils 2.34-6ubuntu1.6
ubuntu/bsdutils 1:2.34-0.1ubuntu9.4
ubuntu/build-essential 12.8ubuntu1.1
ubuntu/bzip2 1.0.8-2
ubuntu/ca-certificates-java 20190405ubuntu1.1
ubuntu/ca-certificates 20230311ubuntu0.20.04.1
ubuntu/cmake-data 3.16.3-1ubuntu1.20.04.1
ubuntu/cmake 3.16.3-1ubuntu1.20.04.1
ubuntu/coreutils 8.30-3ubuntu2
ubuntu/cpp-8 8.4.0-3ubuntu2
ubuntu/cpp-9 9.4.0-1ubuntu1~20.04.2
ubuntu/cpp 4:9.3.0-1ubuntu2
ubuntu/curl 7.68.0-1ubuntu2.19
ubuntu/cvs 2:1.12.13 real-27build1
ubuntu/cvsps 2.1-8build2
ubuntu/dash 0.5.10.2-6
ubuntu/dbus-user-session 1.12.16-2ubuntu2.3
ubuntu/dbus 1.12.16-2ubuntu2.3
ubuntu/dconf-gsettings-backend 0.36.0-1
ubuntu/dconf-service 0.36.0-1
ubuntu/debconf 1.5.73
ubuntu/debianutils 4.9.1
ubuntu/diffutils 1:3.7-3
ubuntu/dirmngr 2.2.19-3ubuntu2.2
ubuntu/distro-info-data 0.43ubuntu1.13
ubuntu/dpkg-dev 1.19.7ubuntu3.2
ubuntu/dpkg 1.19.7ubuntu3.2
ubuntu/e2fsprogs 1.45.5-2ubuntu1.1
ubuntu/emacs-bin-common 1:26.3 1-1ubuntu2
ubuntu/emacs-common 1:26.3 1-1ubuntu2
ubuntu/emacs-gtk 1:26.3 1-1ubuntu2
ubuntu/emacs 1:26.3 1-1ubuntu2
ubuntu/emacsen-common 3.0.4
ubuntu/fdisk 2.34-0.1ubuntu9.4
ubuntu/findutils 4.7.0-1ubuntu1
ubuntu/fontconfig-config 2.13.1-2ubuntu3
ubuntu/fontconfig 2.13.1-2ubuntu3
ubuntu/fonts-dejavu-core 2.37-1
ubuntu/g -9 9.4.0-1ubuntu1~20.04.2
ubuntu/g 4:9.3.0-1ubuntu2
ubuntu/gawk 1:5.0.1 dfsg-1ubuntu0.1
ubuntu/gcc-10-base 10.5.0-1ubuntu1~20.04
ubuntu/gcc-8-base 8.4.0-3ubuntu2
ubuntu/gcc-8 8.4.0-3ubuntu2
ubuntu/gcc-9-base 9.4.0-1ubuntu1~20.04.2
ubuntu/gcc-9-multilib 9.4.0-1ubuntu1~20.04.2
ubuntu/gcc-9 9.4.0-1ubuntu1~20.04.2
ubuntu/gcc-multilib 4:9.3.0-1ubuntu2
ubuntu/gcc 4:9.3.0-1ubuntu2
ubuntu/gfortran-8 8.4.0-3ubuntu2
ubuntu/gir1.2-glib-2.0 1.64.1-1~ubuntu20.04.1
ubuntu/gir1.2-packagekitglib-1.0 1.1.13-2ubuntu1.1
ubuntu/git-all 1:2.25.1-1ubuntu3.11
ubuntu/git-cvs 1:2.25.1-1ubuntu3.11
ubuntu/git-doc 1:2.25.1-1ubuntu3.11
ubuntu/git-el 1:2.25.1-1ubuntu3.11
ubuntu/git-email 1:2.25.1-1ubuntu3.11
ubuntu/git-gui 1:2.25.1-1ubuntu3.11
ubuntu/git-man 1:2.25.1-1ubuntu3.11
ubuntu/git-mediawiki 1:2.25.1-1ubuntu3.11
ubuntu/git-svn 1:2.25.1-1ubuntu3.11
ubuntu/git 1:2.25.1-1ubuntu3.11
ubuntu/gitk 1:2.25.1-1ubuntu3.11
ubuntu/gitweb 1:2.25.1-1ubuntu3.11
ubuntu/glib-networking-common 2.64.2-1ubuntu0.1
ubuntu/glib-networking-services 2.64.2-1ubuntu0.1
ubuntu/glib-networking 2.64.2-1ubuntu0.1
ubuntu/gnupg-l10n 2.2.19-3ubuntu2.2
ubuntu/gnupg-utils 2.2.19-3ubuntu2.2
ubuntu/gnupg 2.2.19-3ubuntu2.2
ubuntu/gnuplot-data 5.2.8 dfsg1-2
ubuntu/gnuplot-qt 5.2.8 dfsg1-2
ubuntu/gnuplot 5.2.8 dfsg1-2
ubuntu/gpg-agent 2.2.19-3ubuntu2.2
ubuntu/gpg-wks-client 2.2.19-3ubuntu2.2
ubuntu/gpg-wks-server 2.2.19-3ubuntu2.2
ubuntu/gpg 2.2.19-3ubuntu2.2
ubuntu/gpgconf 2.2.19-3ubuntu2.2
ubuntu/gpgsm 2.2.19-3ubuntu2.2
ubuntu/gpgv 2.2.19-3ubuntu2.2
ubuntu/grep 3.4-1
ubuntu/gsettings-desktop-schemas 3.36.0-1ubuntu1
ubuntu/gtk-update-icon-cache 3.24.20-0ubuntu1.1
ubuntu/gzip 1.10-0ubuntu4.1
ubuntu/hdf5-helpers 1.10.4 repack-11ubuntu1
ubuntu/hicolor-icon-theme 0.17-2
ubuntu/hostname 3.23
ubuntu/humanity-icon-theme 0.6.15
ubuntu/ibverbs-providers 28.0-1ubuntu1
ubuntu/icu-devtools 66.1-2ubuntu2.1
ubuntu/imagemagick-6-common 8:6.9.10.23 dfsg-2.1ubuntu11.9
ubuntu/init-system-helpers 1.57
ubuntu/install-info 6.7.0.dfsg.2-5
ubuntu/iso-codes 4.4-1
ubuntu/java-common 0.72
ubuntu/less 551-1ubuntu0.1
ubuntu/lib32asan5 9.4.0-1ubuntu1~20.04.2
ubuntu/lib32atomic1 10.5.0-1ubuntu1~20.04
ubuntu/lib32gcc-9-dev 9.4.0-1ubuntu1~20.04.2
ubuntu/lib32gcc-s1 10.5.0-1ubuntu1~20.04
ubuntu/lib32gomp1 10.5.0-1ubuntu1~20.04
ubuntu/lib32itm1 10.5.0-1ubuntu1~20.04
ubuntu/lib32quadmath0 10.5.0-1ubuntu1~20.04
ubuntu/lib32stdc 6 10.5.0-1ubuntu1~20.04
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ubuntu/libacl1 2.2.53-6
ubuntu/libaec-dev 1.0.4-1
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ubuntu/libapr1 1.6.5-1ubuntu1
ubuntu/libaprutil1 1.6.1-4ubuntu2.2
ubuntu/libapt-pkg6.0 2.0.9
ubuntu/libarchive13 3.4.0-2ubuntu1.2
ubuntu/libargon2-1 0~20171227-0.2
ubuntu/libasan5 9.4.0-1ubuntu1~20.04.2
ubuntu/libasn1-8-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libasound2-data 1.2.2-2.1ubuntu2.5
ubuntu/libasound2 1.2.2-2.1ubuntu2.5
ubuntu/libassuan0 2.5.3-7ubuntu2
ubuntu/libatk-bridge2.0-0 2.34.2-0ubuntu2~20.04.1
ubuntu/libatk1.0-0 2.35.1-1ubuntu2
ubuntu/libatk1.0-data 2.35.1-1ubuntu2
ubuntu/libatomic1 10.5.0-1ubuntu1~20.04
ubuntu/libatspi2.0-0 2.36.0-2
ubuntu/libattr1 1:2.4.48-5
ubuntu/libaudit-common 1:2.8.5-2ubuntu6
ubuntu/libaudit1 1:2.8.5-2ubuntu6
ubuntu/libavahi-client3 0.7-4ubuntu7.2
ubuntu/libavahi-common-data 0.7-4ubuntu7.2
ubuntu/libavahi-common3 0.7-4ubuntu7.2
ubuntu/libb-hooks-endofscope-perl 0.24-1
ubuntu/libb-hooks-op-check-perl 0.22-1build2
ubuntu/libbinutils 2.34-6ubuntu1.6
ubuntu/libblkid1 2.34-0.1ubuntu9.4
ubuntu/libboost-all-dev 1.71.0.0ubuntu2
ubuntu/libboost-atomic-dev 1.71.0.0ubuntu2
ubuntu/libboost-atomic1.71-dev 1.71.0-6ubuntu6
ubuntu/libboost-atomic1.71.0 1.71.0-6ubuntu6
ubuntu/libboost-chrono-dev 1.71.0.0ubuntu2
ubuntu/libboost-chrono1.71-dev 1.71.0-6ubuntu6
ubuntu/libboost-chrono1.71.0 1.71.0-6ubuntu6
ubuntu/libboost-container-dev 1.71.0.0ubuntu2
ubuntu/libboost-container1.71-dev 1.71.0-6ubuntu6
ubuntu/libboost-container1.71.0 1.71.0-6ubuntu6
ubuntu/libboost-context-dev 1.71.0.0ubuntu2
ubuntu/libboost-context1.71-dev 1.71.0-6ubuntu6
ubuntu/libboost-context1.71.0 1.71.0-6ubuntu6
ubuntu/libboost-coroutine-dev 1.71.0.0ubuntu2
ubuntu/libboost-coroutine1.71-dev 1.71.0-6ubuntu6
ubuntu/libboost-coroutine1.71.0 1.71.0-6ubuntu6
ubuntu/libboost-date-time-dev 1.71.0.0ubuntu2
ubuntu/libboost-date-time1.71-dev 1.71.0-6ubuntu6
ubuntu/libboost-date-time1.71.0 1.71.0-6ubuntu6
ubuntu/libboost-dev 1.71.0.0ubuntu2
ubuntu/libboost-exception-dev 1.71.0.0ubuntu2
ubuntu/libboost-exception1.71-dev 1.71.0-6ubuntu6
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ubuntu/libboost-filesystem1.71.0 1.71.0-6ubuntu6
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ubuntu/libboost-locale1.71-dev 1.71.0-6ubuntu6
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ubuntu/libclass-singleton-perl 1.5-1
ubuntu/libcolord2 1.4.4-2
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ubuntu/libevent-pthreads-2.1-7 2.1.11-stable-1
ubuntu/libexception-class-perl 1.44-1
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ubuntu/libffi7 3.3-4
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ubuntu/libjpeg-dev 8c-2ubuntu8
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ubuntu/libjpeg8-dev 8c-2ubuntu8
ubuntu/libjpeg8 8c-2ubuntu8
ubuntu/libjson-c4 0.13.1 dfsg-7ubuntu0.3
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ubuntu/libjson-perl 4.02000-2
ubuntu/libjsoncpp1 1.7.4-3.1ubuntu2
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ubuntu/libmtdev1 1.1.5-1.1
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ubuntu/libncurses-dev 6.2-0ubuntu2.1
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ubuntu/libnet-ssleay-perl 1.88-2ubuntu1
ubuntu/libnettle7 3.5.1 really3.5.1-2ubuntu0.2
ubuntu/libnghttp2-14 1.40.0-1ubuntu0.1
ubuntu/libnl-3-200 3.4.0-1ubuntu0.1
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ubuntu/libnotify4 0.7.9-1ubuntu3.20.04.2
ubuntu/libnpth0 1.6-1
ubuntu/libnspr4 2:4.25-1
ubuntu/libnss-sss 2.2.3-3ubuntu0.12
ubuntu/libnss3 2:3.49.1-1ubuntu1.9
ubuntu/libnuma-dev 2.0.12-1
ubuntu/libnuma1 2.0.12-1
ubuntu/libogg0 1.3.4-0ubuntu1
ubuntu/libopenmpi-dev 4.0.3-0ubuntu1
ubuntu/libopenmpi3 4.0.3-0ubuntu1
ubuntu/libotf0 0.9.13-7
ubuntu/libp11-kit0 0.23.20-1ubuntu0.1
ubuntu/libpackage-stash-perl 0.38-1
ubuntu/libpackagekit-glib2-18 1.1.13-2ubuntu1.1
ubuntu/libpam-modules-bin 1.3.1-5ubuntu4.6
ubuntu/libpam-modules 1.3.1-5ubuntu4.6
ubuntu/libpam-runtime 1.3.1-5ubuntu4.6
ubuntu/libpam-systemd 245.4-4ubuntu3.22
ubuntu/libpam0g 1.3.1-5ubuntu4.6
ubuntu/libpango-1.0-0 1.44.7-2ubuntu4
ubuntu/libpangocairo-1.0-0 1.44.7-2ubuntu4
ubuntu/libpangoft2-1.0-0 1.44.7-2ubuntu4
ubuntu/libparams-classify-perl 0.015-1build2
ubuntu/libparams-util-perl 1.07-3build5
ubuntu/libparams-validate-perl 1.29-3
ubuntu/libparams-validationcompiler-perl 0.30-1
ubuntu/libpciaccess0 0.16-0ubuntu1
ubuntu/libpcre2-16-0 10.34-7ubuntu0.1
ubuntu/libpcre2-8-0 10.34-7ubuntu0.1
ubuntu/libpcre3 2:8.39-12ubuntu0.1
ubuntu/libpcsclite1 1.8.26-3
ubuntu/libperl5.30 5.30.0-9ubuntu0.4
ubuntu/libpixman-1-0 0.38.4-0ubuntu2.1
ubuntu/libpmix2 3.1.5-1
ubuntu/libpng16-16 1.6.37-2
ubuntu/libpolkit-agent-1-0 0.105-26ubuntu1.3
ubuntu/libpolkit-gobject-1-0 0.105-26ubuntu1.3
ubuntu/libprocps8 2:3.3.16-1ubuntu2.3
ubuntu/libproxy1v5 0.4.15-10ubuntu1.2
ubuntu/libpsl5 0.21.0-1ubuntu1
ubuntu/libpsm-infinipath1 3.3 20.604758e7-6
ubuntu/libpsm2-2 11.2.86-1
ubuntu/libpython3-dev 3.8.2-0ubuntu2
ubuntu/libpython3-stdlib 3.8.2-0ubuntu2
ubuntu/libpython3.8-dev 3.8.10-0ubuntu1~20.04.8
ubuntu/libpython3.8-minimal 3.8.10-0ubuntu1~20.04.8
ubuntu/libpython3.8-stdlib 3.8.10-0ubuntu1~20.04.8
ubuntu/libpython3.8 3.8.10-0ubuntu1~20.04.8
ubuntu/libqt5core5a 5.12.8 dfsg-0ubuntu2.1
ubuntu/libqt5dbus5 5.12.8 dfsg-0ubuntu2.1
ubuntu/libqt5gui5 5.12.8 dfsg-0ubuntu2.1
ubuntu/libqt5network5 5.12.8 dfsg-0ubuntu2.1
ubuntu/libqt5printsupport5 5.12.8 dfsg-0ubuntu2.1
ubuntu/libqt5svg5 5.12.8-0ubuntu1
ubuntu/libqt5widgets5 5.12.8 dfsg-0ubuntu2.1
ubuntu/libquadmath0 10.5.0-1ubuntu1~20.04
ubuntu/librdmacm1 28.0-1ubuntu1
ubuntu/libreadline8 8.0-4
ubuntu/librest-0.7-0 0.8.1-1
ubuntu/librhash0 1.3.9-1
ubuntu/libroken18-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/librole-tiny-perl 2.001004-1
ubuntu/librsvg2-2 2.48.9-1ubuntu0.20.04.4
ubuntu/librsvg2-common 2.48.9-1ubuntu0.20.04.4
ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-2build1
ubuntu/libsasl2-2 2.1.27 dfsg-2ubuntu0.1
ubuntu/libsasl2-modules-db 2.1.27 dfsg-2ubuntu0.1
ubuntu/libseccomp2 2.5.1-1ubuntu1~20.04.2
ubuntu/libselinux1 3.0-1build2
ubuntu/libsemanage-common 3.0-1build2
ubuntu/libsemanage1 3.0-1build2
ubuntu/libsensors-config 1:3.6.0-2ubuntu1.1
ubuntu/libsensors5 1:3.6.0-2ubuntu1.1
ubuntu/libsepol1 3.0-1ubuntu0.1
ubuntu/libserf-1-1 1.3.9-8build1
ubuntu/libsigsegv2 2.12-2
ubuntu/libsm6 2:1.2.3-1
ubuntu/libsmartcols1 2.34-0.1ubuntu9.4
ubuntu/libsoup-gnome2.4-1 2.70.0-1
ubuntu/libsoup2.4-1 2.70.0-1
ubuntu/libspecio-perl 0.45-1
ubuntu/libsqlite3-0 3.31.1-4ubuntu0.5
ubuntu/libss2 1.45.5-2ubuntu1.1
ubuntu/libssh-4 0.9.3-2ubuntu2.3
ubuntu/libssl-dev 1.1.1f-1ubuntu2.19
ubuntu/libssl1.1 1.1.1f-1ubuntu2.19
ubuntu/libstdc -9-dev 9.4.0-1ubuntu1~20.04.2
ubuntu/libstdc 6 10.5.0-1ubuntu1~20.04
ubuntu/libstemmer0d 0 svn585-2
ubuntu/libsub-exporter-perl 0.987-1
ubuntu/libsub-exporter-progressive-perl 0.001013-1
ubuntu/libsub-identify-perl 0.14-1build2
ubuntu/libsub-install-perl 0.928-1
ubuntu/libsub-name-perl 0.26-1
ubuntu/libsub-quote-perl 2.006006-1
ubuntu/libsvn-perl 1.13.0-3ubuntu0.2
ubuntu/libsvn1 1.13.0-3ubuntu0.2
ubuntu/libsystemd0 245.4-4ubuntu3.22
ubuntu/libsz2 1.0.4-1
ubuntu/libtasn1-6 4.16.0-2
ubuntu/libtcl8.6 8.6.10 dfsg-1
ubuntu/libtdb1 1.4.5-0ubuntu0.20.04.1
ubuntu/libterm-readkey-perl 2.38-1build1
ubuntu/libthai-data 0.1.28-3
ubuntu/libthai0 0.1.28-3
ubuntu/libtiff5 4.1.0 git191117-2ubuntu0.20.04.9
ubuntu/libtimedate-perl 2.3200-1
ubuntu/libtinfo6 6.2-0ubuntu2.1
ubuntu/libtk8.6 8.6.10-1
ubuntu/libtry-tiny-perl 0.30-1
ubuntu/libtsan0 10.5.0-1ubuntu1~20.04
ubuntu/libubsan1 10.5.0-1ubuntu1~20.04
ubuntu/libudev1 245.4-4ubuntu3.22
ubuntu/libunistring2 0.9.10-2
ubuntu/liburi-perl 1.76-2
ubuntu/libutf8proc2 2.5.0-1
ubuntu/libuuid1 2.34-0.1ubuntu9.4
ubuntu/libuv1 1.34.2-1ubuntu1.3
ubuntu/libvariable-magic-perl 0.62-1build2
ubuntu/libvorbis0a 1.3.6-2ubuntu1
ubuntu/libvorbisfile3 1.3.6-2ubuntu1
ubuntu/libvulkan1 1.2.131.2-1
ubuntu/libwacom-common 1.3-2ubuntu3
ubuntu/libwacom2 1.3-2ubuntu3
ubuntu/libwayland-client0 1.18.0-1ubuntu0.1
ubuntu/libwayland-cursor0 1.18.0-1ubuntu0.1
ubuntu/libwayland-egl1 1.18.0-1ubuntu0.1
ubuntu/libwayland-server0 1.18.0-1ubuntu0.1
ubuntu/libwebp6 0.6.1-2ubuntu0.20.04.3
ubuntu/libwebpmux3 0.6.1-2ubuntu0.20.04.3
ubuntu/libwind0-heimdal 7.7.0 dfsg-1ubuntu1.4
ubuntu/libwww-perl 6.43-1
ubuntu/libwww-robotrules-perl 6.02-1
ubuntu/libwxbase3.0-0v5 3.0.4 dfsg-15build1
ubuntu/libwxgtk3.0-gtk3-0v5 3.0.4 dfsg-15build1
ubuntu/libx11-6 2:1.6.9-2ubuntu1.6
ubuntu/libx11-data 2:1.6.9-2ubuntu1.6
ubuntu/libx11-xcb1 2:1.6.9-2ubuntu1.6
ubuntu/libx32asan5 9.4.0-1ubuntu1~20.04.2
ubuntu/libx32atomic1 10.5.0-1ubuntu1~20.04
ubuntu/libx32gcc-9-dev 9.4.0-1ubuntu1~20.04.2
ubuntu/libx32gcc-s1 10.5.0-1ubuntu1~20.04
ubuntu/libx32gomp1 10.5.0-1ubuntu1~20.04
ubuntu/libx32itm1 10.5.0-1ubuntu1~20.04
ubuntu/libx32quadmath0 10.5.0-1ubuntu1~20.04
ubuntu/libx32stdc 6 10.5.0-1ubuntu1~20.04
ubuntu/libx32ubsan1 10.5.0-1ubuntu1~20.04
ubuntu/libxau6 1:1.0.9-0ubuntu1
ubuntu/libxcb-dri2-0 1.14-2
ubuntu/libxcb-dri3-0 1.14-2
ubuntu/libxcb-glx0 1.14-2
ubuntu/libxcb-icccm4 0.4.1-1.1
ubuntu/libxcb-image0 0.4.0-1build1
ubuntu/libxcb-keysyms1 0.4.0-1build1
ubuntu/libxcb-present0 1.14-2
ubuntu/libxcb-randr0 1.14-2
ubuntu/libxcb-render-util0 0.3.9-1build1
ubuntu/libxcb-render0 1.14-2
ubuntu/libxcb-shape0 1.14-2
ubuntu/libxcb-shm0 1.14-2
ubuntu/libxcb-sync1 1.14-2
ubuntu/libxcb-util1 0.4.0-0ubuntu3
ubuntu/libxcb-xfixes0 1.14-2
ubuntu/libxcb-xinerama0 1.14-2
ubuntu/libxcb-xinput0 1.14-2
ubuntu/libxcb-xkb1 1.14-2
ubuntu/libxcb1 1.14-2
ubuntu/libxcomposite1 1:0.4.5-1
ubuntu/libxcursor1 1:1.2.0-2
ubuntu/libxdamage1 1:1.1.5-2
ubuntu/libxdmcp6 1:1.1.3-0ubuntu1
ubuntu/libxext6 2:1.3.4-0ubuntu1
ubuntu/libxfixes3 1:5.0.3-2
ubuntu/libxft2 2.3.3-0ubuntu1
ubuntu/libxi6 2:1.7.10-0ubuntu1
ubuntu/libxinerama1 2:1.1.4-2
ubuntu/libxkbcommon-x11-0 0.10.0-1
ubuntu/libxkbcommon0 0.10.0-1
ubuntu/libxml2 2.9.10 dfsg-5ubuntu0.20.04.6
ubuntu/libxnvctrl0 470.57.01-0ubuntu0.20.04.3
ubuntu/libxpm4 1:3.5.12-1ubuntu0.20.04.2
ubuntu/libxrandr2 2:1.5.2-0ubuntu1
ubuntu/libxrender1 1:0.9.10-1
ubuntu/libxshmfence1 1.3-1
ubuntu/libxss1 1:1.2.3-1
ubuntu/libxstring-perl 0.002-2
ubuntu/libxt6 1:1.1.5-1
ubuntu/libxtst6 2:1.2.3-1
ubuntu/libxxf86vm1 1:1.1.4-1build1
ubuntu/libyaml-0-2 0.2.2-1
ubuntu/libyaml-perl 1.30-1
ubuntu/libzstd1 1.4.4 dfsg-3ubuntu0.1
ubuntu/linux-libc-dev 5.4.0-164.181
ubuntu/login 1:4.8.1-1ubuntu5.20.04.4
ubuntu/logsave 1.45.5-2ubuntu1.1
ubuntu/lsb-base 11.1.0ubuntu2
ubuntu/lsb-release 11.1.0ubuntu2
ubuntu/m17n-db 1.8.0-3
ubuntu/m4 1.4.18-4
ubuntu/make 4.2.1-1.2
ubuntu/mawk 1.3.4.20200120-2
ubuntu/mime-support 3.64ubuntu1
ubuntu/mount 2.34-0.1ubuntu9.4
ubuntu/mpi-default-bin 1.13
ubuntu/mpi-default-dev 1.13
ubuntu/ncurses-base 6.2-0ubuntu2.1
ubuntu/ncurses-bin 6.2-0ubuntu2.1
ubuntu/netbase 6.1
ubuntu/ocl-icd-libopencl1 2.2.11-1ubuntu1
ubuntu/openjdk-11-jre-headless 11.0.20.1 1-0ubuntu1~20.04
ubuntu/openjdk-11-jre 11.0.20.1 1-0ubuntu1~20.04
ubuntu/openmpi-bin 4.0.3-0ubuntu1
ubuntu/openmpi-common 4.0.3-0ubuntu1
ubuntu/openssh-client 1:8.2p1-4ubuntu0.9
ubuntu/openssl 1.1.1f-1ubuntu2.19
ubuntu/packagekit 1.1.13-2ubuntu1.1
ubuntu/passwd 1:4.8.1-1ubuntu5.20.04.4
ubuntu/patch 2.7.6-6
ubuntu/perl-base 5.30.0-9ubuntu0.4
ubuntu/perl-modules-5.30 5.30.0-9ubuntu0.4
ubuntu/perl-openssl-defaults 4
ubuntu/perl 5.30.0-9ubuntu0.4
ubuntu/pinentry-curses 1.1.0-3build1
ubuntu/policykit-1 0.105-26ubuntu1.3
ubuntu/procps 2:3.3.16-1ubuntu2.3
ubuntu/python-apt-common 2.0.1ubuntu0.20.04.1
ubuntu/python-pip-whl 20.0.2-5ubuntu1.9
ubuntu/python3-apt 2.0.1ubuntu0.20.04.1
ubuntu/python3-certifi 2019.11.28-1
ubuntu/python3-chardet 3.0.4-4build1
ubuntu/python3-dbus 1.2.16-1build1
ubuntu/python3-dev 3.8.2-0ubuntu2
ubuntu/python3-distutils 3.8.10-0ubuntu1~20.04
ubuntu/python3-gi 3.36.0-1
ubuntu/python3-idna 2.8-1
ubuntu/python3-lib2to3 3.8.10-0ubuntu1~20.04
ubuntu/python3-minimal 3.8.2-0ubuntu2
ubuntu/python3-pip 20.0.2-5ubuntu1.9
ubuntu/python3-pkg-resources 45.2.0-1ubuntu0.1
ubuntu/python3-requests-unixsocket 0.2.0-2
ubuntu/python3-requests 2.22.0-2ubuntu1.1
ubuntu/python3-setuptools 45.2.0-1ubuntu0.1
ubuntu/python3-six 1.14.0-2
ubuntu/python3-software-properties 0.99.9.12
ubuntu/python3-urllib3 1.25.8-2ubuntu0.2
ubuntu/python3-wheel 0.34.2-1ubuntu0.1
ubuntu/python3.8-dev 3.8.10-0ubuntu1~20.04.8
ubuntu/python3.8-minimal 3.8.10-0ubuntu1~20.04.8
ubuntu/python3.8 3.8.10-0ubuntu1~20.04.8
ubuntu/python3 3.8.2-0ubuntu2
ubuntu/readline-common 8.0-4
ubuntu/sed 4.7-1
ubuntu/sensible-utils 0.0.12 nmu1
ubuntu/shared-mime-info 1.15-1
ubuntu/software-properties-common 0.99.9.12
ubuntu/sound-theme-freedesktop 0.8-2ubuntu1
ubuntu/systemd-sysv 245.4-4ubuntu3.22
ubuntu/systemd-timesyncd 245.4-4ubuntu3.22
ubuntu/systemd 245.4-4ubuntu3.22
ubuntu/sysvinit-utils 2.96-2.1ubuntu1
ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.3
ubuntu/tcl8.6 8.6.10 dfsg-1
ubuntu/tcl 8.6.9 1
ubuntu/tk8.6 8.6.10-1
ubuntu/tk 8.6.9 1
ubuntu/tzdata 2023c-0ubuntu0.20.04.2
ubuntu/ubuntu-keyring 2020.02.11.4
ubuntu/ubuntu-mono 19.04-0ubuntu3
ubuntu/ucf 3.0038 nmu1
ubuntu/unzip 6.0-25ubuntu1.1
ubuntu/util-linux 2.34-0.1ubuntu9.4
ubuntu/vim-common 2:8.1.2269-1ubuntu5.18
ubuntu/vim-runtime 2:8.1.2269-1ubuntu5.18
ubuntu/vim 2:8.1.2269-1ubuntu5.18
ubuntu/wget 1.20.3-1ubuntu2
ubuntu/x11-common 1:7.7 19ubuntu14
ubuntu/xkb-data 2.29-2
ubuntu/xxd 2:8.1.2269-1ubuntu5.18
ubuntu/xz-utils 5.2.4-1ubuntu1.1
ubuntu/zip 3.0-11build1
ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.5
ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5

bash 5.0.17
python 3.7.1

actions/checkout master
actions/checkout v2
actions/checkout v3
actions/upload-artifact v1
actions/upload-artifact v2
codecov/codecov-action v2
google/oss-fuzz master
google/oss-fuzz master
ilammy/msvc-dev-cmd v1.10.0
maxim-lobanov/setup-xcode v1
svenstaro/upload-release-action v1-release

AbsoluteLayout-RELEASE110:AbsoluteLayout-RELEASE110 *
cisd-jhdf5:cisd-jhdf5 *
com.fasterxml.jackson.core:jackson-annotations 2.12.1
com.fasterxml.jackson.core:jackson-core 2.12.1
com.fasterxml.jackson.core:jackson-databind 2.12.1
com.google.code.gson:gson 2.8.5
com.google.guava:guava 15.0
com.google.guava:guava 27.0.1-jre
com.google.j2objc:j2objc-annotations 1.1
com.jidesoft.utils.Lm:jide-common 3.7.3
com.typesafe.netty:netty-reactive-streams-http 2.0.4
com.typesafe.netty:netty-reactive-streams 2.0.4
commons-codec:commons-codec 1.11
commons-io:commons-io 1.4
commons-io:commons-io 2.4
commons-io:commons-io 2.6
commons-lang:commons-lang 2.4
commons-lang:commons-lang 2.6
commons-logging:commons-logging 1.1.1
commons-logging:commons-logging 1.2
htsjdk:htsjdk 3.0.0
io.netty:netty-buffer 4.1.59.Final
io.netty:netty-codec-http 4.1.59.Final
io.netty:netty-codec 4.1.59.Final
io.netty:netty-common 4.1.59.Final
io.netty:netty-handler 4.1.59.Final
io.netty:netty-resolver 4.1.59.Final
io.netty:netty-transport-native-epoll 4.1.59.Final
io.netty:netty-transport-native-unix-common 4.1.59.Final
io.netty:netty-transport 4.1.59.Final
jbzip2:jbzip2 0.9
jrt-fs:jrt-fs 11.0.20.1
net.sf.jopt-simple:jopt-simple 5.0.3
ngs-java:ngs-java 2.9.0
org.apache.commons:commons-collections4 4.3
org.apache.commons:commons-compress 1.19
org.apache.commons:commons-compress 1.4.1
org.apache.commons:commons-jexl 2.1.1
org.apache.commons:commons-lang3 3.4
org.apache.commons:commons-lang3 3.9
org.apache.commons:commons-math3 3.5
org.apache.commons:commons-math3 3.6.1
org.apache.httpcomponents:httpclient 4.5.13
org.apache.httpcomponents:httpcore 4.4.13
org.apache.logging.log4j:log4j-api 2.5
org.apache.logging.log4j:log4j-core 2.5
org.apache.xmlgraphics:batik-awt-util 1.11
org.apache.xmlgraphics:batik-codec 1.11
org.apache.xmlgraphics:batik-constants 1.11
org.apache.xmlgraphics:batik-dom 1.11
org.apache.xmlgraphics:batik-ext 1.11
org.apache.xmlgraphics:batik-i18n 1.11
org.apache.xmlgraphics:batik-svggen 1.11
org.apache.xmlgraphics:batik-transcoder 1.11
org.apache.xmlgraphics:batik-util 1.11
org.apache.xmlgraphics:batik-xml 1.11
org.broad.igv.ui.Main:igv *
org.debian.security.UpdateCertificates:ca-certificates-java *
org.jctools:jctools-core 3.1.0
org.reactivestreams.reactive-streams:reactive-streams 1.0.3
org.sharegov:mjson 1.4.1
org.slf4j:slf4j-api 1.7.28
org.xerial.snappy:snappy-java 1.1.8.4
picard:picard 2.21.5-SNAPSHOT
sam:sam 1.103
software.amazon.awssdk:annotations 2.16.7
software.amazon.awssdk:apache-client 2.16.7
software.amazon.awssdk:arns 2.16.7
software.amazon.awssdk:auth 2.16.7
software.amazon.awssdk:aws-core 2.16.7
software.amazon.awssdk:aws-json-protocol 2.16.7
software.amazon.awssdk:aws-query-protocol 2.16.7
software.amazon.awssdk:aws-xml-protocol 2.16.7
software.amazon.awssdk:cognitoidentity 2.16.7
software.amazon.awssdk:http-client-spi 2.16.7
software.amazon.awssdk:metrics-spi 2.16.7
software.amazon.awssdk:netty-nio-client 2.16.7
software.amazon.awssdk:profiles 2.16.7
software.amazon.awssdk:protocol-core 2.16.7
software.amazon.awssdk:regions 2.16.7
software.amazon.awssdk:s3 2.16.7
software.amazon.awssdk:sdk-core 2.16.7
software.amazon.awssdk:sts 2.16.7
software.amazon.awssdk:utils 2.16.7
software.amazon.eventstream:eventstream 1.0.1
swing-layout:swing-layout 1.0.3
xmlgraphics-commons:xmlgraphics-commons 2.3