Ecosyste.ms: Docker

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dmiller15/vcfmerger2 : 0.9.3_tgen

Latest release: almost 2 years ago - 89 downloads - 865 dependencies

JSON

Dependencies

KernSmooth 2.23-15
MASS 7.3-51.4
Matrix 1.2-17
R6 2.5.1
RColorBrewer 1.1-3
Rcpp 1.0.9
UpSetR 1.4.0
base 3.6.1
boot 1.3-22
class 7.3-15
cli 3.6.0
cluster 2.1.0
codetools 0.2-16
colorspace 2.0-3
compiler 3.6.1
datasets 3.6.1
fansi 1.0.3
farver 2.1.1
foreign 0.8-71
ggplot2 3.4.0
glue 1.6.2
grDevices 3.6.1
graphics 3.6.1
grid 3.6.1
gridExtra 2.3
gtable 0.3.1
isoband 0.2.7
labeling 0.4.2
lattice 0.20-38
lifecycle 1.0.3
magrittr 2.0.3
methods 3.6.1
mgcv 1.8-28
munsell 0.5.0
nlme 3.1-140
nnet 7.3-12
parallel 3.6.1
pillar 1.8.1
pkgconfig 2.0.3
plyr 1.8.8
rlang 1.0.6
rpart 4.1-15
scales 1.2.1
spatial 7.3-11
splines 3.6.1
stats4 3.6.1
stats 3.6.1
survival 2.44-1.1
tcltk 3.6.1
testRcppAttributePackage 1.0
testRcppClass 0.1
testRcppInterfaceExporter 0.1.0
testRcppInterfaceUser 0.1.0
testRcppModule 0.1
testRcppPackage 0.1.0
tibble 3.1.8
tools 3.6.1
translations 3.6.1
utf8 1.2.2
utils 3.6.1
vctrs 0.5.1
viridisLite 0.4.1
withr 2.5.0

com.clineff.commandLine.ClinEff:ClinEff 1.2.15
com.googlecode.charts4j:charts4j 1.3
commons-cli:commons-cli 1.2
commons-codec:commons-codec 1.10
commons-io:commons-io 2.4
jrt-fs:jrt-fs 11.0.17
log4j:log4j 1.2.15
org.abego.treelayout:org.abego.treelayout.core 1.0.1
org.antlr:ST4 4.0.8
org.antlr:antlr-runtime 3.5.2
org.antlr:antlr4-runtime 4.5.1-1
org.antlr:antlr4 4.5.1-1
org.apache.commons:commons-math3 3.2
org.apfloat:apfloat 1.6.3
org.biojava:biojava3-core 3.0.7
org.biojava:biojava3-structure 3.0.7
org.snpeff.SnpEff:snpEff *
org.snpeff:SnpEff 4.3
org.snpsift.SnpSift:SnpSift *

Cython 0.28.1
Pillow 9.4.0
PyGObject 3.28.3
argparse 1.1
click 8.1.3
coloredlogs 15.0.1
configobj 5.0.6
contourpy 1.0.6
cycler 0.11.0
cyvcf2 0.30.18
dbus-python 1.2.4
decorator 4.2.1
fonttools 4.38.0
gpg 1.13.1
humanfriendly 10.0
intervene 0.6.4
kiwisolver 1.4.4
libcomps 0.1.18
matplotlib 3.6.2
natsort 5.0.3
nftables 0.1
numpy 1.16.6
numpy 1.24.1
packaging 23.0
pandas 1.5.2
perf 0.1
pip 19.3.1
pip 22.3.1
pip 9.0.3
pybedtools 0.9.0
pyparsing 3.0.9
pysam 0.20.0
python-dateutil 2.6.1
python-dateutil 2.8.2
python-linux-procfs 0.7.0
pytz 2022.7
pyudev 0.21.0
rpm 4.14.3
scipy 1.10.0
scipy 1.2.3
seaborn 0.12.2
selinux 2.9
setuptools 39.0.1
setuptools 39.2.0
setuptools 41.6.0
six 1.11.0
six 1.16.0
slip.dbus 0.6.4
slip 0.6.4
syspurpose 1.28.32
wsgiref 0.1.2

rocky/ImageMagick-c -devel 6.9.12.70-1.el8
rocky/ImageMagick-c 6.9.12.70-1.el8
rocky/ImageMagick-devel 6.9.12.70-1.el8
rocky/ImageMagick-libs 6.9.12.70-1.el8
rocky/ImageMagick 6.9.12.70-1.el8
rocky/LibRaw 0.19.5-3.el8
rocky/Lmod 8.7.7-1.el8
rocky/NetworkManager-initscripts-updown 1.40.0-2.el8_7
rocky/NetworkManager-libnm 1.40.0-2.el8_7
rocky/NetworkManager-team 1.40.0-2.el8_7
rocky/NetworkManager-tui 1.40.0-2.el8_7
rocky/NetworkManager 1.40.0-2.el8_7
rocky/OpenEXR-libs 2.2.0-12.el8
rocky/abattis-cantarell-fonts 0.0.25-6.el8
rocky/acl 2.2.53-1.el8.1
rocky/adobe-mappings-cmap-deprecated 20171205-3.el8
rocky/adobe-mappings-cmap 20171205-3.el8
rocky/adobe-mappings-pdf 20180407-1.el8
rocky/adwaita-cursor-theme 3.28.0-3.el8
rocky/adwaita-icon-theme 3.28.0-3.el8
rocky/alsa-lib 1.2.7.2-1.el8
rocky/annobin 10.67-3.el8
rocky/at-spi2-atk 2.26.2-1.el8
rocky/at-spi2-core 2.28.0-1.el8
rocky/atk 2.28.1-1.el8
rocky/audit-libs 3.0.7-4.el8
rocky/audit 3.0.7-4.el8
rocky/authselect-libs 1.2.5-1.el8
rocky/authselect 1.2.5-1.el8
rocky/autoconf 2.69-29.el8
rocky/automake 1.16.1-7.el8
rocky/avahi-libs 0.7-20.el8
rocky/basesystem 11-5.el8
rocky/bash 4.4.20-4.el8_6
rocky/binutils 2.30-117.el8
rocky/biosdevname 0.7.3-2.el8
rocky/brotli 1.0.6-3.el8
rocky/bzip2-devel 1.0.6-26.el8
rocky/bzip2-libs 1.0.6-26.el8
rocky/bzip2 1.0.6-26.el8
rocky/c-ares 1.13.0-6.el8
rocky/ca-certificates 2022.2.54-80.2.el8_6
rocky/cairo-devel 1.15.12-6.el8
rocky/cairo-gobject 1.15.12-6.el8
rocky/cairo 1.15.12-6.el8
rocky/chkconfig 1.19.1-1.el8
rocky/cmake-data 3.20.2-4.el8
rocky/cmake-filesystem 3.20.2-4.el8
rocky/cmake-rpm-macros 3.20.2-4.el8
rocky/cmake 3.20.2-4.el8
rocky/colord-libs 1.4.2-1.el8
rocky/copy-jdk-configs 4.0-2.el8
rocky/coreutils-common 8.30-13.el8
rocky/coreutils 8.30-13.el8
rocky/cpio 2.12-11.el8
rocky/cpp 8.5.0-15.el8
rocky/cracklib-dicts 2.9.6-15.el8
rocky/cracklib 2.9.6-15.el8
rocky/cronie-anacron 1.5.2-8.el8
rocky/cronie 1.5.2-8.el8
rocky/crontabs 1.11-17.20190603git.el8
rocky/crypto-policies-scripts 20211116-1.gitae470d6.el8
rocky/crypto-policies 20211116-1.gitae470d6.el8
rocky/cryptsetup-libs 2.3.7-2.el8
rocky/cups-libs 2.2.6-50.el8
rocky/curl 7.61.1-25.el8
rocky/cyrus-sasl-lib 2.1.27-6.el8_5
rocky/dbus-common 1.12.8-23.el8
rocky/dbus-daemon 1.12.8-23.el8
rocky/dbus-glib 0.110-2.el8
rocky/dbus-libs 1.12.8-23.el8
rocky/dbus-tools 1.12.8-23.el8
rocky/dbus 1.12.8-23.el8
rocky/dconf 0.28.0-4.el8
rocky/dejavu-fonts-common 2.35-7.el8
rocky/dejavu-sans-mono-fonts 2.35-7.el8
rocky/device-mapper-libs 1.02.181-6.el8
rocky/device-mapper 1.02.181-6.el8
rocky/diffutils 3.6-6.el8
rocky/dmidecode 3.3-4.el8
rocky/dnf-data 4.7.0-11.el8
rocky/dnf-plugins-core 4.0.21-14.1.el8
rocky/dnf 4.7.0-11.el8
rocky/dracut-config-rescue 049-209.git20220815.el8
rocky/dracut-network 049-209.git20220815.el8
rocky/dracut-squash 049-209.git20220815.el8
rocky/dracut 049-209.git20220815.el8
rocky/dwz 0.12-10.el8
rocky/e2fsprogs-libs 1.45.6-5.el8
rocky/e2fsprogs 1.45.6-5.el8
rocky/efi-srpm-macros 3-3.el8
rocky/elfutils-debuginfod-client 0.187-4.el8
rocky/elfutils-default-yama-scope 0.187-4.el8
rocky/elfutils-libelf 0.187-4.el8
rocky/elfutils-libs 0.187-4.el8
rocky/emacs-filesystem 26.1-7.el8
rocky/epel-release 8-18.el8
rocky/ethtool 5.13-2.el8
rocky/expat-devel 2.2.5-10.el8
rocky/expat 2.2.5-10.el8
rocky/fftw-devel 3.3.5-11.el8
rocky/fftw-libs-double 3.3.5-11.el8
rocky/fftw-libs-long 3.3.5-11.el8
rocky/fftw-libs-quad 3.3.5-11.el8
rocky/fftw-libs-single 3.3.5-11.el8
rocky/fftw-libs 3.3.5-11.el8
rocky/fftw 3.3.5-11.el8
rocky/file-libs 5.33-21.el8
rocky/file 5.33-21.el8
rocky/filesystem 3.8-6.el8
rocky/findutils 4.6.0-20.el8
rocky/firewalld-filesystem 0.9.3-13.el8
rocky/firewalld 0.9.3-13.el8
rocky/flac-libs 1.3.2-9.el8
rocky/fontconfig-devel 2.13.1-4.el8
rocky/fontconfig 2.13.1-4.el8
rocky/fontpackages-filesystem 1.44-22.el8
rocky/freetype-devel 2.9.1-9.el8
rocky/freetype 2.9.1-9.el8
rocky/fribidi 1.0.4-9.el8
rocky/fuse-libs 2.9.7-16.el8
rocky/gawk 4.2.1-4.el8
rocky/gcc-c 8.5.0-15.el8
rocky/gcc-gfortran 8.5.0-15.el8
rocky/gcc-plugin-annobin 8.5.0-15.el8
rocky/gcc 8.5.0-15.el8
rocky/gd 2.2.5-7.el8
rocky/gdbm-libs 1.18-2.el8
rocky/gdbm 1.18-2.el8
rocky/gdk-pixbuf2-modules 2.36.12-5.el8
rocky/gdk-pixbuf2 2.36.12-5.el8
rocky/gettext-libs 0.19.8.1-17.el8
rocky/gettext 0.19.8.1-17.el8
rocky/ghc-srpm-macros 1.4.2-7.el8
rocky/giflib 5.1.4-3.el8
rocky/git-core-doc 2.31.1-2.el8
rocky/git-core 2.31.1-2.el8
rocky/git 2.31.1-2.el8
rocky/gl-manpages 1.1-15.20161227.el8
rocky/glib-networking 2.56.1-1.1.el8
rocky/glib2-devel 2.56.4-158.el8_6.1
rocky/glib2 2.56.4-158.el8_6.1
rocky/glibc-all-langpacks 2.28-211.el8
rocky/glibc-common 2.28-211.el8
rocky/glibc-devel 2.28-211.el8
rocky/glibc-gconv-extra 2.28-211.el8
rocky/glibc-headers 2.28-211.el8
rocky/glibc 2.28-211.el8
rocky/gmp-c 6.1.2-10.el8
rocky/gmp-devel 6.1.2-10.el8
rocky/gmp 6.1.2-10.el8
rocky/gnu-free-fonts-common 20120503-18.el8
rocky/gnu-free-sans-fonts 20120503-18.el8
rocky/gnupg2-smime 2.2.20-3.el8_6
rocky/gnupg2 2.2.20-3.el8_6
rocky/gnutls 3.6.16-5.el8_6
rocky/go-srpm-macros 2-17.el8
rocky/gobject-introspection 1.56.1-1.el8
rocky/google-droid-sans-fonts 20120715-13.el8
rocky/gpg-pubkey 2f86d6a1-5cf7cefb
rocky/gpg-pubkey 6d745a60-60287f36
rocky/gpgme 1.13.1-11.el8
rocky/graphite2 1.3.10-10.el8
rocky/graphviz 2.40.1-43.el8
rocky/grep 3.1-6.el8
rocky/groff-base 1.22.3-18.el8
rocky/grub2-common 2.02-142.el8.rocky.0.2
rocky/grub2-tools-efi 2.02-142.el8.rocky.0.2
rocky/grub2-tools-extra 2.02-142.el8.rocky.0.2
rocky/grub2-tools-minimal 2.02-142.el8.rocky.0.2
rocky/grub2-tools 2.02-142.el8.rocky.0.2
rocky/grubby 8.40-47.el8
rocky/gsettings-desktop-schemas 3.32.0-6.el8
rocky/gsl-devel 2.5-1.el8
rocky/gsl 2.5-1.el8
rocky/gsm 1.0.17-5.el8
rocky/gtk-update-icon-cache 3.22.30-11.el8
rocky/gtk2 2.24.32-5.el8
rocky/gtk3 3.22.30-11.el8
rocky/gzip 1.9-13.el8_5
rocky/hardlink 1.3-6.el8
rocky/harfbuzz 1.7.5-3.el8
rocky/hdf5-devel 1.10.5-4.el8
rocky/hdf5 1.10.5-4.el8
rocky/hdparm 9.54-4.el8
rocky/hicolor-icon-theme 0.17-2.el8
rocky/hostname 3.20-6.el8
rocky/hwdata 0.314-8.14.el8
rocky/hwloc-libs 2.2.0-3.el8
rocky/ilmbase 2.2.0-13.el8
rocky/ima-evm-utils 1.3.2-12.el8
rocky/info 6.5-7.el8
rocky/initscripts 10.00.18-1.el8
rocky/iproute 5.18.0-1.el8
rocky/iprutils 2.4.19-1.el8
rocky/ipset-libs 7.1-1.el8
rocky/ipset 7.1-1.el8
rocky/iptables-ebtables 1.8.4-23.el8
rocky/iptables-libs 1.8.4-23.el8
rocky/iptables 1.8.4-23.el8
rocky/iputils 20180629-10.el8
rocky/irqbalance 1.9.0-3.el8
rocky/isl 0.16.1-6.el8
rocky/iwl100-firmware 39.31.5.1-110.el8.1
rocky/iwl1000-firmware 39.31.5.1-110.el8.1
rocky/iwl105-firmware 18.168.6.1-110.el8.1
rocky/iwl135-firmware 18.168.6.1-110.el8.1
rocky/iwl2000-firmware 18.168.6.1-110.el8.1
rocky/iwl2030-firmware 18.168.6.1-110.el8.1
rocky/iwl3160-firmware 25.30.13.0-110.el8.1
rocky/iwl5000-firmware 8.83.5.1_1-110.el8.1
rocky/iwl5150-firmware 8.24.2.2-110.el8.1
rocky/iwl6000-firmware 9.221.4.1-110.el8.1
rocky/iwl6000g2a-firmware 18.168.6.1-110.el8.1
rocky/iwl6050-firmware 41.28.5.1-110.el8.1
rocky/iwl7260-firmware 25.30.13.0-110.el8.1
rocky/jansson 2.14-1.el8
rocky/jasper-libs 2.0.14-5.el8
rocky/java-11-openjdk-devel 11.0.17.0.8-2.el8_6
rocky/java-11-openjdk-headless 11.0.17.0.8-2.el8_6
rocky/java-11-openjdk 11.0.17.0.8-2.el8_6
rocky/javapackages-filesystem 5.3.0-2.module el8.3.0 125 5da1ae29
rocky/jbig2dec-libs 0.16-1.el8
rocky/jbigkit-libs 2.1-14.el8
rocky/json-c 0.13.1-3.el8
rocky/json-glib-devel 1.4.4-1.el8
rocky/json-glib 1.4.4-1.el8
rocky/kbd-legacy 2.0.4-10.el8
rocky/kbd-misc 2.0.4-10.el8
rocky/kbd 2.0.4-10.el8
rocky/kernel-headers 4.18.0-425.3.1.el8
rocky/kernel-tools-libs 4.18.0-425.3.1.el8
rocky/kernel-tools 4.18.0-425.3.1.el8
rocky/kexec-tools 2.0.24-6.el8
rocky/keyutils-libs-devel 1.5.10-9.el8
rocky/keyutils-libs 1.5.10-9.el8
rocky/kmod-libs 25-19.el8
rocky/kmod 25-19.el8
rocky/kpartx 0.8.4-28.el8_7.1
rocky/krb5-devel 1.18.2-22.el8_7
rocky/krb5-libs 1.18.2-22.el8_7
rocky/lcms2 2.9-2.el8
rocky/less 530-1.el8
rocky/libICE-devel 1.0.9-15.el8
rocky/libICE 1.0.9-15.el8
rocky/libSM-devel 1.2.3-1.el8
rocky/libSM 1.2.3-1.el8
rocky/libX11-common 1.6.8-5.el8
rocky/libX11-devel 1.6.8-5.el8
rocky/libX11-xcb 1.6.8-5.el8
rocky/libX11 1.6.8-5.el8
rocky/libXau-devel 1.0.9-3.el8
rocky/libXau 1.0.9-3.el8
rocky/libXaw 1.0.13-10.el8
rocky/libXcomposite 0.4.4-14.el8
rocky/libXcursor 1.1.15-3.el8
rocky/libXdamage 1.1.4-14.el8
rocky/libXext-devel 1.3.4-1.el8
rocky/libXext 1.3.4-1.el8
rocky/libXfixes 5.0.3-7.el8
rocky/libXfont2-devel 2.0.3-2.el8
rocky/libXfont2 2.0.3-2.el8
rocky/libXft-devel 2.3.3-1.el8
rocky/libXft 2.3.3-1.el8
rocky/libXi 1.7.10-1.el8
rocky/libXinerama 1.1.4-1.el8
rocky/libXmu 1.1.3-1.el8
rocky/libXpm 3.5.12-8.el8
rocky/libXrandr 1.5.2-1.el8
rocky/libXrender-devel 0.9.10-7.el8
rocky/libXrender 0.9.10-7.el8
rocky/libXt-devel 1.1.5-12.el8
rocky/libXt 1.1.5-12.el8
rocky/libXtst 1.2.3-7.el8
rocky/libXxf86misc 1.0.4-1.el8
rocky/libXxf86vm 1.1.4-9.el8
rocky/libacl 2.2.53-1.el8.1
rocky/libaec-devel 1.0.2-3.el8
rocky/libaec 1.0.2-3.el8
rocky/libarchive 3.3.3-4.el8
rocky/libassuan 2.5.1-3.el8
rocky/libattr 2.4.48-3.el8
rocky/libbasicobjects 0.1.1-40.el8
rocky/libblkid 2.32.1-38.el8
rocky/libbpf 0.5.0-1.el8
rocky/libcap-ng 0.7.11-1.el8
rocky/libcap 2.48-4.el8
rocky/libcollection 0.7.0-40.el8
rocky/libcom_err-devel 1.45.6-5.el8
rocky/libcom_err 1.45.6-5.el8
rocky/libcomps 0.1.18-1.el8
rocky/libcroco 0.6.12-4.el8_2.1
rocky/libcurl-devel 7.61.1-25.el8
rocky/libcurl 7.61.1-25.el8
rocky/libdaemon 0.14-15.el8
rocky/libdatrie 0.2.9-7.el8
rocky/libdb-utils 5.3.28-42.el8_4
rocky/libdb 5.3.28-42.el8_4
rocky/libdhash 0.5.0-40.el8
rocky/libdnf 0.63.0-11.1.el8
rocky/libdrm-devel 2.4.111-1.el8
rocky/libdrm 2.4.111-1.el8
rocky/libedit 3.1-23.20170329cvs.el8
rocky/libepoxy 1.5.8-1.el8
rocky/libestr 0.1.10-3.el8
rocky/libevent 2.1.8-5.el8
rocky/libfabric 1.15.1-1.el8
rocky/libfastjson 0.99.9-1.el8
rocky/libfdisk 2.32.1-38.el8
rocky/libffi 3.1-23.el8
rocky/libfontenc-devel 1.1.3-8.el8
rocky/libfontenc 1.1.3-8.el8
rocky/libgcc 8.5.0-15.el8
rocky/libgcrypt 1.8.5-7.el8_6
rocky/libgfortran 8.5.0-15.el8
rocky/libglvnd-core-devel 1.3.4-1.el8
rocky/libglvnd-devel 1.3.4-1.el8
rocky/libglvnd-egl 1.3.4-1.el8
rocky/libglvnd-gles 1.3.4-1.el8
rocky/libglvnd-glx 1.3.4-1.el8
rocky/libglvnd-opengl 1.3.4-1.el8
rocky/libglvnd 1.3.4-1.el8
rocky/libgomp 8.5.0-15.el8
rocky/libgpg-error 1.31-1.el8
rocky/libgs 9.27-4.el8
rocky/libgusb 0.3.0-1.el8
rocky/libibumad 41.0-1.el8
rocky/libibverbs 41.0-1.el8
rocky/libidn2 2.2.0-1.el8
rocky/libidn 1.34-5.el8
rocky/libijs 0.35-5.el8
rocky/libini_config 1.3.1-40.el8
rocky/libjpeg-turbo-devel 1.5.3-12.el8
rocky/libjpeg-turbo 1.5.3-12.el8
rocky/libkadm5 1.18.2-22.el8_7
rocky/libkcapi-hmaccalc 1.2.0-2.el8
rocky/libkcapi 1.2.0-2.el8
rocky/libksba 1.3.5-8.el8_6
rocky/libldb 2.5.2-2.el8
rocky/libmcpp 2.7.2-20.el8
rocky/libmetalink 0.1.3-7.el8
rocky/libmnl 1.0.4-6.el8
rocky/libmodman 2.0.1-17.el8
rocky/libmodulemd 2.13.0-1.el8
rocky/libmount 2.32.1-38.el8
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