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tabbzi/terra-dogagingproject-genomic-reports : latest
Low-pass sequencing data processing for the Dog Aging Project
Ubuntu 20.04.3 LTS
Latest release: almost 3 years ago - 32,224 downloads - 664 dependencies
JSONDependencies
- KernSmooth 2.23-16
- MASS 7.3-51.5
- Matrix 1.2-18
- ModelMetrics 1.2.2.2
- R6 2.5.1
- RColorBrewer 1.1-2
- Rcpp 1.0.7
- SQUAREM 2021.1
- base 3.6.3
- boot 1.3-24
- caret 6.0-90
- class 7.3-15
- cli 3.1.0
- cluster 2.1.0
- codetools 0.2-16
- colorspace 2.0-2
- compiler 3.6.3
- cpp11 0.4.2
- crayon 1.4.2
- data.table 1.14.2
- datasets 3.6.3
- digest 0.6.29
- dplyr 1.0.7
- e1071 1.7-9
- ellipsis 0.3.2
- fansi 0.5.0
- farver 2.1.0
- foreach 1.5.1
- foreign 0.8-75
- future.apply 1.8.1
- future 1.23.0
- generics 0.1.1
- ggplot2 3.3.5
- globals 0.14.0
- glue 1.5.1
- gower 0.2.2
- grDevices 3.6.3
- graphics 3.6.3
- grid 3.6.3
- gtable 0.3.0
- ipred 0.9-12
- isoband 0.2.5
- iterators 1.0.13
- labeling 0.4.2
- lattice 0.20-40
- lava 1.6.10
- lifecycle 1.0.1
- listenv 0.8.0
- lubridate 1.8.0
- magrittr 2.0.1
- methods 3.6.3
- mgcv 1.8-31
- munsell 0.5.0
- nlme 3.1-144
- nnet 7.3-13
- numDeriv 2016.8-1.1
- pROC 1.18.0
- parallel 3.6.3
- parallelly 1.29.0
- pillar 1.6.4
- pkgconfig 2.0.3
- plyr 1.8.6
- prodlim 2019.11.13
- progressr 0.9.0
- proxy 0.4-26
- purrr 0.3.4
- randomForest 4.6-14
- recipes 0.1.17
- reshape2 1.4.4
- rlang 0.4.12
- rpart 4.1-15
- scales 1.1.1
- spatial 7.3-11
- splines 3.6.3
- stats4 3.6.3
- stats 3.6.3
- stringi 1.7.6
- stringr 1.4.0
- survival 3.1-8
- tcltk 3.6.3
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tibble 3.1.6
- tidyr 1.1.4
- tidyselect 1.1.1
- timeDate 3043.102
- tools 3.6.3
- translations 3.6.3
- utf8 1.2.2
- utils 3.6.3
- vctrs 0.3.8
- viridisLite 0.4.0
- withr 2.4.3
- ubuntu/adduser 3.118ubuntu2
- ubuntu/apt 2.0.6
- ubuntu/autoconf 2.69-11.1
- ubuntu/automake 1:1.16.1-4ubuntu6
- ubuntu/autotools-dev 20180224.1
- ubuntu/base-files 11ubuntu5.4
- ubuntu/base-passwd 3.5.47
- ubuntu/bash 5.0-6ubuntu1.1
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- ubuntu/binutils 2.34-6ubuntu1.3
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.1
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- ubuntu/ca-certificates 20210119~20.04.2
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- ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.1
- ubuntu/tzdata 2021e-0ubuntu0.20.04
- ubuntu/ubuntu-keyring 2020.02.11.4
- ubuntu/ucf 3.0038 nmu1
- ubuntu/unattended-upgrades 2.3ubuntu0.1
- ubuntu/unzip 6.0-25ubuntu1
- ubuntu/util-linux 2.34-0.1ubuntu9.1
- ubuntu/vim-common 2:8.1.2269-1ubuntu5.4
- ubuntu/vim-runtime 2:8.1.2269-1ubuntu5.4
- ubuntu/vim 2:8.1.2269-1ubuntu5.4
- ubuntu/wget 1.20.3-1ubuntu2
- ubuntu/x11-common 1:7.7 19ubuntu14
- ubuntu/xdg-utils 1.1.3-2ubuntu1.20.04.2
- ubuntu/xxd 2:8.1.2269-1ubuntu5.4
- ubuntu/xz-utils 5.2.4-1ubuntu1
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.2
- ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.2
- bash 5.0.17
- anthoscli (devel)
- cloud.google.com/go/bigtable v1.1.0
- cloud.google.com/go/storage v1.0.0
- cloud.google.com/go v0.50.0
- github.com/Azure/go-autorest/autorest/adal v0.9.16
- github.com/Azure/go-autorest/autorest/date v0.3.0
- github.com/Azure/go-autorest/autorest v0.11.21
- github.com/Azure/go-autorest/logger v0.2.1
- github.com/Azure/go-autorest/tracing v0.6.0
- github.com/BurntSushi/toml v0.3.1
- github.com/Masterminds/goutils v1.1.0
- github.com/Masterminds/semver/v3 v3.1.0
- github.com/Masterminds/sprig/v3 v3.1.0
- github.com/PuerkitoBio/purell v1.1.1
- github.com/PuerkitoBio/urlesc v0.0.0-20170810143723-de5bf2ad4578
- github.com/VividCortex/ewma v1.1.1
- github.com/agext/levenshtein v1.2.2
- github.com/apparentlymart/go-cidr v1.0.1
- github.com/apparentlymart/go-textseg/v12 v12.0.0
- github.com/apparentlymart/go-textseg v1.0.0
- github.com/armon/go-radix v1.0.0
- github.com/aws/aws-sdk-go v1.25.3
- github.com/bgentry/go-netrc v0.0.0-20140422174119-9fd32a8b3d3d
- github.com/bgentry/speakeasy v0.1.0
- github.com/census-instrumentation/opencensus-proto v0.2.1
- github.com/cheggaaa/pb/v3 v3.0.4
- github.com/cncf/udpa/go v0.0.0-20200313221541-5f7e5dd04533
- github.com/cpuguy83/go-md2man/v2 v2.0.0
- github.com/cyphar/filepath-securejoin v0.2.2
- github.com/davecgh/go-spew v1.1.1
- github.com/docker/distribution v2.7.1 incompatible
- github.com/dsnet/compress v0.0.1
- github.com/envoyproxy/go-control-plane v0.9.5-0.20200326174812-e8bd2869ff56
- github.com/envoyproxy/protoc-gen-validate v0.1.0
- github.com/evanphx/json-patch v4.5.0 incompatible
- github.com/fatih/color v1.7.0
- github.com/fsnotify/fsnotify v1.4.7
- github.com/gammazero/deque v0.0.0-20190521012701-46e4ffb7a622
- github.com/gammazero/workerpool v0.0.0-20190608213748-0ed5e40ec55e
- github.com/ghodss/yaml v1.0.0
- github.com/go-errors/errors v1.0.1
- github.com/go-openapi/jsonpointer v0.19.3
- github.com/go-openapi/jsonreference v0.19.3
- github.com/go-openapi/spec v0.19.5
- github.com/go-openapi/swag v0.19.6
- github.com/gobwas/glob v0.2.3
- github.com/gogo/protobuf v1.3.1
- github.com/golang-jwt/jwt/v4 v4.0.0
- github.com/golang/glog v0.0.0-20160126235308-23def4e6c14b
- github.com/golang/groupcache v0.0.0-20191027212112-611e8accdfc9
- github.com/golang/protobuf v1.3.5
- github.com/golang/snappy v0.0.1
- github.com/google/go-cmp v0.4.0
- github.com/google/gofuzz v1.1.0
- github.com/google/uuid v1.1.1
- github.com/googleapis/gax-go/v2 v2.0.5
- github.com/googleapis/gnostic v0.3.1
- github.com/gophercloud/gophercloud v0.1.0
- github.com/hashicorp/errwrap v1.0.0
- github.com/hashicorp/go-cleanhttp v0.5.1
- github.com/hashicorp/go-getter v1.4.0
- github.com/hashicorp/go-hclog v0.9.2
- github.com/hashicorp/go-multierror v1.0.0
- github.com/hashicorp/go-plugin v1.0.1
- github.com/hashicorp/go-safetemp v1.0.0
- github.com/hashicorp/go-uuid v1.0.1
- github.com/hashicorp/go-version v1.2.0
- github.com/hashicorp/hcl/v2 v2.0.0
- github.com/hashicorp/hcl v1.0.0
- github.com/hashicorp/logutils v1.0.0
- github.com/hashicorp/terraform-config-inspect v0.0.0-20191115094559-17f92b0546e8
- github.com/hashicorp/terraform-plugin-sdk v1.4.0
- github.com/hashicorp/terraform-svchost v0.0.0-20191011084731-65d371908596
- github.com/hashicorp/yamux v0.0.0-20181012175058-2f1d1f20f75d
- github.com/huandu/xstrings v1.3.1
- github.com/imdario/mergo v0.3.8
- github.com/jmespath/go-jmespath v0.0.0-20180206201540-c2b33e8439af
- github.com/json-iterator/go v1.1.9
- github.com/kr/pretty v0.1.0
- github.com/kr/text v0.1.0
- github.com/kylelemons/godebug v1.1.0
- github.com/mailru/easyjson v0.7.0
- github.com/mattn/go-colorable v0.1.2
- github.com/mattn/go-isatty v0.0.12
- github.com/mattn/go-runewidth v0.0.7
- github.com/mholt/archiver v3.1.1 incompatible
- github.com/mitchellh/cli v1.0.0
- github.com/mitchellh/colorstring v0.0.0-20190213212951-d06e56a500db
- github.com/mitchellh/copystructure v1.0.0
- github.com/mitchellh/go-homedir v1.1.0
- github.com/mitchellh/go-testing-interface v1.0.0
- github.com/mitchellh/go-wordwrap v1.0.0
- github.com/mitchellh/hashstructure v1.0.0
- github.com/mitchellh/mapstructure v1.1.2
- github.com/mitchellh/reflectwalk v1.0.1
- github.com/modern-go/concurrent v0.0.0-20180306012644-bacd9c7ef1dd
- github.com/modern-go/reflect2 v1.0.1
- github.com/natefinch/lumberjack v2.0.0 incompatible
- github.com/nwaples/rardecode v1.0.0
- github.com/oklog/run v1.0.0
- github.com/olekukonko/tablewriter v0.0.4
- github.com/opencontainers/go-digest v1.0.0-rc1
- github.com/pierrec/lz4 v2.2.7 incompatible
- github.com/pkg/errors v0.9.1
- github.com/posener/complete/v2 v2.0.1-alpha.12
- github.com/posener/complete v1.2.1
- github.com/posener/script v1.0.4
- github.com/prometheus/client_model v0.2.0
- github.com/russross/blackfriday/v2 v2.0.1
- github.com/shurcooL/sanitized_anchor_name v1.0.0
- github.com/spf13/afero v1.2.2
- github.com/spf13/cast v1.3.1
- github.com/spf13/cobra v1.0.0
- github.com/spf13/pflag v1.0.5
- github.com/stoewer/go-strcase v1.0.2
- github.com/ulikunitz/xz v0.5.6
- github.com/vmihailenco/msgpack v4.0.4 incompatible
- github.com/xeipuuv/gojsonpointer v0.0.0-20190905194746-02993c407bfb
- github.com/xeipuuv/gojsonreference v0.0.0-20180127040603-bd5ef7bd5415
- github.com/xeipuuv/gojsonschema v1.1.0
- github.com/xi2/xz v0.0.0-20171230120015-48954b6210f8
- github.com/xlab/treeprint v0.0.0-20181112141820-a009c3971eca
- github.com/zclconf/go-cty-yaml v1.0.1
- github.com/zclconf/go-cty v1.4.0
- go.opencensus.io v0.22.2
- go.uber.org/atomic v1.4.0
- go.uber.org/multierr v1.1.0
- go.uber.org/zap v1.10.0
- golang.org/x/crypto v0.0.0-20201002170205-7f63de1d35b0
- golang.org/x/net v0.0.0-20191014212845-da9a3fd4c582
- golang.org/x/oauth2 v0.0.0-20190604053449-0f29369cfe45
- golang.org/x/sys v0.0.0-20200116001909-b77594299b42
- golang.org/x/text v0.3.2
- golang.org/x/time v0.0.0-20190921001708-c4c64cad1fd0
- golang.org/x/xerrors v0.0.0-20191204190536-9bdfabe68543
- google.golang.org/api v0.22.0
- google.golang.org/genproto v0.0.0-20191223191004-3caeed10a8bf
- google.golang.org/grpc v1.28.1
- gopkg.in/inf.v0 v0.9.1
- gopkg.in/yaml.v2 v2.2.8
- gopkg.in/yaml.v3 v3.0.0-20191026110619-0b21df46bc1d
- helm.sh/helm/v3 v3.2.0
- istio.io/api v0.0.0-20200724154434-34e474846e0d
- istio.io/gogo-genproto v0.0.0-20200709220749-8607e17318e8
- istio.io/pkg v0.0.0-20200709220414-14d5de656564
- k8s.io/api v0.18.3
- k8s.io/apiextensions-apiserver v0.18.2
- k8s.io/apimachinery v0.18.3
- k8s.io/client-go v0.18.3
- k8s.io/klog v1.0.0
- k8s.io/kube-openapi v0.0.0-20200410145947-61e04a5be9a6
- k8s.io/kubectl v0.18.0
- k8s.io/utils v0.0.0-20200324210504-a9aa75ae1b89
- sigs.k8s.io/controller-runtime v0.6.0
- sigs.k8s.io/kustomize/kyaml v0.0.5
- sigs.k8s.io/structured-merge-diff/v3 v3.0.0
- sigs.k8s.io/yaml v1.2.0
- stdlib 1.16.7
- argparse 1.2.1
- flake8 3.4.1
- future 0.16.0
- mock 2.0.0
- pyasn1 0.4.4
- pytest-cov 2.5.1
- pytest-forked 0.2
- pytest-randomly 1.2.1
- pytest-timeout 1.2.0
- pytest-xdist 1.20.0
- pytest 3.2.1
- rsa 3.1.4
- rsa 4.7.2
- simplejson 3.5.2
- simplejson 3.6.5
- six 1.10.0