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intelliseqngs/annotsv : GRCh38_1.0.0

Latest release: almost 5 years ago - 491 downloads - 392 dependencies

JSON

Dependencies

ubuntu/adduser 3.118ubuntu1
ubuntu/apt 1.9.4
ubuntu/base-files 10.2ubuntu7.19.10.0
ubuntu/base-passwd 3.5.46
ubuntu/bash 5.0-4ubuntu1
ubuntu/bedtools 2.27.1 dfsg-4
ubuntu/binutils-common 2.33-2ubuntu1.2
ubuntu/binutils-x86-64-linux-gnu 2.33-2ubuntu1.2
ubuntu/binutils 2.33-2ubuntu1.2
ubuntu/bsdutils 1:2.34-0.1ubuntu2.4
ubuntu/build-essential 12.8ubuntu1
ubuntu/bzip2 1.0.6-9.2
ubuntu/ca-certificates 20190110
ubuntu/coreutils 8.30-3ubuntu2
ubuntu/cpp-9 9.2.1-9ubuntu2
ubuntu/cpp 4:9.2.1-3.1ubuntu1
ubuntu/cron 3.0pl1-134ubuntu1
ubuntu/curl 7.65.3-1ubuntu3
ubuntu/dash 0.5.10.2-6
ubuntu/dbus 1.12.14-1ubuntu2
ubuntu/debconf 1.5.73
ubuntu/debianutils 4.8.6.3
ubuntu/dh-python 4.20190722ubuntu1
ubuntu/diffutils 1:3.7-3
ubuntu/dirmngr 2.2.12-1ubuntu3
ubuntu/dpkg-dev 1.19.7ubuntu2
ubuntu/dpkg 1.19.7ubuntu2
ubuntu/e2fsprogs 1.45.3-4ubuntu2.1
ubuntu/fakeroot 1.24-1
ubuntu/fdisk 2.34-0.1ubuntu2.4
ubuntu/file 1:5.37-5ubuntu0.1
ubuntu/findutils 4.6.0 git 20190209-2ubuntu1
ubuntu/g -9 9.2.1-9ubuntu2
ubuntu/g 4:9.2.1-3.1ubuntu1
ubuntu/gawk 1:4.2.1 dfsg-1.1build1
ubuntu/gcc-9-base 9.2.1-9ubuntu2
ubuntu/gcc-9 9.2.1-9ubuntu2
ubuntu/gcc 4:9.2.1-3.1ubuntu1
ubuntu/gir1.2-glib-2.0 1.62.0-1
ubuntu/git-man 1:2.20.1-2ubuntu1.19.10.1
ubuntu/git 1:2.20.1-2ubuntu1.19.10.1
ubuntu/gnupg-l10n 2.2.12-1ubuntu3
ubuntu/gnupg-utils 2.2.12-1ubuntu3
ubuntu/gnupg 2.2.12-1ubuntu3
ubuntu/gpg-agent 2.2.12-1ubuntu3
ubuntu/gpg-wks-client 2.2.12-1ubuntu3
ubuntu/gpg-wks-server 2.2.12-1ubuntu3
ubuntu/gpg 2.2.12-1ubuntu3
ubuntu/gpgconf 2.2.12-1ubuntu3
ubuntu/gpgsm 2.2.12-1ubuntu3
ubuntu/gpgv 2.2.12-1ubuntu3
ubuntu/grep 3.3-1build1
ubuntu/gzip 1.10-0ubuntu3.1
ubuntu/hostname 3.22
ubuntu/init-system-helpers 1.57
ubuntu/iproute2 5.2.0-1ubuntu2
ubuntu/jo 1.1-1
ubuntu/jq 1.5 dfsg-2build1
ubuntu/krb5-locales 1.17-6
ubuntu/less 487-0.1build1
ubuntu/libacl1 2.2.53-4
ubuntu/libalgorithm-diff-perl 1.19.03-2
ubuntu/libalgorithm-diff-xs-perl 0.04-5build1
ubuntu/libalgorithm-merge-perl 0.08-3
ubuntu/libapparmor1 2.13.3-5ubuntu1
ubuntu/libapt-pkg5.90 1.9.4
ubuntu/libasan5 9.2.1-9ubuntu2
ubuntu/libasn1-8-heimdal 7.5.0 dfsg-3build1
ubuntu/libassuan0 2.5.3-7ubuntu1
ubuntu/libatm1 1:2.5.1-4
ubuntu/libatomic1 9.2.1-9ubuntu2
ubuntu/libattr1 1:2.4.48-4
ubuntu/libaudit-common 1:2.8.5-2ubuntu1
ubuntu/libaudit1 1:2.8.5-2ubuntu1
ubuntu/libbinutils 2.33-2ubuntu1.2
ubuntu/libblkid1 2.34-0.1ubuntu2.4
ubuntu/libbsd0 0.10.0-1
ubuntu/libbz2-1.0 1.0.6-9.2
ubuntu/libc-bin 2.30-0ubuntu2.1
ubuntu/libc-dev-bin 2.30-0ubuntu2.1
ubuntu/libc6-dev 2.30-0ubuntu2.1
ubuntu/libc6 2.30-0ubuntu2.1
ubuntu/libcap-ng0 0.7.9-2
ubuntu/libcap2-bin 1:2.25-2
ubuntu/libcap2 1:2.25-2
ubuntu/libcc1-0 9.2.1-9ubuntu2
ubuntu/libcom-err2 1.45.3-4ubuntu2.1
ubuntu/libcurl3-gnutls 7.65.3-1ubuntu3
ubuntu/libcurl4 7.65.3-1ubuntu3
ubuntu/libdb5.3 5.3.28 dfsg1-0.6ubuntu1
ubuntu/libdbus-1-3 1.12.14-1ubuntu2
ubuntu/libdebconfclient0 0.249ubuntu1
ubuntu/libdeflate0 1.2-1
ubuntu/libdpkg-perl 1.19.7ubuntu2
ubuntu/libedit2 3.1-20190324-1
ubuntu/libelf1 0.176-1.1
ubuntu/liberror-perl 0.17028-1
ubuntu/libexpat1-dev 2.2.7-2
ubuntu/libexpat1 2.2.7-2
ubuntu/libext2fs2 1.45.3-4ubuntu2.1
ubuntu/libfakeroot 1.24-1
ubuntu/libfdisk1 2.34-0.1ubuntu2.4
ubuntu/libffi6 3.2.1-9
ubuntu/libfile-fcntllock-perl 0.22-3build3
ubuntu/libgcc-9-dev 9.2.1-9ubuntu2
ubuntu/libgcc1 1:9.2.1-9ubuntu2
ubuntu/libgcrypt20 1.8.4-5ubuntu2.1
ubuntu/libgdbm-compat4 1.18.1-5
ubuntu/libgdbm6 1.18.1-5
ubuntu/libx11-6 2:1.6.8-1
ubuntu/libgirepository-1.0-1 1.62.0-1
ubuntu/libglib2.0-0 2.62.4-1~ubuntu19.10.2
ubuntu/libglib2.0-data 2.62.4-1~ubuntu19.10.2
ubuntu/libgmp10 2:6.1.2 dfsg-4
ubuntu/libgnutls30 3.6.9-5ubuntu1
ubuntu/libgomp1 9.2.1-9ubuntu2
ubuntu/libgpg-error0 1.36-7
ubuntu/libgssapi-krb5-2 1.17-6
ubuntu/libgssapi3-heimdal 7.5.0 dfsg-3build1
ubuntu/libhcrypto4-heimdal 7.5.0 dfsg-3build1
ubuntu/libheimbase1-heimdal 7.5.0 dfsg-3build1
ubuntu/libheimntlm0-heimdal 7.5.0 dfsg-3build1
ubuntu/libhogweed4 3.4.1-1
ubuntu/libhx509-5-heimdal 7.5.0 dfsg-3build1
ubuntu/libicu63 63.2-2ubuntu0.1
ubuntu/libidn2-0 2.2.0-2
ubuntu/libisl21 0.21-2
ubuntu/libitm1 9.2.1-9ubuntu2
ubuntu/libjq1 1.5 dfsg-2build1
ubuntu/libk5crypto3 1.17-6
ubuntu/libkeyutils1 1.6-6
ubuntu/libkrb5-26-heimdal 7.5.0 dfsg-3build1
ubuntu/libkrb5-3 1.17-6
ubuntu/libkrb5support0 1.17-6
ubuntu/libksba8 1.3.5-2
ubuntu/libldap-2.4-2 2.4.48 dfsg-1ubuntu1
ubuntu/libldap-common 2.4.48 dfsg-1ubuntu1
ubuntu/liblocale-gettext-perl 1.07-3build3
ubuntu/liblsan0 9.2.1-9ubuntu2
ubuntu/liblz4-1 1.9.1-1
ubuntu/liblzma5 5.2.4-1
ubuntu/libmagic-mgc 1:5.37-5ubuntu0.1
ubuntu/libmagic1 1:5.37-5ubuntu0.1
ubuntu/libmnl0 1.0.4-2
ubuntu/libmount1 2.34-0.1ubuntu2.4
ubuntu/libmpc3 1.1.0-1
ubuntu/libmpdec2 2.4.2-2
ubuntu/libmpfr6 4.0.2-1
ubuntu/libncurses6 6.1 20190803-1ubuntu1
ubuntu/libncursesw6 6.1 20190803-1ubuntu1
ubuntu/libnettle6 3.4.1-1
ubuntu/libnghttp2-14 1.39.2-1
ubuntu/libnpth0 1.6-1
ubuntu/libonig5 6.9.2-1
ubuntu/libp11-kit0 0.23.17-2
ubuntu/libpam-cap 1:2.25-2
ubuntu/libpam-modules-bin 1.3.1-5ubuntu1.19.10.1
ubuntu/libpam-modules 1.3.1-5ubuntu1.19.10.1
ubuntu/libpam-runtime 1.3.1-5ubuntu1.19.10.1
ubuntu/libpam0g 1.3.1-5ubuntu1.19.10.1
ubuntu/libpcre2-8-0 10.32-5
ubuntu/libpcre3 2:8.39-12
ubuntu/libperl5.28 5.28.1-6build1
ubuntu/libprocps7 2:3.3.15-2ubuntu3
ubuntu/libpsl5 0.20.2-2
ubuntu/libpython3-dev 3.7.5-1
ubuntu/libpython3-stdlib 3.7.5-1
ubuntu/libpython3.7-dev 3.7.5~rc1-2
ubuntu/libpython3.7-minimal 3.7.5~rc1-2
ubuntu/libpython3.7-stdlib 3.7.5~rc1-2
ubuntu/libpython3.7 3.7.5~rc1-2
ubuntu/libquadmath0 9.2.1-9ubuntu2
ubuntu/libreadline8 8.0-3
ubuntu/libroken18-heimdal 7.5.0 dfsg-3build1
ubuntu/librtmp1 2.4 20151223.gitfa8646d.1-2
ubuntu/libsasl2-2 2.1.27 dfsg-1ubuntu0.1
ubuntu/libsasl2-modules-db 2.1.27 dfsg-1ubuntu0.1
ubuntu/libsasl2-modules 2.1.27 dfsg-1ubuntu0.1
ubuntu/libseccomp2 2.4.1-0ubuntu0.19.10.3
ubuntu/libselinux1 2.9-2
ubuntu/libsemanage-common 2.9-3
ubuntu/libsemanage1 2.9-3
ubuntu/libsensors-config 1:3.5.0-3ubuntu1
ubuntu/libsensors5 1:3.5.0-3ubuntu1
ubuntu/libsepol1 2.9-2
ubuntu/libsigsegv2 2.12-2
ubuntu/libsmartcols1 2.34-0.1ubuntu2.4
ubuntu/libsqlite3-0 3.29.0-2ubuntu0.2
ubuntu/libss2 1.45.3-4ubuntu2.1
ubuntu/libssh-4 0.9.0-1ubuntu1.3
ubuntu/libssl1.1 1.1.1c-1ubuntu4
ubuntu/libstdc -9-dev 9.2.1-9ubuntu2
ubuntu/libstdc 6 9.2.1-9ubuntu2
ubuntu/libsystemd0 242-7ubuntu3.7
ubuntu/libtasn1-6 4.14-3
ubuntu/libtcl8.6 8.6.9 dfsg-2
ubuntu/libtinfo6 6.1 20190803-1ubuntu1
ubuntu/libtsan0 9.2.1-9ubuntu2
ubuntu/libubsan1 9.2.1-9ubuntu2
ubuntu/libudev1 242-7ubuntu3.7
ubuntu/libunistring2 0.9.10-2
ubuntu/libuuid1 2.34-0.1ubuntu2.4
ubuntu/libwind0-heimdal 7.5.0 dfsg-3build1
ubuntu/libx11-data 2:1.6.8-1
ubuntu/libxau6 1:1.0.9-0ubuntu1
ubuntu/libxcb1 1.13.1-2
ubuntu/libxdmcp6 1:1.1.3-0ubuntu1
ubuntu/libxext6 2:1.3.4-0ubuntu1
ubuntu/libxml2 2.9.4 dfsg1-7ubuntu3.1
ubuntu/libxmuu1 2:1.1.3-0ubuntu1
ubuntu/libxtables12 1.8.3-2ubuntu5
ubuntu/libzstd1 1.4.3 dfsg-1
ubuntu/linux-libc-dev 5.3.0-45.37
ubuntu/locales 2.30-0ubuntu2.1
ubuntu/login 1:4.5-1.1ubuntu4
ubuntu/logsave 1.45.3-4ubuntu2.1
ubuntu/lsb-base 11.0.1ubuntu1
ubuntu/make 4.2.1-1.2
ubuntu/manpages-dev 5.02-1
ubuntu/manpages 5.02-1
ubuntu/mawk 1.3.3-17ubuntu3
ubuntu/mime-support 3.63ubuntu1
ubuntu/mount 2.34-0.1ubuntu2.4
ubuntu/ncurses-base 6.1 20190803-1ubuntu1
ubuntu/ncurses-bin 6.1 20190803-1ubuntu1
ubuntu/netbase 5.6
ubuntu/openssh-client 1:8.0p1-6build1
ubuntu/openssl 1.1.1c-1ubuntu4
ubuntu/parallel 20161222-1.1
ubuntu/passwd 1:4.5-1.1ubuntu4
ubuntu/patch 2.7.6-6
ubuntu/perl-base 5.28.1-6build1
ubuntu/perl-modules-5.28 5.28.1-6build1
ubuntu/perl 5.28.1-6build1
ubuntu/pinentry-curses 1.1.0-3
ubuntu/procps 2:3.3.15-2ubuntu3
ubuntu/publicsuffix 20190723.1836-1
ubuntu/python-pip-whl 18.1-5
ubuntu/python3-asn1crypto 0.24.0-1
ubuntu/python3-cffi-backend 1.12.3-1build1
ubuntu/python3-crypto 2.6.1-10
ubuntu/python3-cryptography 2.6.1-3.1
ubuntu/python3-dbus 1.2.12-1
ubuntu/python3-dev 3.7.5-1
ubuntu/python3-distutils 3.7.5-1build1
ubuntu/python3-entrypoints 0.3-1
ubuntu/python3-gi 3.34.0-1
ubuntu/python3-keyring 18.0.1-1ubuntu1
ubuntu/python3-keyrings.alt 3.1.1-1
ubuntu/python3-lib2to3 3.7.5-1build1
ubuntu/python3-minimal 3.7.5-1
ubuntu/python3-pip 18.1-5
ubuntu/python3-pkg-resources 41.1.0-1
ubuntu/python3-secretstorage 2.3.1-2
ubuntu/python3-setuptools 41.1.0-1
ubuntu/python3-six 1.12.0-2
ubuntu/python3-wheel 0.32.3-2
ubuntu/python3-xdg 0.25-5
ubuntu/python3.7-dev 3.7.5~rc1-2
ubuntu/python3.7-minimal 3.7.5~rc1-2
ubuntu/python3.7 3.7.5~rc1-2
ubuntu/python3 3.7.5-1
ubuntu/readline-common 8.0-3
ubuntu/sed 4.7-1
ubuntu/sensible-utils 0.0.12
ubuntu/shared-mime-info 1.10-1
ubuntu/sysstat 12.0.6-1ubuntu0.1
ubuntu/sysvinit-utils 2.95-5ubuntu2
ubuntu/tabix 1.9-10
ubuntu/tar 1.30 dfsg-6
ubuntu/tcl8.6-dev 8.6.9 dfsg-2
ubuntu/tcl8.6 8.6.9 dfsg-2
ubuntu/tcl 8.6.9 1
ubuntu/tcllib 1.19-dfsg-2
ubuntu/tzdata 2019c-3
ubuntu/ubuntu-keyring 2018.09.18.1
ubuntu/ucf 3.0038 nmu1
ubuntu/unzip 6.0-25ubuntu1
ubuntu/util-linux 2.34-0.1ubuntu2.4
ubuntu/uuid-runtime 2.34-0.1ubuntu2.4
ubuntu/wget 1.20.3-1ubuntu1
ubuntu/xauth 1:1.1-0ubuntu1
ubuntu/xdg-user-dirs 0.17-2ubuntu1
ubuntu/xz-utils 5.2.4-1
ubuntu/zlib1g-dev 1:1.2.11.dfsg-1ubuntu3
ubuntu/zlib1g 1:1.2.11.dfsg-1ubuntu3

bash 5.0.3
java 12.0.1 12

CodePointIM:CodePointIM 12.0.1
FileChooserDemo:FileChooserDemo 12.0.1
J2Ddemo:J2Ddemo 12.0.1
Metalworks:Metalworks 12.0.1
Notepad:Notepad 12.0.1
SampleTree:SampleTree 12.0.1
Stylepad:Stylepad 12.0.1
SwingSet2:SwingSet2 12.0.1
TableExample:TableExample 12.0.1
TransparentRuler:TransparentRuler 12.0.1
ch.qos.logback:logback-classic 1.2.3
ch.qos.logback:logback-core 1.2.3
com.fasterxml.jackson.core:jackson-annotations 2.9.0
com.fasterxml.jackson.core:jackson-core 2.9.8
com.fasterxml.jackson.core:jackson-databind 2.9.8
com.fasterxml.jackson.dataformat:jackson-dataformat-protobuf 2.9.8
org.slf4j:jul-to-slf4j 1.7.25
com.fasterxml.jackson.dataformat:jackson-dataformat-yaml 2.9.8
com.fasterxml.jackson.datatype:jackson-datatype-jdk7 2.6.7
com.fasterxml.jackson.datatype:jackson-datatype-jdk8 2.9.8
com.fasterxml.jackson.datatype:jackson-datatype-jsr310 2.9.8
com.fasterxml.jackson.module:jackson-module-parameter-names 2.9.8
com.fasterxml:classmate 1.4.0
com.google.code.gson:gson 2.8.5
com.google.errorprone:error_prone_annotations 2.0.18
com.google.guava:guava 22.0
com.google.j2objc:j2objc-annotations 1.1
com.google.protobuf:protobuf-java-util 3.7.0
com.google.protobuf:protobuf-java 3.7.0
com.impossibl.pgjdbc-ng:pgjdbc-ng 0.4
com.squareup:protoparser 4.0.3
com.zaxxer:HikariCP 3.2.0
commons-io:commons-io 2.4
commons-net:commons-net 3.3
de.charite.compbio:jannovar-core 0.28
de.charite.compbio:jannovar-hgvs 0.28
de.charite.compbio:jannovar-htsjdk 0.28
de.sonumina:javautil 0.0.1
htsjdk:htsjdk 2.18.2
io.micrometer:micrometer-core 1.1.3
io.netty:netty-all 4.1.33.Final
jama:jama 1.0.3
javax.annotation:javax.annotation-api 1.3.2
javax.validation:validation-api 2.0.1.Final
jrt-fs:jrt-fs 12.0.1
jsr305:jsr305 1.3.9
ngs-java:ngs-java 2.9.0
ognl:ognl 3.1.12
ontologizer:ontologizer 0.0.1-SNAPSHOT
org.antlr:antlr4-runtime 4.7
org.apache.commons:commons-compress 1.4.1
org.apache.commons:commons-csv 1.1
org.apache.commons:commons-jexl 2.1.1
org.apache.logging.log4j:log4j-api 2.11.2
org.apache.logging.log4j:log4j-to-slf4j 2.11.2
org.apache.tomcat.embed:tomcat-embed-core 9.0.16
org.apache.tomcat.embed:tomcat-embed-el 9.0.16
org.apache.tomcat.embed:tomcat-embed-websocket 9.0.16
org.attoparser:attoparser 2.0.5.RELEASE
org.codehaus.mojo:animal-sniffer-annotations 1.14
org.h2:h2 1.4.197
org.hdrhistogram:HdrHistogram 2.1.9
org.hibernate.validator:hibernate-validator 6.0.14.Final
org.ini4j:ini4j 0.5.1
org.javassist:javassist 3.20.0-GA
org.jblas:jblas 1.2.3
org.jboss.logging:jboss-logging 3.3.2.Final
org.latencyutils:LatencyUtils 2.0.3
org.monarchinitiative.exomiser:exomiser-core 12.1.0
org.monarchinitiative.exomiser:exomiser-rest-prioritiser 12.1.0
org.monarchinitiative.exomiser:exomiser-spring-boot-autoconfigure 12.1.0
org.monarchinitiative.exomiser:exomiser-spring-boot-starter 12.1.0
org.pcollections:pcollections 3.0.3
org.prefuse:prefuse beta-20071021
org.slf4j:slf4j-api 1.7.25
org.springframework.boot:spring-boot-actuator-autoconfigure 2.1.3.RELEASE
org.springframework.boot:spring-boot-actuator 2.1.3.RELEASE
org.springframework.boot:spring-boot-autoconfigure 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter-actuator 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter-cache 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter-json 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter-logging 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter-tomcat 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter-web 2.1.3.RELEASE
org.springframework.boot:spring-boot-starter 2.1.3.RELEASE
org.springframework.boot:spring-boot 2.1.3.RELEASE
org.springframework:spring-aop 5.1.5.RELEASE
org.springframework:spring-beans 5.1.5.RELEASE
org.springframework:spring-context-support 5.1.5.RELEASE
org.springframework:spring-context 5.1.5.RELEASE
org.springframework:spring-core 5.1.5.RELEASE
org.springframework:spring-expression 5.1.5.RELEASE
org.springframework:spring-jcl 5.1.5.RELEASE
org.springframework:spring-jdbc 5.1.5.RELEASE
org.springframework:spring-tx 5.1.5.RELEASE
org.springframework:spring-web 5.1.5.RELEASE
org.springframework:spring-webmvc 5.1.5.RELEASE
org.thymeleaf:thymeleaf-spring5 3.0.11.RELEASE
org.thymeleaf:thymeleaf 3.0.11.RELEASE
org.tukaani.xz:xz 1.5
org.unbescape:unbescape 1.1.6.RELEASE
org.xerial.snappy.SnappyBundleActivator:snappy-java 1.1.4
org.yaml:snakeyaml 1.23
prefuse-beta:prefuse-beta 20071021