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gailr/bamsurgeon-42123 : latest
Latest release: over 1 year ago - 9 downloads - 432 dependencies
JSONDependencies
- ubuntu/adduser 3.118ubuntu2
- ubuntu/alsa-topology-conf 1.2.2-1
- ubuntu/alsa-ucm-conf 1.2.2-1ubuntu0.13
- ubuntu/apt 2.0.9
- ubuntu/at-spi2-core 2.36.0-2
- ubuntu/autoconf 2.69-11.1
- ubuntu/automake 1:1.16.1-4ubuntu6
- ubuntu/autotools-dev 20180224.1
- ubuntu/base-files 11ubuntu5.7
- ubuntu/base-passwd 3.5.47
- ubuntu/bash 5.0-6ubuntu1.2
- ubuntu/binutils-common 2.34-6ubuntu1.4
- ubuntu/binutils-x86-64-linux-gnu 2.34-6ubuntu1.4
- ubuntu/binutils 2.34-6ubuntu1.4
- ubuntu/bsdutils 1:2.34-0.1ubuntu9.3
- ubuntu/build-essential 12.8ubuntu1.1
- ubuntu/bwa 0.7.17-4
- ubuntu/bzip2-doc 1.0.8-2
- ubuntu/bzip2 1.0.8-2
- ubuntu/ca-certificates-java 20190405ubuntu1
- ubuntu/ca-certificates 20211016ubuntu0.20.04.1
- ubuntu/coreutils 8.30-3ubuntu2
- ubuntu/cpp-9 9.4.0-1ubuntu1~20.04.1
- ubuntu/cpp 4:9.3.0-1ubuntu2
- ubuntu/cwltool 2.0.20200224214940 dfsg-1
- ubuntu/dash 0.5.10.2-6
- ubuntu/dbus 1.12.16-2ubuntu2.3
- ubuntu/debconf 1.5.73
- ubuntu/debianutils 4.9.1
- ubuntu/default-jre-headless 2:1.11-72
- ubuntu/default-jre 2:1.11-72
- ubuntu/diffutils 1:3.7-3
- ubuntu/dirmngr 2.2.19-3ubuntu2.2
- ubuntu/dpkg-dev 1.19.7ubuntu3.2
- ubuntu/dpkg 1.19.7ubuntu3.2
- ubuntu/e2fsprogs 1.45.5-2ubuntu1.1
- ubuntu/fakeroot 1.24-1
- ubuntu/fdisk 2.34-0.1ubuntu9.3
- ubuntu/file 1:5.38-4
- ubuntu/findutils 4.7.0-1ubuntu1
- ubuntu/fontconfig-config 2.13.1-2ubuntu3
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/fonts-dejavu-extra 2.37-1
- ubuntu/fonts-glyphicons-halflings 1.009~3.4.1 dfsg-1
- ubuntu/g -9 9.4.0-1ubuntu1~20.04.1
- ubuntu/g 4:9.3.0-1ubuntu2
- ubuntu/gcc-10-base 10.3.0-1ubuntu1~20.04
- ubuntu/gcc-9-base 9.4.0-1ubuntu1~20.04.1
- ubuntu/gcc-9 9.4.0-1ubuntu1~20.04.1
- ubuntu/gcc 4:9.3.0-1ubuntu2
- ubuntu/git-man 1:2.25.1-1ubuntu3.10
- ubuntu/git 1:2.25.1-1ubuntu3.10
- ubuntu/gnupg-l10n 2.2.19-3ubuntu2.2
- ubuntu/gnupg-utils 2.2.19-3ubuntu2.2
- ubuntu/gnupg 2.2.19-3ubuntu2.2
- ubuntu/gpg-agent 2.2.19-3ubuntu2.2
- ubuntu/gpg-wks-client 2.2.19-3ubuntu2.2
- ubuntu/gpg-wks-server 2.2.19-3ubuntu2.2
- ubuntu/gpg 2.2.19-3ubuntu2.2
- ubuntu/gpgconf 2.2.19-3ubuntu2.2
- ubuntu/gpgsm 2.2.19-3ubuntu2.2
- ubuntu/gpgv 2.2.19-3ubuntu2.2
- ubuntu/grep 3.4-1
- ubuntu/gzip 1.10-0ubuntu4.1
- ubuntu/hostname 3.23
- ubuntu/init-system-helpers 1.57
- ubuntu/java-common 0.72
- ubuntu/krb5-locales 1.17-6ubuntu4.3
- ubuntu/less 551-1ubuntu0.1
- ubuntu/libacl1 2.2.53-6
- ubuntu/libalgorithm-diff-perl 1.19.03-2
- ubuntu/libalgorithm-diff-xs-perl 0.04-6
- ubuntu/libalgorithm-merge-perl 0.08-3
- ubuntu/libapparmor1 2.13.3-7ubuntu5.2
- ubuntu/libapt-pkg6.0 2.0.9
- ubuntu/libasan5 9.4.0-1ubuntu1~20.04.1
- ubuntu/libasn1-8-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libasound2-data 1.2.2-2.1ubuntu2.5
- ubuntu/libasound2 1.2.2-2.1ubuntu2.5
- ubuntu/libassuan0 2.5.3-7ubuntu2
- ubuntu/libatk-bridge2.0-0 2.34.2-0ubuntu2~20.04.1
- ubuntu/libatk-wrapper-java-jni 0.37.1-1
- ubuntu/libatk-wrapper-java 0.37.1-1
- ubuntu/libatk1.0-0 2.35.1-1ubuntu2
- ubuntu/libatk1.0-data 2.35.1-1ubuntu2
- ubuntu/libatomic1 10.3.0-1ubuntu1~20.04
- ubuntu/libatspi2.0-0 2.36.0-2
- ubuntu/libattr1 1:2.4.48-5
- ubuntu/libaudit-common 1:2.8.5-2ubuntu6
- ubuntu/libaudit1 1:2.8.5-2ubuntu6
- ubuntu/libavahi-client3 0.7-4ubuntu7.1
- ubuntu/libavahi-common-data 0.7-4ubuntu7.1
- ubuntu/libavahi-common3 0.7-4ubuntu7.1
- ubuntu/libbinutils 2.34-6ubuntu1.4
- ubuntu/libblas3 3.9.0-1build1
- ubuntu/libblkid-dev 2.34-0.1ubuntu9.3
- ubuntu/libblkid1 2.34-0.1ubuntu9.3
- ubuntu/libbrotli1 1.0.7-6ubuntu0.1
- ubuntu/libbsd0 0.10.0-1
- ubuntu/libbz2-1.0 1.0.8-2
- ubuntu/libbz2-dev 1.0.8-2
- ubuntu/libc-ares2 1.15.0-1ubuntu0.2
- ubuntu/libc-bin 2.31-0ubuntu9.9
- ubuntu/libc-dev-bin 2.31-0ubuntu9.9
- ubuntu/libc6-dev 2.31-0ubuntu9.9
- ubuntu/libc6 2.31-0ubuntu9.9
- ubuntu/libcap-ng0 0.7.9-2.1build1
- ubuntu/libcbor0.6 0.6.0-0ubuntu1
- ubuntu/libcc1-0 10.3.0-1ubuntu1~20.04
- ubuntu/libcom-err2 1.45.5-2ubuntu1.1
- ubuntu/libcrypt-dev 1:4.4.10-10ubuntu4
- ubuntu/libcrypt1 1:4.4.10-10ubuntu4
- ubuntu/libctf-nobfd0 2.34-6ubuntu1.4
- ubuntu/libctf0 2.34-6ubuntu1.4
- ubuntu/libcups2 2.3.1-9ubuntu1.2
- ubuntu/libcurl3-gnutls 7.68.0-1ubuntu2.18
- ubuntu/libdb5.3 5.3.28 dfsg1-0.6ubuntu2
- ubuntu/libdbus-1-3 1.12.16-2ubuntu2.3
- ubuntu/libdebconfclient0 0.251ubuntu1
- ubuntu/libdeflate0 1.5-3
- ubuntu/libdpkg-perl 1.19.7ubuntu3.2
- ubuntu/libdrm-amdgpu1 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-common 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-intel1 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-nouveau2 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm-radeon1 2.4.107-8ubuntu1~20.04.2
- ubuntu/libdrm2 2.4.107-8ubuntu1~20.04.2
- ubuntu/libedit2 3.1-20191231-1
- ubuntu/libelf1 0.176-1.1build1
- ubuntu/liberror-perl 0.17029-1
- ubuntu/libexpat1-dev 2.2.9-1ubuntu0.6
- ubuntu/libexpat1 2.2.9-1ubuntu0.6
- ubuntu/libext2fs2 1.45.5-2ubuntu1.1
- ubuntu/libfakeroot 1.24-1
- ubuntu/libfdisk1 2.34-0.1ubuntu9.3
- ubuntu/libffi-dev 3.3-4
- ubuntu/libffi7 3.3-4
- ubuntu/libfido2-1 1.3.1-1ubuntu2
- ubuntu/libfile-fcntllock-perl 0.22-3build4
- ubuntu/libfontconfig1 2.13.1-2ubuntu3
- ubuntu/libfontenc1 1:1.1.4-0ubuntu1
- ubuntu/libfreetype6 2.10.1-2ubuntu0.2
- ubuntu/libgcc-9-dev 9.4.0-1ubuntu1~20.04.1
- ubuntu/libgcc-s1 10.3.0-1ubuntu1~20.04
- ubuntu/libgcrypt20 1.8.5-5ubuntu1.1
- ubuntu/libgdbm-compat4 1.18.1-5
- ubuntu/libgdbm6 1.18.1-5
- ubuntu/libgfortran5 10.3.0-1ubuntu1~20.04
- ubuntu/libgif7 5.1.9-1
- ubuntu/libgl1-mesa-dri 21.2.6-0ubuntu0.1~20.04.2
- ubuntu/libgl1 1.3.2-1~ubuntu0.20.04.2
- ubuntu/libglapi-mesa 21.2.6-0ubuntu0.1~20.04.2
- ubuntu/libglib2.0-0 2.64.6-1~ubuntu20.04.4
- ubuntu/libglib2.0-bin 2.64.6-1~ubuntu20.04.4
- ubuntu/libglib2.0-data 2.64.6-1~ubuntu20.04.4
- ubuntu/libglib2.0-dev-bin 2.64.6-1~ubuntu20.04.4
- ubuntu/libglib2.0-dev 2.64.6-1~ubuntu20.04.4
- ubuntu/libglvnd0 1.3.2-1~ubuntu0.20.04.2
- ubuntu/libglx-mesa0 21.2.6-0ubuntu0.1~20.04.2
- ubuntu/libglx0 1.3.2-1~ubuntu0.20.04.2
- ubuntu/libgmp10 2:6.2.0 dfsg-4ubuntu0.1
- ubuntu/libgnutls30 3.6.13-2ubuntu1.8
- ubuntu/libgomp1 10.3.0-1ubuntu1~20.04
- ubuntu/libgpg-error0 1.37-1
- ubuntu/libgraphite2-3 1.3.13-11build1
- ubuntu/libgssapi-krb5-2 1.17-6ubuntu4.3
- ubuntu/libgssapi3-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libharfbuzz0b 2.6.4-1ubuntu4.2
- ubuntu/libhcrypto4-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libheimbase1-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libheimntlm0-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libhogweed5 3.5.1 really3.5.1-2ubuntu0.2
- ubuntu/libhts3 1.10.2-3ubuntu0.1
- ubuntu/libhx509-5-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libice6 2:1.0.10-0ubuntu1
- ubuntu/libicu66 66.1-2ubuntu2.1
- ubuntu/libidn2-0 2.2.0-2
- ubuntu/libisl22 0.22.1-1
- ubuntu/libitm1 10.3.0-1ubuntu1~20.04
- ubuntu/libjpeg-turbo8 2.0.3-0ubuntu1.20.04.3
- ubuntu/libjpeg8 8c-2ubuntu8
- ubuntu/libjs-bootstrap 3.4.1 dfsg-1
- ubuntu/libk5crypto3 1.17-6ubuntu4.3
- ubuntu/libkeyutils1 1.6-6ubuntu1.1
- ubuntu/libkrb5-26-heimdal 7.7.0 dfsg-1ubuntu1.4
- ubuntu/libkrb5-3 1.17-6ubuntu4.3
- ubuntu/libkrb5support0 1.17-6ubuntu4.3
- ubuntu/libksba8 1.3.5-2ubuntu0.20.04.2
- ubuntu/liblapack3 3.9.0-1build1
- ubuntu/liblcms2-2 2.9-4
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- ubuntu/libllvm12 1:12.0.0-3ubuntu1~20.04.5
- ubuntu/liblocale-gettext-perl 1.07-4
- ubuntu/liblsan0 10.3.0-1ubuntu1~20.04
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- ubuntu/liblzma-dev 5.2.4-1ubuntu1.1
- ubuntu/liblzma5 5.2.4-1ubuntu1.1
- ubuntu/libmagic-mgc 1:5.38-4
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- ubuntu/libmount-dev 2.34-0.1ubuntu9.3
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- ubuntu/libmpc3 1.1.0-1
- ubuntu/libmpdec2 2.4.2-3
- ubuntu/libmpfr6 4.0.2-1
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- ubuntu/libnettle7 3.5.1 really3.5.1-2ubuntu0.2
- ubuntu/libnghttp2-14 1.40.0-1build1
- ubuntu/libnode64 10.19.0~dfsg-3ubuntu1
- ubuntu/libnpth0 1.6-1
- ubuntu/libnspr4 2:4.25-1
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- ubuntu/libp11-kit0 0.23.20-1ubuntu0.1
- ubuntu/libpam-modules-bin 1.3.1-5ubuntu4.6
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- ubuntu/libpam-runtime 1.3.1-5ubuntu4.6
- ubuntu/libpam0g 1.3.1-5ubuntu4.6
- ubuntu/libpciaccess0 0.16-0ubuntu1
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- ubuntu/tar 1.30 dfsg-7ubuntu0.20.04.3
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- ubuntu/ubuntu-keyring 2020.02.11.4
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- ubuntu/xz-utils 5.2.4-1ubuntu1.1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-2ubuntu1.5
- ubuntu/zlib1g 1:1.2.11.dfsg-2ubuntu1.5
- bash 5.0.17
- com.google.guava:guava 15.0
- commons-io:commons-io 2.4
- commons-lang:commons-lang 2.6
- commons-logging:commons-logging 1.1.1
- jrt-fs:jrt-fs 11.0.18
- junit:junit 4.12
- net.sf.jopt-simple:jopt-simple 5.0.3
- org.GNOME.Accessibility.AtkWrapper:java-atk-wrapper *
- org.apache.commons:commons-collections4 4.3
- org.apache.commons:commons-compress 1.19
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.4
- org.apache.commons:commons-math3 3.5
- org.apache.logging.log4j:log4j-api 2.17.1
- org.apache.logging.log4j:log4j-core 2.17.1
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.sharegov:mjson 1.4.1
- org.yaml:snakeyaml 1.24
- picard:picard 2.27.3