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nfcore/universc : 1.2.5.1

Mirror of container for UniverSC: a flexible cross-platform SC data processing pipeline

Ubuntu 18.04.6 LTS

Latest release: almost 2 years ago - 646 downloads - 2,033 dependencies

JSON

Dependencies

arrayvec 0.5.1
atty 0.2.11
atty 0.2.13
atty 0.2.14
atty 0.2.8
autocfg 0.1.6
autocfg 0.1.7
autocfg 1.0.0
either 1.5.0
either 1.5.3
env_logger 0.6.0
env_logger 0.6.2
env_logger 0.7.1
error-chain 0.11.0
error-chain 0.12.1
extprim 1.4.0
failure 0.1.6
rand 0.4.6
rand 0.5.6
rand 0.6.5
rand 0.7.2
rand 0.7.3
rand_chacha 0.1.1
rand_chacha 0.2.1
rand_core 0.2.2
rand_core 0.3.1
rand_core 0.4.2
rand_core 0.5.1
rand_hc 0.1.0
rand_hc 0.2.0
rand_isaac 0.1.1
rand_jitter 0.1.4
rand_os 0.1.3
rand_pcg 0.1.2
rand_xorshift 0.1.1
rawpointer 0.1.0
rawpointer 0.2.0
rawpointer 0.2.1
tenkit 0.1.0
termcolor 1.0.4
termcolor 1.1.0
termion 1.5.1
textwrap 0.10.0
textwrap 0.11.0
thread_local 0.3.4
thread_local 0.3.6
thread_local 1.0.1
rayon-core 1.6.0
rayon-core 1.7.0
rayon 1.2.0
rayon 1.3.0
rdrand 0.4.0
syslog 3.3.0
syslog 4.0.1
tempdir 0.3.5
tempdir 0.3.7
tempfile 3.1.0
addr2line 0.11.0
adler32 1.0.4
aho-corasick 0.6.10
aho-corasick 0.6.3
aho-corasick 0.6.8
aho-corasick 0.6.9
aho-corasick 0.7.7
aho-corasick 0.7.8
annotate_reads 0.1.0
ansi_term 0.11.0
approx 0.1.1
approx 0.3.2
arc-swap 0.4.3
arrayvec 0.4.11
backtrace-sys 0.1.31
backtrace-sys 0.1.32
backtrace 0.3.38
backtrace 0.3.40
backtrace 0.3.44
bencher 0.1.5
bincode 1.2.1
bindgen 0.51.1
bio-types 0.5.1
bio 0.14.3-pre
bio 0.30.0
bit-set 0.4.0
bit-set 0.5.1
bit-vec 0.4.4
bit-vec 0.5.1
bitflags 0.5.0
bitflags 0.7.0
bitflags 0.9.1
bitflags 1.0.4
bitflags 1.1.0
bitflags 1.2.0
bitflags 1.2.1
blas-src 0.2.1
boomphf 0.5.2
bstr 0.2.1
bstr 0.2.11
bv 0.11.0
bytecount 0.1.7
bytecount 0.4.0
bytecount 0.6.0
byteorder 1.1.0
byteorder 1.2.7
byteorder 1.3.1
byteorder 1.3.2
byteorder 1.3.4
bytes 0.4.12
bzip2-sys 0.1.7
c2-chacha 0.2.3
cargo_metadata 0.6.4
cblas-sys 0.1.4
cc 1.0.25
cc 1.0.45
cc 1.0.46
cc 1.0.47
cc 1.0.50
cexpr 0.3.3
cexpr 0.3.6
cfg-if 0.1.10
cfg-if 0.1.5
cfg-if 0.1.6
cfg-if 0.1.9
cgmath 0.16.1
chrono 0.4.10
chrono 0.4.9
chunk_reads 0.1.0
clang-sys 0.28.0
clang-sys 0.28.1
clap 2.32.0
clap 2.33.0
cloudabi 0.0.3
colored 1.8.0
compiler_builtins 0.1.24
conv 0.3.3
cpp_demangle 0.2.14
cr_stage 0.1.0
crc32fast 1.2.0
crossbeam-deque 0.7.1
crossbeam-deque 0.7.2
crossbeam-epoch 0.7.2
crossbeam-epoch 0.8.0
crossbeam-queue 0.1.2
crossbeam-queue 0.2.1
crossbeam-utils 0.6.6
crossbeam-utils 0.7.0
csv-core 0.1.10
csv-core 0.1.6
csv 0.15.0
csv 1.1.3
custom_derive 0.1.7
debruijn 0.1.0
debruijn 0.3.0
defmac 0.2.1
derive 1.0.0
detect_chemistry 0.1.0
diff 0.1.11
doc-comment 0.3.1
docopt 0.8.1
dtoa 0.4.1
either 1.1.0
docopt 1.1.0
failure_derive 0.1.6
fallible-iterator 0.2.0
fastq 0.4.1
feature-probe 0.1.1
fern 0.5.9
findshlibs 0.5.0
fixedbitset 0.1.9
flate2 0.2.19
flate2 0.2.20
flate2 1.0.13
fnv 1.0.6
fs-utils 1.0.0
fs-utils 1.1.4
fuchsia-cprng 0.1.1
fuchsia-zircon-sys 0.3.3
fuchsia-zircon 0.3.3
futures 0.1.29
fxhash 0.1.2
fxhash 0.2.1
gcc 0.3.51
getopts 0.2.15
getrandom 0.1.13
getrandom 0.1.14
getset 0.0.9
gimli 0.20.0
glob 0.2.11
glob 0.3.0
goblin 0.1.3
heck 0.3.1
hermit-abi 0.1.3
hermit-abi 0.1.6
hermit-abi 0.1.7
histogram 0.6.9
humantime 1.1.1
humantime 1.2.0
humantime 1.3.0
idna 0.1.4
idna 0.1.5
ieee754 0.2.2
ieee754 0.2.6
iovec 0.1.4
itertools-num 0.1.1
itertools-num 0.1.3
itertools 0.4.19
itertools 0.6.1
itertools 0.7.11
itertools 0.8.0
itertools 0.8.2
itoa 0.3.1
itoa 0.4.4
itoa 0.4.5
jobserver 0.1.18
kernel32-sys 0.2.2
lazy_static 0.2.11
lazy_static 0.2.8
lazy_static 1.0.0
lazy_static 1.1.0
lazy_static 1.3.0
lazy_static 1.4.0
lazycell 1.2.1
libc 0.2.29
libc 0.2.40
libc 0.2.43
libc 0.2.58
libc 0.2.62
libc 0.2.65
libc 0.2.66
libloading 0.5.0
libloading 0.5.2
libz-sys 1.0.25
linear-map 1.2.0
linked-hash-map 0.5.0
lock_api 0.3.1
log 0.3.9
log 0.4.5
log 0.4.6
log 0.4.8
lz4-sys 1.7.5
lz4-sys 1.8.3
lz4 1.21.1
lz4 1.23.1
lzma-sys 0.1.15
magenta-sys 0.1.1
magenta 0.1.1
mark_duplicates 0.1.0
martian 0.1.0
matches 0.1.6
matches 0.1.8
synstructure 0.12.1
matrixmultiply 0.1.13
matrixmultiply 0.2.3
maybe-uninit 2.0.0
memchr 1.0.1
memchr 2.1.0
memchr 2.1.1
memchr 2.2.0
memchr 2.3.0
memchr 2.3.2
memmap 0.7.0
memoffset 0.5.1
memoffset 0.5.2
memoffset 0.5.3
miniz-sys 0.1.12
miniz-sys 0.1.9
miniz_oxide 0.3.5
miniz_oxide 0.3.6
mio 0.6.19
miow 0.2.1
multimap 0.4.0
multimap 0.6.0
ndarray 0.13.0
ndarray 0.9.1
net2 0.2.33
newtype_derive 0.1.6
no-panic 0.1.11
nodrop 0.1.13
nom 4.0.0
nom 4.2.3
num-bigint 0.1.40
num-bigint 0.2.6
num-complex 0.1.40
num-complex 0.2.3
num-complex 0.2.4
num-integer 0.1.35
num-integer 0.1.41
num-integer 0.1.42
num-iter 0.1.34
num-iter 0.1.40
num-rational 0.1.39
num-rational 0.2.3
num-traits 0.1.40
num-traits 0.1.43
num-traits 0.2.11
num-traits 0.2.8
num 0.1.40
num 0.2.1
num_cpus 1.10.1
num_cpus 1.11.0
num_cpus 1.12.0
ordered-float 0.5.0
ordered-float 1.0.2
ordermap 0.3.5
parking_lot 0.9.0
parking_lot_core 0.6.2
pdqsort 1.0.3
peeking_take_while 0.1.2
percent-encoding 1.0.0
percent-encoding 1.0.1
permutohedron 0.2.4
petgraph 0.4.13
pkg-config 0.3.17
plain 0.2.3
ppv-lite86 0.2.6
proc-macro-hack 0.5.11
proc-macro2 0.4.29
proc-macro2 0.4.30
proc-macro2 1.0.0
proc-macro2 1.0.5
proc-macro2 1.0.7
proc-macro2 1.0.8
pulldown-cmark 0.0.8
pulldown-cmark 0.2.0
quick-error 1.2.0
quick-error 1.2.2
quick-error 1.2.3
quickcheck 0.7.2
quickcheck 0.8.5
quickcheck 0.9.0
quote 0.3.15
quote 0.6.12
quote 0.6.13
quote 1.0.0
quote 1.0.2
rand 0.3.16
synstructure 0.12.3
redox_syscall 0.1.29
redox_syscall 0.1.37
redox_syscall 0.1.40
redox_syscall 0.1.56
redox_termios 0.1.1
regex-automata 0.1.7
regex-automata 0.1.8
regex-syntax 0.4.1
regex-syntax 0.5.6
regex-syntax 0.6.14
regex-syntax 0.6.2
regex-syntax 0.6.5
regex 0.2.11
regex 0.2.2
regex 1.0.5
regex 1.1.0
regex 1.3.4
remove_dir_all 0.5.2
reopen 0.3.0
rgb 0.8.14
rust-htslib 0.13.0
rust-htslib 0.24.0
rustc-demangle 0.1.16
rustc-hash 1.0.1
rustc-hash 1.1.0
rustc-serialize 0.3.24
rustc-std-workspace-core 1.0.0
rustc_version 0.1.7
rustc_version 0.2.1
rustc_version 0.2.3
rustversion 1.0.2
ryu 1.0.0
ryu 1.0.2
same-file 1.0.6
scopeguard 1.0.0
scopeguard 1.1.0
scroll 0.10.1
scroll_derive 0.10.1
semver-parser 0.7.0
semver 0.1.20
semver 0.6.0
semver 0.9.0
serde 0.8.23
serde 1.0.101
serde 1.0.104
serde 1.0.11
serde 1.0.90
serde 1.0.93
serde_bytes 0.11.1
serde_derive 1.0.104
serde_derive 1.0.11
serde_derive 1.0.90
serde_derive 1.0.93
serde_derive_internals 0.15.1
serde_json 1.0.2
serde_json 1.0.48
shlex 0.1.1
signal-hook-registry 1.1.1
signal-hook 0.1.10
skeptic 0.13.4
skeptic 0.9.0
slab 0.4.2
smallvec 0.4.1
smallvec 0.6.13
smallvec 1.1.0
smallvec 1.2.0
snafu-derive 0.5.0
snafu 0.5.0
stable_deref_trait 1.1.1
statrs 0.11.0
strsim 0.6.0
strsim 0.7.0
strsim 0.8.0
strsim 0.9.3
strum 0.16.0
strum_macros 0.16.0
syn 0.11.11
syn 0.15.33
syn 0.15.38
syn 0.15.44
syn 1.0.13
syn 1.0.14
syn 1.0.5
synom 0.11.3
time-macros-impl 0.1.0
time-macros 0.1.0
time 0.1.38
time 0.1.42
time 0.2.6
tokio-executor 0.1.8
tokio-io 0.1.12
tokio-reactor 0.1.10
tokio-sync 0.1.7
tokio-tcp 0.1.3
tokio-threadpool 0.1.16
ucd-parse 0.1.6
ucd-util 0.1.1
ucd-util 0.1.7
unicode-bidi 0.3.4
unicode-normalization 0.1.12
unicode-normalization 0.1.5
unicode-segmentation 1.6.0
unicode-width 0.1.5
unicode-width 0.1.6
unicode-width 0.1.7
unicode-xid 0.0.4
unicode-xid 0.1.0
unicode-xid 0.2.0
unix_socket 0.5.0
unreachable 0.1.1
unreachable 1.0.0
url 1.5.1
url 1.7.2
utf8-ranges 1.0.0
utf8-ranges 1.0.1
utf8-ranges 1.0.2
utf8-ranges 1.0.4
vcpkg 0.2.7
vcpkg 0.2.8
vdj_asm 0.1.0
vec_map 0.8.0
vec_map 0.8.1
version_check 0.1.4
version_check 0.1.5
void 1.0.2
walkdir 2.3.1
wasi 0.7.0
wasi 0.9.0 wasi-snapshot-preview1
which 3.0.0
which 3.1.0
winapi-build 0.1.1
winapi-i686-pc-windows-gnu 0.3.2
winapi-i686-pc-windows-gnu 0.4.0
winapi-util 0.1.1
winapi-util 0.1.2
winapi-util 0.1.3
winapi-x86_64-pc-windows-gnu 0.3.2
winapi-x86_64-pc-windows-gnu 0.4.0
winapi 0.2.8
winapi 0.3.2
winapi 0.3.4
winapi 0.3.5
winapi 0.3.8
wincolor 1.0.1
winconsole 0.10.0
ws2_32-sys 0.2.1
wyhash 0.3.0

ansistyles 0.1.3
any-promise 1.3.0
anymatch 2.0.0
append-buffer 1.0.2
aproba 1.2.0
aproba 2.0.0
archy 1.0.0
detect-indent 5.0.0
detect-newline 2.1.0
dezalgo 1.0.3
diff 3.5.0
doctypes 1.1.0
dot-prop 4.2.0
dotenv 5.0.1
duplexer2 0.0.2
duplexer3 0.1.4
duplexer 0.1.1
duplexify 3.6.0
duplexify 3.6.1
each-props 1.3.2
ecc-jsbn 0.1.2
editor 1.0.0
encoding 0.1.12
end-of-stream 1.4.1
env-paths 2.2.0
err-code 1.1.2
errno 0.1.7
error-ex 1.3.2
es-abstract 1.12.0
es-to-primitive 1.2.0
es5-ext 0.10.46
es6-iterator 2.0.3
es6-promise 4.2.8
es6-promisify 5.0.0
es6-symbol 3.1.1
es6-weak-map 2.0.2
has-flag 3.0.0
has-gulplog 0.1.0
has-symbols 1.0.0
has-unicode 2.0.1
has-value 1.0.0
has-values 1.0.0
has 1.0.3
he 1.1.1
just-debounce 1.0.0
kind-of 1.1.0
kind-of 6.0.2
last-run 1.1.1
latest-version 3.1.0
lazy-cache 1.0.4
lazy-property 1.0.0
lazystream 1.0.0
lcid 1.0.0
lcid 2.0.0
lead 1.0.0
libcipm 4.0.7
libnpm 3.0.1
libnpmaccess 3.0.2
libnpmconfig 1.2.1
libnpmhook 5.0.3
libnpmorg 1.0.1
libnpmpublish 1.1.2
libnpmsearch 2.0.2
libnpmteam 1.0.2
libnpx 10.2.2
liftoff 2.5.0
load-json-file 1.1.0
locate-path 2.0.0
locate-path 3.0.0
lock-verify 2.1.0
lockfile 1.0.4
pseudomap 1.0.2
psl 1.1.29
pug-attrs 2.0.3
pug-cli 1.0.0-alpha6
pug-code-gen 2.0.1
pug-error 1.3.2
pug-filters 3.1.0
pug-lexer 4.0.0
pug-linker 3.0.5
pug-load 2.0.11
pug-parser 5.0.0
pug-runtime 2.0.4
sparkles 1.0.1
spdx-correct 3.0.0
spdx-correct 3.0.2
spdx-exceptions 2.1.0
spdx-exceptions 2.2.0
util-extend 1.0.3
util-promisify 2.1.0
uuid 3.3.2
uuid 3.3.3
v8flags 3.1.1
@gfx/zopfli 1.0.9
@types/babel-types 7.0.4
@types/babylon 6.16.3
@types/mocha 5.2.5
@types/node 8.10.39
@types/pug 2.0.4
JSONStream 1.3.5
abbrev 1.1.1
acorn-globals 3.1.0
acorn 3.3.0
agent-base 4.2.1
agent-base 4.3.0
agentkeepalive 3.5.2
ajv 5.5.2
ajv 6.6.1
align-text 0.1.4
angular 1.7.5
ansi-align 2.0.0
ansi-colors 1.1.0
ansi-cyan 0.1.1
ansi-gray 0.1.1
ansi-red 0.1.1
ansi-regex 2.1.1
ansi-regex 3.0.0
ansi-styles 2.2.1
ansi-styles 3.2.1
ansi-wrap 0.1.0
ansicolors 0.3.2
are-we-there-yet 1.1.4
argparse 1.0.10
arr-diff 1.1.0
arr-diff 4.0.0
arr-filter 1.1.2
arr-flatten 1.1.0
arr-map 2.0.2
arr-union 2.1.0
arr-union 3.1.0
array-differ 1.0.0
array-each 1.0.1
array-initial 1.1.0
array-last 1.3.0
array-slice 0.2.3
array-slice 1.1.0
array-sort 1.0.0
array-union 1.0.2
array-uniq 1.0.3
array-unique 0.3.2
arrify 1.0.1
asap 2.0.6
asn1 0.2.4
assert-plus 1.0.0
assign-symbols 1.0.0
async-done 1.3.1
async-each 1.0.1
async-settle 1.0.0
asynckit 0.4.0
atob 2.1.2
aws-sign2 0.7.0
aws4 1.8.0
babel-code-frame 6.26.0
babel-runtime 6.26.0
babel-types 6.26.0
babylon 6.18.0
bach 1.2.0
balanced-match 1.0.0
base64-js 1.3.0
base 0.11.2
bcrypt-pbkdf 1.0.2
beeper 1.1.1
bin-links 1.1.7
binary-extensions 1.12.0
block-stream 0.0.9
bluebird 3.5.5
boxen 1.3.0
brace-expansion 1.1.11
braces 2.3.2
browser-stdout 1.3.0
buffer-crc32 0.2.13
buffer-equal 1.0.0
buffer-from 1.0.0
buffer-from 1.1.1
builtin-modules 1.1.1
builtins 1.0.3
byline 5.0.0
byte-size 5.0.1
bytes 3.0.0
cacache 12.0.3
cache-base 1.0.1
call-limit 1.1.1
camelcase 3.0.0
camelcase 4.1.0
capture-stack-trace 1.0.0
caseless 0.12.0
center-align 0.1.3
chalk 1.1.3
chalk 2.4.1
character-parser 2.2.0
chokidar 2.0.4
chownr 1.1.4
ci-info 1.6.0
ci-info 2.0.0
cidr-regex 2.0.10
class-utils 0.3.6
clean-css-cli 4.2.1
clean-css 4.2.1
cli-boxes 1.0.0
cli-columns 3.1.2
cli-table3 0.5.1
cliui 3.2.0
cliui 4.1.0
clone-buffer 1.0.0
clone-stats 0.0.1
clone-stats 1.0.0
clone 0.2.0
clone 1.0.4
clone 2.1.2
cloneable-readable 1.1.2
cmd-shim 3.0.3
co 4.6.0
code-point-at 1.1.0
coffeescript 1.12.7
collection-map 1.0.0
collection-visit 1.0.0
color-convert 1.9.1
color-convert 1.9.3
color-name 1.1.3
color-support 1.1.3
colors 1.3.3
columnify 1.5.4
combined-stream 1.0.6
combined-stream 1.0.7
commander 2.19.0
component-emitter 1.2.1
concat-map 0.0.1
concat-stream 1.6.2
concat-with-sourcemaps 1.1.0
config-chain 1.1.12
configstore 3.1.2
console-control-strings 1.1.0
constantinople 3.1.2
convert-source-map 1.6.0
copy-concurrently 1.0.5
copy-descriptor 0.1.1
copy-props 2.0.4
core-js 2.5.7
core-util-is 1.0.2
create-error-class 3.0.2
cross-spawn 5.1.0
cross-spawn 6.0.5
crypto-random-string 1.0.0
cyclist 0.2.2
d3-array 1.2.1
d3-axis 1.0.8
d3-brush 1.0.4
d3-chord 1.0.4
d3-collection 1.0.4
d3-color 1.0.3
d3-dispatch 1.0.3
d3-drag 1.2.1
d3-dsv 1.0.8
d3-ease 1.0.3
d3-force 1.1.0
d3-format 1.2.2
d3-geo 1.9.1
d3-hierarchy 1.1.5
d3-interpolate 1.1.6
d3-path 1.0.5
d3-polygon 1.0.3
d3-quadtree 1.0.3
d3-queue 3.0.7
d3-random 1.1.0
d3-request 1.0.6
d3-scale 1.0.7
d3-selection 1.3.0
d3-shape 1.2.0
d3-time-format 2.1.1
d3-time 1.0.8
d3-timer 1.0.7
d3-transition 1.1.1
d3-voronoi 1.1.2
d3-zoom 1.7.1
d3 4.13.0
d 1.0.0
dagre-d3 0.6.3
dagre 0.8.4
dashdash 1.14.1
dateformat 2.2.0
debug 2.6.9
debug 3.1.0
debuglog 1.0.1
decamelize 1.2.0
decode-uri-component 0.2.0
deep-assign 1.0.0
deep-extend 0.6.0
default-compare 1.0.0
default-resolution 2.0.0
defaults 1.0.3
define-properties 1.1.3
define-property 2.0.2
delayed-stream 1.0.0
delegates 1.0.0
detect-file 1.0.0
escape-string-regexp 1.0.5
esprima 4.0.1
esutils 2.0.2
event-stream 3.3.4
execa 0.7.0
execa 1.0.0
expand-brackets 2.1.4
expand-tilde 2.0.2
extend-shallow 1.1.4
extend-shallow 3.0.2
extend 3.0.2
extglob 2.0.4
extsprintf 1.3.0
fancy-log 1.3.2
fast-deep-equal 1.1.0
fast-deep-equal 2.0.1
fast-json-stable-stringify 2.0.0
fd-slicer 1.1.0
figgy-pudding 3.5.1
fill-range 4.0.0
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lodash.debounce 4.0.8
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lodash.isarray 3.0.4
lodash.keys 3.1.2
lodash.restparam 3.6.1
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normalize-package-data 2.5.0
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spdx-license-ids 3.0.3
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split 0.3.3
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sshpk 1.15.2
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tar 4.4.13
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through2 2.0.3
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undertaker-registry 1.0.1
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unique-stream 2.2.1
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unset-value 1.0.0
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update-notifier 2.5.0
uri-js 4.2.2
urix 0.1.0
url-parse-lax 1.0.0
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util-deprecate 1.0.2
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validate-npm-package-name 3.0.0
value-or-function 3.0.0
verror 1.10.0
vinyl-fs 3.0.3
vinyl-source-stream 1.1.2
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vinyl 0.4.6
vinyl 2.2.0
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vscode-jsonrpc 4.0.0
vscode-languageclient 4.3.0
vscode-languageserver-protocol 3.13.0
vscode-languageserver-types 3.13.0
vscode 1.1.26
wcwidth 1.0.1
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widest-line 2.0.1
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with 5.1.1
wordwrap 0.0.2
worker-farm 1.7.0
wrap-ansi 2.1.0
wrappy 1.0.2
write-file-atomic 2.4.3
xdg-basedir 3.0.0
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y18n 3.2.1
y18n 4.0.0
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yallist 3.0.3
yargs-parser 5.0.0
yargs-parser 9.0.2
yargs 11.1.1
yargs 7.1.0
yauzl 2.10.0
yazl 2.5.1

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pathtools 0.1.2
patsy 0.3.0
pep8 1.6.2
pillow 2.7.0
pip 8.1.2
ply 3.4
psutil 2.2.1
ptyprocess 0.4
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pycosat 0.6.1
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pycrypto 2.6.1
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pyopenssl 0.14
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pysam 0.12.0.1
pytest 2.6.4
python-dateutil 2.3
openpyxl 1.8.5
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MarkupSafe 0.23
PyYAML 3.11
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abstract_rendering 0.5.1
argcomplete 0.8.4
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binstar 0.10.1
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clyent 0.3.4
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configobj 5.0.6
cytoolz 0.7.2
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docutils 0.12
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greenlet 0.4.5
grin 1.2.1
h5py 2.6.0
itsdangerous 0.24
jedi 0.8.1
jinja2 2.10.1
jsonschema 2.4.0
livereload 2.3.2
lz4 2.2.1
markupsafe 0.23
matplotlib 1.4.2
mistune 0.5.1
mock 1.0.1
multipledispatch 0.4.7
networkx 1.9.1
nose 1.3.4
numba 0.17.0
numexpr 2.6.2
numpy 1.13.3
numpy 1.9.1
numpydoc 0.5
odo 0.3.1
python-dateutil 2.5.0
pytz 2014.10
pytz 2015.2
pyyaml 3.11
pyzmq 14.5.0
readline 6.2
requests 2.11.1
rope 0.9.4
runipy 0.1.3
scikit-learn 0.19.1
scipy 0.14.0
scipy 0.18.1
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six 1.8.0
six 1.9.0
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toolz 0.7.1
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ujson 1.33
unicodecsv 0.9.4
watchdog 0.8.2
werkzeug 0.10.1
wheel 0.29.0
wsgiref 0.1.2
xlrd 0.9.3
xlsxwriter 0.6.7
xlwt 0.7.5

ubuntu/adduser 3.116ubuntu1
ubuntu/alien 8.95
ubuntu/apt-utils 1.6.14
ubuntu/apt 1.6.14
ubuntu/autoconf 2.69-11
ubuntu/automake 1:1.15.1-3ubuntu2
ubuntu/autopoint 0.19.8.1-6ubuntu0.3
ubuntu/autotools-dev 20180224.1
ubuntu/base-files 10.1ubuntu2.11
ubuntu/base-passwd 3.5.44
ubuntu/bash 4.4.18-2ubuntu1.3
ubuntu/bcl2fastq2 0v2.19.1.403-2
ubuntu/binfmt-support 2.1.8-2
ubuntu/binutils-common 2.30-21ubuntu1~18.04.7
ubuntu/binutils-x86-64-linux-gnu 2.30-21ubuntu1~18.04.7
ubuntu/binutils 2.30-21ubuntu1~18.04.7
ubuntu/blt 2.5.3 dfsg-4
ubuntu/bsdmainutils 11.1.2ubuntu1
ubuntu/bsdutils 1:2.31.1-0.4ubuntu3.7
ubuntu/build-essential 12.4ubuntu1
ubuntu/bzip2-doc 1.0.6-8.1ubuntu0.2
ubuntu/bzip2 1.0.6-8.1ubuntu0.2
ubuntu/ca-certificates 20211016~18.04.1
ubuntu/clang-6.0 1:6.0-1ubuntu2
ubuntu/coreutils 8.28-1ubuntu1
ubuntu/cpio 2.12 dfsg-6ubuntu0.18.04.4
ubuntu/cpp-7 7.5.0-3ubuntu1~18.04
ubuntu/cpp 4:7.4.0-1ubuntu2.3
ubuntu/curl 7.58.0-2ubuntu3.20
ubuntu/cwltool 1.0.20180302231433-1
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ubuntu/dash 0.5.8-2.10
ubuntu/dbus 1.12.2-1ubuntu1.3
ubuntu/debconf 1.5.66ubuntu1
ubuntu/debhelper 11.1.6ubuntu2
ubuntu/debianutils 4.8.4
ubuntu/debugedit 4.14.1 dfsg1-2
ubuntu/dh-autoreconf 17
ubuntu/dh-python 3.20180325ubuntu2
ubuntu/dh-strip-nondeterminism 0.040-1.1~build1
ubuntu/dialog 1.3-20171209-1
ubuntu/diffutils 1:3.6-1
ubuntu/dirmngr 2.2.4-1ubuntu1.6
ubuntu/distro-info-data 0.37ubuntu0.14
ubuntu/dpkg-dev 1.19.0.5ubuntu2.4
ubuntu/dpkg 1.19.0.5ubuntu2.4
ubuntu/e2fsprogs 1.44.1-1ubuntu1.4
ubuntu/fakeroot 1.22-2ubuntu1
ubuntu/fdisk 2.31.1-0.4ubuntu3.7
ubuntu/file 1:5.32-2ubuntu0.4
ubuntu/findutils 4.6.0 git 20170828-2
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ubuntu/fonts-dejavu-core 2.37-1
ubuntu/fonts-lyx 2.2.4-0ubuntu0.18.04.1
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ubuntu/gcc-6-base 6.5.0-2ubuntu1~18.04
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ubuntu/gcc-7-multilib 7.5.0-3ubuntu1~18.04
ubuntu/gcc-7 7.5.0-3ubuntu1~18.04
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ubuntu/gcc 4:7.4.0-1ubuntu2.3
ubuntu/gettext-base 0.19.8.1-6ubuntu0.3
ubuntu/gettext 0.19.8.1-6ubuntu0.3
ubuntu/gir1.2-glib-2.0 1.56.1-1
ubuntu/gir1.2-harfbuzz-0.0 1.7.2-1ubuntu1
ubuntu/git-lfs 2.3.4-1
ubuntu/git-man 1:2.17.1-1ubuntu0.12
ubuntu/git 1:2.17.1-1ubuntu0.12
ubuntu/gnupg-l10n 2.2.4-1ubuntu1.6
ubuntu/gnupg-utils 2.2.4-1ubuntu1.6
ubuntu/gnupg 2.2.4-1ubuntu1.6
ubuntu/gpg-agent 2.2.4-1ubuntu1.6
ubuntu/gpg-wks-client 2.2.4-1ubuntu1.6
ubuntu/gpg-wks-server 2.2.4-1ubuntu1.6
ubuntu/gpg 2.2.4-1ubuntu1.6
ubuntu/gpgconf 2.2.4-1ubuntu1.6
ubuntu/gpgsm 2.2.4-1ubuntu1.6
ubuntu/gpgv 2.2.4-1ubuntu1.6
ubuntu/grep 3.1-2build1
ubuntu/groff-base 1.22.3-10
ubuntu/gzip 1.6-5ubuntu1.2
ubuntu/hdf5-helpers 1.10.0-patch1 docs-4
ubuntu/hostname 3.20
ubuntu/icu-devtools 60.2-3ubuntu3.2
ubuntu/init-system-helpers 1.51
ubuntu/intltool-debian 0.35.0 20060710.4
ubuntu/javascript-common 11
ubuntu/krb5-locales 1.16-2ubuntu0.2
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ubuntu/python-xdg 0.25-4ubuntu1.1
ubuntu/python2.7-dev 2.7.17-1~18.04ubuntu1.8
ubuntu/python2.7-minimal 2.7.17-1~18.04ubuntu1.8
ubuntu/python2.7 2.7.17-1~18.04ubuntu1.8
ubuntu/python3-asn1crypto 0.24.0-1
ubuntu/python3-cffi-backend 1.11.5-1
ubuntu/python3-crypto 2.6.1-8ubuntu2
ubuntu/python3-cryptography 2.1.4-1ubuntu1.4
ubuntu/python3-dbus 1.2.6-1
ubuntu/python3-dev 3.6.7-1~18.04
ubuntu/python3-distutils 3.6.9-1~18.04
ubuntu/python3-gi 3.26.1-2ubuntu1
ubuntu/python3-idna 2.6-1
ubuntu/python3-keyring 10.6.0-1
ubuntu/python3-keyrings.alt 3.0-1
ubuntu/python3-lib2to3 3.6.9-1~18.04
ubuntu/python3-minimal 3.6.7-1~18.04
ubuntu/python3-pip 9.0.1-2.3~ubuntu1.18.04.5
ubuntu/python3-pkg-resources 39.0.1-2
ubuntu/python3-secretstorage 2.3.1-2
ubuntu/python3-setuptools 39.0.1-2
ubuntu/python3-six 1.11.0-2
ubuntu/python3-wheel 0.30.0-0.2
ubuntu/python3-xdg 0.25-4ubuntu1.1
ubuntu/python3.6-dev 3.6.9-1~18.04ubuntu1.8
ubuntu/python3.6-minimal 3.6.9-1~18.04ubuntu1.8
ubuntu/python3.6 3.6.9-1~18.04ubuntu1.8
ubuntu/python3 3.6.7-1~18.04
ubuntu/python 2.7.15~rc1-1
ubuntu/readline-common 7.0-3
ubuntu/rename 0.20-7
ubuntu/rpm-common 4.14.1 dfsg1-2
ubuntu/rpm2cpio 4.14.1 dfsg1-2
ubuntu/rpm 4.14.1 dfsg1-2
ubuntu/samtools 1.7-1
ubuntu/sed 4.4-2
ubuntu/sensible-utils 0.0.12
ubuntu/shared-mime-info 1.9-2
ubuntu/sysvinit-utils 2.88dsf-59.10ubuntu1
ubuntu/tar 1.29b-2ubuntu0.3
ubuntu/tk8.6-blt2.5 2.5.3 dfsg-4
ubuntu/ttf-bitstream-vera 1.10-8
ubuntu/tzdata 2022c-0ubuntu0.18.04.0
ubuntu/ubuntu-keyring 2018.09.18.1~18.04.2
ubuntu/ucf 3.0038
ubuntu/unzip 6.0-21ubuntu1.2
ubuntu/util-linux 2.31.1-0.4ubuntu3.7
ubuntu/wget 1.19.4-1ubuntu2.2
ubuntu/x11-common 1:7.7 19ubuntu7.1
ubuntu/x11proto-core-dev 2018.4-4
ubuntu/x11proto-dev 2018.4-4
ubuntu/x11proto-xext-dev 2018.4-4
ubuntu/xauth 1:1.0.10-1
ubuntu/xdg-user-dirs 0.17-1ubuntu1
ubuntu/xorg-sgml-doctools 1:1.11-1
ubuntu/xtrans-dev 1.3.5-1
ubuntu/xz-utils 5.2.2-1.3ubuntu0.1
ubuntu/zlib1g-dev 1:1.2.11.dfsg-0ubuntu2.2
ubuntu/zlib1g 1:1.2.11.dfsg-0ubuntu2.2
ubuntu/zsh-common 5.4.2-3ubuntu3.2
ubuntu/zsh 5.4.2-3ubuntu3.2

go 1.11
rust 1.40.0
rust 1.42.0

JamesIves/github-pages-deploy-action releases/v2
actions-rs/cargo v1
actions-rs/clippy-check v1
actions-rs/toolchain v1
actions/checkout master
actions/checkout v1
actions/checkout v2
actions/setup-python v1
addnab/docker-run-action v1
avto-dev/markdown-lint v1
azohra/shell-linter latest
docker/build-push-action v2
docker/login-action v1
docker/setup-buildx-action v1
github/super-linter v3
hecrj/setup-rust-action v1
satackey/action-docker-layer-caching v0.0.11
whoan/docker-build-with-cache-action v5

github.com/cloudfoundry/gosigar v1.1.0
github.com/dustin/go-humanize v0.0.0-20180713052910-9f541cc9db5d
github.com/google/shlex v0.0.0-20150127133951-6f45313302b9
github.com/martian-lang/docopt.go v0.0.0-20180828184714-57cc8f5f669d
github.com/satori/go.uuid v1.1.1-0.20160713180306-0aa62d5ddceb
golang.org/x/net v0.0.0-20190620200207-3b0461eec859
golang.org/x/sync v0.0.0-20190423024810-112230192c58
golang.org/x/sys v0.0.0-20190215142949-d0b11bdaac8a
golang.org/x/tools v0.0.0-20190628153133-6cdbf07be9d0
golang.org/x/tools v0.0.0-20190708203411-c8855242db9c

gettext:gettext *
libintl:libintl *