dhspence/docker-walker : latest
Haley's GATK
Latest release: about 7 years ago - 7,447 downloads - 541 dependencies
JSONDependencies
- gsalib 2.2
- ubuntu/adduser 3.113 nmu3ubuntu4
- ubuntu/ant-optional 1.9.6-1ubuntu1.1
- ubuntu/ant 1.9.6-1ubuntu1.1
- ubuntu/apt-utils 1.2.31
- ubuntu/apt 1.2.31
- ubuntu/base-files 9.4ubuntu4.8
- ubuntu/base-passwd 3.5.39
- ubuntu/bash 4.3-14ubuntu1.2
- ubuntu/bind9-host 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/binutils 2.26.1-1ubuntu1~16.04.8
- ubuntu/bsdutils 1:2.27.1-6ubuntu3.6
- ubuntu/build-essential 12.1ubuntu2
- ubuntu/bzip2 1.0.6-8
- ubuntu/ca-certificates-java 20160321ubuntu1
- ubuntu/ca-certificates 20170717~16.04.2
- ubuntu/coreutils 8.25-2ubuntu3~16.04
- ubuntu/cpp-5 5.4.0-6ubuntu1~16.04.11
- ubuntu/cpp 4:5.3.1-1ubuntu1
- ubuntu/cracklib-runtime 2.9.2-1ubuntu1
- ubuntu/dash 0.5.8-2.1ubuntu2
- ubuntu/dbus 1.10.6-1ubuntu3.3
- ubuntu/debconf 1.5.58ubuntu1
- ubuntu/debianutils 4.7
- ubuntu/default-jdk-headless 2:1.8-56ubuntu2
- ubuntu/default-jdk 2:1.8-56ubuntu2
- ubuntu/default-jre-headless 2:1.8-56ubuntu2
- ubuntu/default-jre 2:1.8-56ubuntu2
- ubuntu/diffutils 1:3.3-3
- ubuntu/dpkg-dev 1.18.4ubuntu1.5
- ubuntu/dpkg 1.18.4ubuntu1.5
- ubuntu/e2fslibs 1.42.13-1ubuntu1
- ubuntu/e2fsprogs 1.42.13-1ubuntu1
- ubuntu/expat 2.1.0-7ubuntu0.16.04.3
- ubuntu/fakeroot 1.20.2-1ubuntu1
- ubuntu/file 1:5.25-2ubuntu1.2
- ubuntu/findutils 4.6.0 git 20160126-2
- ubuntu/fontconfig-config 2.11.94-0ubuntu1.1
- ubuntu/fontconfig 2.11.94-0ubuntu1.1
- ubuntu/fonts-dejavu-core 2.35-1
- ubuntu/fonts-dejavu-extra 2.35-1
- ubuntu/g -5 5.4.0-6ubuntu1~16.04.11
- ubuntu/g 4:5.3.1-1ubuntu1
- ubuntu/gcc-5-base 5.4.0-6ubuntu1~16.04.11
- ubuntu/gcc-5-multilib 5.4.0-6ubuntu1~16.04.11
- ubuntu/gcc-5 5.4.0-6ubuntu1~16.04.11
- ubuntu/gcc-6-base 6.0.1-0ubuntu1
- ubuntu/gcc-multilib 4:5.3.1-1ubuntu1
- ubuntu/gcc 4:5.3.1-1ubuntu1
- ubuntu/geoip-database 20160408-1
- ubuntu/git-man 1:2.7.4-0ubuntu1.6
- ubuntu/git 1:2.7.4-0ubuntu1.6
- ubuntu/gnupg 1.4.20-1ubuntu3.3
- ubuntu/gpgv 1.4.20-1ubuntu3.3
- ubuntu/grep 2.25-1~16.04.1
- ubuntu/gzip 1.6-4ubuntu1
- ubuntu/hicolor-icon-theme 0.15-0ubuntu1.1
- ubuntu/hostname 3.16ubuntu2
- ubuntu/ifupdown 0.8.10ubuntu1.4
- ubuntu/init-system-helpers 1.29ubuntu4
- ubuntu/init 1.29ubuntu4
- ubuntu/initscripts 2.88dsf-59.3ubuntu2
- ubuntu/insserv 1.14.0-5ubuntu3
- ubuntu/iproute2 4.3.0-1ubuntu3.16.04.4
- ubuntu/isc-dhcp-client 4.3.3-5ubuntu12.10
- ubuntu/isc-dhcp-common 4.3.3-5ubuntu12.10
- ubuntu/java-common 0.56ubuntu2
- ubuntu/krb5-locales 1.13.2 dfsg-5ubuntu2.1
- ubuntu/ldap-utils 2.4.42 dfsg-2ubuntu3.4
- ubuntu/less 481-2.1ubuntu0.2
- ubuntu/lib32asan2 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32atomic1 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32cilkrts5 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32gcc-5-dev 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32gcc1 1:6.0.1-0ubuntu1
- ubuntu/lib32gomp1 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32itm1 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32mpx0 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32quadmath0 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32stdc 6 5.4.0-6ubuntu1~16.04.11
- ubuntu/lib32ubsan0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libacl1 2.2.52-3
- ubuntu/libalgorithm-diff-perl 1.19.03-1
- ubuntu/libalgorithm-diff-xs-perl 0.04-4build1
- ubuntu/libalgorithm-merge-perl 0.08-3
- ubuntu/libapparmor1 2.10.95-0ubuntu2.10
- ubuntu/libapt-inst2.0 1.2.31
- ubuntu/libapt-pkg5.0 1.2.31
- ubuntu/libasan2 5.4.0-6ubuntu1~16.04.11
- ubuntu/libasn1-8-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libasound2-data 1.1.0-0ubuntu1
- ubuntu/libasound2 1.1.0-0ubuntu1
- ubuntu/libasyncns0 0.8-5build1
- ubuntu/libatk1.0-0 2.18.0-1
- ubuntu/libatk1.0-data 2.18.0-1
- ubuntu/libatm1 1:2.5.1-1.5
- ubuntu/libatomic1 5.4.0-6ubuntu1~16.04.11
- ubuntu/libattr1 1:2.4.47-2
- ubuntu/libaudit-common 1:2.4.5-1ubuntu2.1
- ubuntu/libaudit1 1:2.4.5-1ubuntu2.1
- ubuntu/libavahi-client3 0.6.32~rc dfsg-1ubuntu2.3
- ubuntu/libavahi-common-data 0.6.32~rc dfsg-1ubuntu2.3
- ubuntu/libavahi-common3 0.6.32~rc dfsg-1ubuntu2.3
- ubuntu/libbasicobjects0 0.5.0-1
- ubuntu/libbind9-140 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libblkid1 2.27.1-6ubuntu3.6
- ubuntu/libbsd0 0.8.2-1
- ubuntu/libbz2-1.0 1.0.6-8
- ubuntu/libc-ares2 1.10.0-3ubuntu0.2
- ubuntu/libc-bin 2.23-0ubuntu11
- ubuntu/libc-dev-bin 2.23-0ubuntu11
- ubuntu/libc6-dev-i386 2.23-0ubuntu11
- ubuntu/libc6-dev-x32 2.23-0ubuntu11
- ubuntu/libc6-dev 2.23-0ubuntu11
- ubuntu/libc6-i386 2.23-0ubuntu11
- ubuntu/libc6-x32 2.23-0ubuntu11
- ubuntu/libc6 2.23-0ubuntu11
- ubuntu/libcairo2 1.14.6-1
- ubuntu/libcap-ng0 0.7.7-1
- ubuntu/libcap2-bin 1:2.24-12
- ubuntu/libcap2 1:2.24-12
- ubuntu/libcc1-0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libcilkrts5 5.4.0-6ubuntu1~16.04.11
- ubuntu/libcollection4 0.5.0-1
- ubuntu/libcomerr2 1.42.13-1ubuntu1
- ubuntu/libcrack2 2.9.2-1ubuntu1
- ubuntu/libcryptsetup4 2:1.6.6-5ubuntu2.1
- ubuntu/libcups2 2.1.3-4ubuntu0.7
- ubuntu/libcurl3-gnutls 7.47.0-1ubuntu2.12
- ubuntu/libdatrie1 0.2.10-2
- ubuntu/libdb5.3 5.3.28-11ubuntu0.1
- ubuntu/libdbus-1-3 1.10.6-1ubuntu3.3
- ubuntu/libdebconfclient0 0.198ubuntu1
- ubuntu/libdevmapper1.02.1 2:1.02.110-1ubuntu10
- ubuntu/libdhash1 0.5.0-1
- ubuntu/libdns-export162 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libdns162 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libdpkg-perl 1.18.4ubuntu1.5
- ubuntu/libdrm-amdgpu1 2.4.91-2~16.04.1
- ubuntu/libdrm-common 2.4.91-2~16.04.1
- ubuntu/libdrm-intel1 2.4.91-2~16.04.1
- ubuntu/libdrm-nouveau2 2.4.91-2~16.04.1
- ubuntu/libdrm-radeon1 2.4.91-2~16.04.1
- ubuntu/libdrm2 2.4.91-2~16.04.1
- ubuntu/libedit2 3.1-20150325-1ubuntu2
- ubuntu/libelf1 0.165-3ubuntu1.1
- ubuntu/liberror-perl 0.17-1.2
- ubuntu/libexpat1-dev 2.1.0-7ubuntu0.16.04.3
- ubuntu/libexpat1 2.1.0-7ubuntu0.16.04.3
- ubuntu/libfakeroot 1.20.2-1ubuntu1
- ubuntu/libfdisk1 2.27.1-6ubuntu3.6
- ubuntu/libffi6 3.2.1-4
- ubuntu/libfile-fcntllock-perl 0.22-3
- ubuntu/libflac8 1.3.1-4
- ubuntu/libfontconfig1 2.11.94-0ubuntu1.1
- ubuntu/libfreetype6 2.6.1-0.1ubuntu2.3
- ubuntu/libgcc-5-dev 5.4.0-6ubuntu1~16.04.11
- ubuntu/libgcc1 1:6.0.1-0ubuntu1
- ubuntu/libgcrypt20 1.6.5-2ubuntu0.5
- ubuntu/libgdbm3 1.8.3-13.1
- ubuntu/libgdk-pixbuf2.0-0 2.32.2-1ubuntu1.6
- ubuntu/libgdk-pixbuf2.0-common 2.32.2-1ubuntu1.6
- ubuntu/libgeoip1 1.6.9-1
- ubuntu/libgif7 5.1.4-0.3~16.04
- ubuntu/libgl1-mesa-dri 18.0.5-0ubuntu0~16.04.1
- ubuntu/libgl1-mesa-glx 18.0.5-0ubuntu0~16.04.1
- ubuntu/libglapi-mesa 18.0.5-0ubuntu0~16.04.1
- ubuntu/libglib2.0-0 2.48.2-0ubuntu4.1
- ubuntu/libglib2.0-data 2.48.2-0ubuntu4.1
- ubuntu/libgmp10 2:6.1.0 dfsg-2
- ubuntu/libgnutls30 3.4.10-4ubuntu1.4
- ubuntu/libgomp1 5.4.0-6ubuntu1~16.04.11
- ubuntu/libgpg-error0 1.21-2ubuntu1
- ubuntu/libgraphite2-3 1.3.10-0ubuntu0.16.04.1
- ubuntu/libgssapi-krb5-2 1.13.2 dfsg-5ubuntu2.1
- ubuntu/libgssapi3-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libgtk2.0-0 2.24.30-1ubuntu1.16.04.2
- ubuntu/libgtk2.0-bin 2.24.30-1ubuntu1.16.04.2
- ubuntu/libgtk2.0-common 2.24.30-1ubuntu1.16.04.2
- ubuntu/libharfbuzz0b 1.0.1-1ubuntu0.1
- ubuntu/libhcrypto4-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libheimbase1-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libheimntlm0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libhogweed4 3.2-1ubuntu0.16.04.1
- ubuntu/libhx509-5-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libice-dev 2:1.0.9-1
- ubuntu/libice6 2:1.0.9-1
- ubuntu/libicu55 55.1-7ubuntu0.4
- ubuntu/libidn11 1.32-3ubuntu1.2
- ubuntu/libini-config5 0.5.0-1
- ubuntu/libipa-hbac0 1.13.4-1ubuntu1.12
- ubuntu/libisc-export160 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libisc160 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libisccc140 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libisccfg140 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/libisl15 0.16.1-1
- ubuntu/libitm1 5.4.0-6ubuntu1~16.04.11
- ubuntu/libjbig0 2.1-3.1
- ubuntu/libjpeg-turbo8 1.4.2-0ubuntu3.1
- ubuntu/libjpeg8 8c-2ubuntu8
- ubuntu/libjson-c2 0.11-4ubuntu2
- ubuntu/libk5crypto3 1.13.2 dfsg-5ubuntu2.1
- ubuntu/libkeyutils1 1.5.9-8ubuntu1
- ubuntu/libkmod2 22-1ubuntu5.2
- ubuntu/libkrb5-26-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libkrb5-3 1.13.2 dfsg-5ubuntu2.1
- ubuntu/libkrb5support0 1.13.2 dfsg-5ubuntu2.1
- ubuntu/liblcms2-2 2.6-3ubuntu2.1
- ubuntu/libldap-2.4-2 2.4.42 dfsg-2ubuntu3.4
- ubuntu/libldb1 2:1.1.24-1ubuntu3.1
- ubuntu/libllvm6.0 1:6.0-1ubuntu2~16.04.1
- ubuntu/liblsan0 5.4.0-6ubuntu1~16.04.11
- ubuntu/liblwres141 1:9.10.3.dfsg.P4-8ubuntu1.12
- ubuntu/liblz4-1 0.0~r131-2ubuntu2
- ubuntu/liblzma5 5.1.1alpha 20120614-2ubuntu2
- ubuntu/libmagic1 1:5.25-2ubuntu1.2
- ubuntu/libmnl0 1.0.3-5
- ubuntu/libmount1 2.27.1-6ubuntu3.6
- ubuntu/libmpc3 1.0.3-1
- ubuntu/libmpfr4 3.1.4-1
- ubuntu/libmpx0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libncurses5-dev 6.0 20160213-1ubuntu1
- ubuntu/libncurses5 6.0 20160213-1ubuntu1
- ubuntu/libncursesw5 6.0 20160213-1ubuntu1
- ubuntu/libnettle6 3.2-1ubuntu0.16.04.1
- ubuntu/libnfsidmap2 0.25-5
- ubuntu/libnl-3-200 3.2.27-1ubuntu0.16.04.1
- ubuntu/libnl-route-3-200 3.2.27-1ubuntu0.16.04.1
- ubuntu/libnspr4 2:4.13.1-0ubuntu0.16.04.1
- ubuntu/libnss-sss 1.13.4-1ubuntu1.12
- ubuntu/libnss3-nssdb 2:3.28.4-0ubuntu0.16.04.5
- ubuntu/libnss3 2:3.28.4-0ubuntu0.16.04.5
- ubuntu/libogg0 1.3.2-1
- ubuntu/libp11-kit0 0.23.2-5~ubuntu16.04.1
- ubuntu/libpam-modules-bin 1.1.8-3.2ubuntu2.1
- ubuntu/libpam-modules 1.1.8-3.2ubuntu2.1
- ubuntu/libpam-pwquality 1.3.0-0ubuntu1
- ubuntu/libpam-runtime 1.1.8-3.2ubuntu2.1
- ubuntu/libpam-sss 1.13.4-1ubuntu1.12
- ubuntu/libpam0g 1.1.8-3.2ubuntu2.1
- ubuntu/libpango-1.0-0 1.38.1-1
- ubuntu/libpangocairo-1.0-0 1.38.1-1
- ubuntu/libpangoft2-1.0-0 1.38.1-1
- ubuntu/libpath-utils1 0.5.0-1
- ubuntu/libpciaccess0 0.13.4-1
- ubuntu/libpcre3 2:8.38-3.1
- ubuntu/libpcsclite1 1.8.14-1ubuntu1.16.04.1
- ubuntu/libperl5.22 5.22.1-9ubuntu0.6
- ubuntu/libpixman-1-0 0.33.6-1
- ubuntu/libpng12-0 1.2.54-1ubuntu1.1
- ubuntu/libpopt0 1.16-10
- ubuntu/libprocps4 2:3.3.10-4ubuntu2.4
- ubuntu/libpthread-stubs0-dev 0.3-4
- ubuntu/libpulse0 1:8.0-0ubuntu3.10
- ubuntu/libpwquality-common 1.3.0-0ubuntu1
- ubuntu/libpwquality1 1.3.0-0ubuntu1
- ubuntu/libpython-stdlib 2.7.12-1~16.04
- ubuntu/libpython2.7-minimal 2.7.12-1ubuntu0~16.04.4
- ubuntu/libpython2.7-stdlib 2.7.12-1ubuntu0~16.04.4
- ubuntu/libpython2.7 2.7.12-1ubuntu0~16.04.4
- ubuntu/libquadmath0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libreadline6 6.3-8ubuntu2
- ubuntu/libref-array1 0.5.0-1
- ubuntu/libroken18-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/librtmp1 2.4 20151223.gitfa8646d-1ubuntu0.1
- ubuntu/libsasl2-2 2.1.26.dfsg1-14ubuntu0.1
- ubuntu/libsasl2-modules-db 2.1.26.dfsg1-14ubuntu0.1
- ubuntu/libsasl2-modules-gssapi-mit 2.1.26.dfsg1-14ubuntu0.1
- ubuntu/libsasl2-modules 2.1.26.dfsg1-14ubuntu0.1
- ubuntu/libseccomp2 2.3.1-2.1ubuntu2~16.04.1
- ubuntu/libselinux1 2.4-3build2
- ubuntu/libsemanage-common 2.3-1build3
- ubuntu/libsemanage1 2.3-1build3
- ubuntu/libsensors4 1:3.4.0-2
- ubuntu/libsepol1 2.4-2
- ubuntu/libsm-dev 2:1.2.2-1
- ubuntu/libsm6 2:1.2.2-1
- ubuntu/libsmartcols1 2.27.1-6ubuntu3.6
- ubuntu/libsmbclient 2:4.3.11 dfsg-0ubuntu0.16.04.18
- ubuntu/libsndfile1 1.0.25-10ubuntu0.16.04.1
- ubuntu/libsqlite3-0 3.11.0-1ubuntu1.1
- ubuntu/libss2 1.42.13-1ubuntu1
- ubuntu/libssl1.0.0 1.0.2g-1ubuntu4.15
- ubuntu/libsss-idmap0 1.13.4-1ubuntu1.12
- ubuntu/libsss-nss-idmap0 1.13.4-1ubuntu1.12
- ubuntu/libsss-sudo 1.13.4-1ubuntu1.12
- ubuntu/libstdc -5-dev 5.4.0-6ubuntu1~16.04.11
- ubuntu/libstdc 6 5.4.0-6ubuntu1~16.04.11
- ubuntu/libsystemd0 229-4ubuntu21.16
- ubuntu/libtalloc2 2.1.5-2
- ubuntu/libtasn1-6 4.7-3ubuntu0.16.04.3
- ubuntu/libtdb1 1.3.8-2
- ubuntu/libtevent0 0.9.28-0ubuntu0.16.04.1
- ubuntu/libthai-data 0.1.24-2
- ubuntu/libthai0 0.1.24-2
- ubuntu/libtiff5 4.0.6-1ubuntu0.6
- ubuntu/libtinfo-dev 6.0 20160213-1ubuntu1
- ubuntu/libtinfo5 6.0 20160213-1ubuntu1
- ubuntu/libtsan0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libtxc-dxtn-s2tc0 0~git20131104-1.1
- ubuntu/libubsan0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libudev1 229-4ubuntu21.16
- ubuntu/libusb-0.1-4 2:0.1.12-28
- ubuntu/libustr-1.0-1 1.0.4-5
- ubuntu/libuuid1 2.27.1-6ubuntu3.6
- ubuntu/libuv1 1.8.0-1
- ubuntu/libvorbis0a 1.3.5-3ubuntu0.2
- ubuntu/libvorbisenc2 1.3.5-3ubuntu0.2
- ubuntu/libwbclient0 2:4.3.11 dfsg-0ubuntu0.16.04.18
- ubuntu/libwind0-heimdal 1.7~git20150920 dfsg-4ubuntu1.16.04.1
- ubuntu/libwrap0 7.6.q-25
- ubuntu/libx11-6 2:1.6.3-1ubuntu2.1
- ubuntu/libx11-data 2:1.6.3-1ubuntu2.1
- ubuntu/libx11-dev 2:1.6.3-1ubuntu2.1
- ubuntu/libx11-doc 2:1.6.3-1ubuntu2.1
- ubuntu/libx11-xcb1 2:1.6.3-1ubuntu2.1
- ubuntu/libx32asan2 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32atomic1 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32cilkrts5 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32gcc-5-dev 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32gcc1 1:6.0.1-0ubuntu1
- ubuntu/libx32gomp1 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32itm1 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32quadmath0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32stdc 6 5.4.0-6ubuntu1~16.04.11
- ubuntu/libx32ubsan0 5.4.0-6ubuntu1~16.04.11
- ubuntu/libxau-dev 1:1.0.8-1
- ubuntu/libxau6 1:1.0.8-1
- ubuntu/libxcb-dri2-0 1.11.1-1ubuntu1
- ubuntu/libxcb-dri3-0 1.11.1-1ubuntu1
- ubuntu/libxcb-glx0 1.11.1-1ubuntu1
- ubuntu/libxcb-present0 1.11.1-1ubuntu1
- ubuntu/libxcb-render0 1.11.1-1ubuntu1
- ubuntu/libxcb-shm0 1.11.1-1ubuntu1
- ubuntu/libxcb-sync1 1.11.1-1ubuntu1
- ubuntu/libxcb1-dev 1.11.1-1ubuntu1
- ubuntu/libxcb1 1.11.1-1ubuntu1
- ubuntu/libxcomposite1 1:0.4.4-1
- ubuntu/libxcursor1 1:1.1.14-1ubuntu0.16.04.2
- ubuntu/libxdamage1 1:1.1.4-2
- ubuntu/libxdmcp-dev 1:1.1.2-1.1
- ubuntu/libxdmcp6 1:1.1.2-1.1
- ubuntu/libxext6 2:1.3.3-1
- ubuntu/libxfixes3 1:5.0.1-2
- ubuntu/libxi6 2:1.7.6-1
- ubuntu/libxinerama1 2:1.1.3-1
- ubuntu/libxml2 2.9.3 dfsg1-1ubuntu0.6
- ubuntu/libxmuu1 2:1.1.2-2
- ubuntu/libxrandr2 2:1.5.0-1
- ubuntu/libxrender1 1:0.9.9-0ubuntu1
- ubuntu/libxshmfence1 1.2-1
- ubuntu/libxt-dev 1:1.1.5-0ubuntu1
- ubuntu/libxt6 1:1.1.5-0ubuntu1
- ubuntu/libxtables11 1.6.0-2ubuntu3
- ubuntu/libxtst6 2:1.2.2-1
- ubuntu/libxxf86vm1 1:1.1.4-1
- ubuntu/linux-libc-dev 4.4.0-143.169
- ubuntu/login 1:4.2-3.1ubuntu5.3
- ubuntu/lsb-base 9.20160110ubuntu0.2
- ubuntu/make 4.1-6
- ubuntu/makedev 2.3.1-93ubuntu2~ubuntu16.04.1
- ubuntu/manpages-dev 4.04-2
- ubuntu/manpages 4.04-2
- ubuntu/mawk 1.3.3-17ubuntu2
- ubuntu/mime-support 3.59ubuntu1
- ubuntu/mount 2.27.1-6ubuntu3.6
- ubuntu/multiarch-support 2.23-0ubuntu11
- ubuntu/ncurses-base 6.0 20160213-1ubuntu1
- ubuntu/ncurses-bin 6.0 20160213-1ubuntu1
- ubuntu/netbase 5.3
- ubuntu/nodejs 4.2.6~dfsg-1ubuntu4.2
- ubuntu/openjdk-8-jdk-headless 8u191-b12-2ubuntu0.16.04.1
- ubuntu/openjdk-8-jdk 8u191-b12-2ubuntu0.16.04.1
- ubuntu/openjdk-8-jre-headless 8u191-b12-2ubuntu0.16.04.1
- ubuntu/openjdk-8-jre 8u191-b12-2ubuntu0.16.04.1
- ubuntu/openssh-client 1:7.2p2-4ubuntu2.8
- ubuntu/openssl 1.0.2g-1ubuntu4.15
- ubuntu/passwd 1:4.2-3.1ubuntu5.3
- ubuntu/patch 2.7.5-1ubuntu0.16.04.1
- ubuntu/perl-base 5.22.1-9ubuntu0.6
- ubuntu/perl-modules-5.22 5.22.1-9ubuntu0.6
- ubuntu/perl 5.22.1-9ubuntu0.6
- ubuntu/procps 2:3.3.10-4ubuntu2.4
- ubuntu/python-minimal 2.7.12-1~16.04
- ubuntu/python-sss 1.13.4-1ubuntu1.12
- ubuntu/python-talloc 2.1.5-2
- ubuntu/python2.7-minimal 2.7.12-1ubuntu0~16.04.4
- ubuntu/python2.7 2.7.12-1ubuntu0~16.04.4
- ubuntu/python 2.7.12-1~16.04
- ubuntu/readline-common 6.3-8ubuntu2
- ubuntu/rename 0.20-4
- ubuntu/rsync 3.1.1-3ubuntu1.2
- ubuntu/samba-libs 2:4.3.11 dfsg-0ubuntu0.16.04.18
- ubuntu/sed 4.2.2-7
- ubuntu/sensible-utils 0.0.9ubuntu0.16.04.1
- ubuntu/sgml-base 1.26 nmu4ubuntu1
- ubuntu/shared-mime-info 1.5-2ubuntu0.2
- ubuntu/sssd-ad-common 1.13.4-1ubuntu1.12
- ubuntu/sssd-ad 1.13.4-1ubuntu1.12
- ubuntu/sssd-common 1.13.4-1ubuntu1.12
- ubuntu/sssd-ipa 1.13.4-1ubuntu1.12
- ubuntu/sssd-krb5-common 1.13.4-1ubuntu1.12
- ubuntu/sssd-krb5 1.13.4-1ubuntu1.12
- ubuntu/sssd-ldap 1.13.4-1ubuntu1.12
- ubuntu/sssd-proxy 1.13.4-1ubuntu1.12
- ubuntu/sssd 1.13.4-1ubuntu1.12
- ubuntu/systemd-sysv 229-4ubuntu21.16
- ubuntu/systemd 229-4ubuntu21.16
- ubuntu/sysv-rc 2.88dsf-59.3ubuntu2
- ubuntu/sysvinit-utils 2.88dsf-59.3ubuntu2
- ubuntu/tar 1.28-2.1ubuntu0.1
- ubuntu/tcpd 7.6.q-25
- ubuntu/tzdata 2018i-0ubuntu0.16.04
- ubuntu/ubuntu-keyring 2012.05.19
- ubuntu/ucf 3.0036
- ubuntu/unzip 6.0-20ubuntu1
- ubuntu/util-linux 2.27.1-6ubuntu3.6
- ubuntu/wamerican 7.1-1
- ubuntu/wget 1.17.1-1ubuntu1.4
- ubuntu/x11-common 1:7.7 13ubuntu3.1
- ubuntu/x11proto-core-dev 7.0.31-1~ubuntu16.04.2
- ubuntu/x11proto-input-dev 2.3.1-1
- ubuntu/x11proto-kb-dev 1.0.7-0ubuntu1
- ubuntu/xauth 1:1.0.9-1ubuntu2
- ubuntu/xdg-user-dirs 0.15-2ubuntu6.16.04.1
- ubuntu/xml-core 0.13 nmu2
- ubuntu/xorg-sgml-doctools 1:1.11-1
- ubuntu/xtrans-dev 1.3.5-1
- ubuntu/xz-utils 5.1.1alpha 20120614-2ubuntu2
- ubuntu/zlib1g-dev 1:1.2.8.dfsg-2ubuntu4.1
- ubuntu/zlib1g 1:1.2.8.dfsg-2ubuntu4.1
- ${project.groupId}:${gatk.packagetests.artifactId} ${project.version}
- ${project.groupId}:gatk-engine ${project.version}
- ${project.groupId}:gatk-queue-extensions-generator ${project.version}
- ${project.groupId}:gatk-queue ${project.version}
- ${project.groupId}:gatk-tools-public ${project.version}
- ${project.groupId}:gatk-utils ${project.version}
- ${project.groupId}:gsalib ${project.version}
- US_export_policy:US_export_policy *
- charsets:charsets *
- cldrdata:cldrdata *
- cofoja:cofoja 1.2-20140817
- colt:colt *
- com.github.broadinstitute:picard *
- com.github.samtools:htsjdk *
- com.google.caliper:caliper *
- com.google.code.cofoja:cofoja *
- com.google.code.gson:gson *
- com.google.guava:guava 11.0.2
- com.google.inject:guice *
- com.jamesmurty.utils:java-xmlbuilder 0.4
- com.sun:jce 1.8.0_191
- com.sun:sunec 1.8.0_191
- com.sun:sunjce_provider 1.8.0_191
- com.sun:sunpkcs11 1.8.0_191
- com.sun:tools *
- commons-codec:commons-codec 1.4
- commons-collections:commons-collections *
- commons-collections:commons-collections 3.2.1
- commons-io:commons-io *
- commons-io:commons-io 2.1
- commons-lang:commons-lang *
- commons-lang:commons-lang 2.5
- commons-logging:commons-logging 1.1.1
- dnsns:dnsns *
- dt:dt *
- icedtea-sound:icedtea-sound *
- it.unimi.dsi:fastutil *
- jaccess:jaccess *
- javax.mail:mail *
- jconsole:jconsole *
- jsse:jsse 1.8.0_191
- local_policy:local_policy *
- localedata:localedata *
- log4j:log4j *
- log4j:log4j 1.2.15
- management-agent:management-agent *
- nashorn:nashorn 1.8.0_191-8u191-b12-2ubuntu0.16.04.1-b12
- net.java.dev.jets3t:jets3t *
- net.java.dev.jna:jna *
- net.sf.jgrapht:jgrapht *
- org.apache.ant:ant-antlr 1.9.6
- org.apache.ant:ant-apache-bcel 1.9.6
- org.apache.ant:ant-apache-bsf 1.9.6
- org.apache.ant:ant-apache-log4j 1.9.6
- org.apache.ant:ant-apache-oro 1.9.6
- org.apache.ant:ant-apache-regexp 1.9.6
- org.apache.ant:ant-apache-resolver 1.9.6
- org.apache.ant:ant-apache-xalan2 1.9.6
- org.apache.ant:ant-commons-logging 1.9.6
- org.apache.ant:ant-commons-net 1.9.6
- org.apache.ant:ant-javamail 1.9.6
- org.apache.ant:ant-jdepend 1.9.6
- org.apache.ant:ant-jmf 1.9.6
- org.apache.ant:ant-jsch 1.9.6
- org.apache.ant:ant-junit4 1.9.6
- org.apache.ant:ant-junit 1.9.6
- org.apache.ant:ant-launcher 1.9.6
- org.apache.ant:ant-swing 1.9.6
- org.apache.ant:ant-testutil 1.9.6
- org.apache.ant:ant 1.9.6
- org.apache.commons:commons-compress 1.4.1
- org.apache.commons:commons-email *
- org.apache.commons:commons-jexl *
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-math *
- org.apache.commons:commons-math3 *
- org.apache.commons:commons-math3 3.5
- org.apache.commons:commons-math 2.2
- org.apache.httpcomponents:httpclient *
- org.apache.httpcomponents:httpclient 4.1.1
- org.apache.httpcomponents:httpcore 4.1
- org.apache.tools.ant.Main:ant-bootstrap *
- org.broadinstitute.gatk.engine.CommandLineGATK:gatk_hja 0612
- org.broadinstitute.gatk:gatk-engine 3.6
- org.broadinstitute.gatk:gatk-tools-public 3.6
- org.broadinstitute.gatk:gatk-utils 3.6
- org.debian.security.UpdateCertificates:ca-certificates-java *
- org.freemarker:freemarker *
- org.javassist:javassist 3.16.1-GA
- org.mycompany.app:external-example 1.0-SNAPSHOT
- org.reflections:reflections *
- org.reflections:reflections 0.9.9-RC1
- org.scala-lang:scala-compiler *
- org.simpleframework:simple-xml *
- org.simpleframework:simple-xml 2.0.4
- org.slf4j:slf4j-api *
- org.slf4j:slf4j-api 1.6.1
- org.testng:testng *
- org.testng:testng 6.8
- org.uncommons:reportng *
- org.xerial.snappy:snappy-java 1.0.3-rc3
- resources:resources 1.8.0_191
- rt:rt 1.8.0_191
- sa-jdi:sa-jdi *
- snpeff:snpeff 2.0.5
- tools:tools *
- us.levk:drmaa-common 1.0
- us.levk:drmaa-gridengine *
- us.levk:drmaa-gridengine 6.2u5
- zipfs:zipfs 1.8.0_191