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alexwaldrop/prepare_metaxcan_input : 39673a1fde1b6485392202b243b66ecb1a0e9828
Utility for converting gene-by-gene GWAS output to dbSNP ids for MetaXcan
Latest release: about 6 years ago - 1,656 downloads - 460 dependencies
JSONDependencies
- KernSmooth 2.23-15
- MASS 7.3-51.1
- Matrix 1.2-15
- Rcpp 1.0.0
- base 3.5.1
- boot 1.3-20
- class 7.3-14
- cluster 2.0.7-1
- codetools 0.2-15
- compiler 3.5.1
- datasets 3.5.1
- foreign 0.8-70
- grDevices 3.5.1
- graphics 3.5.1
- grid 3.5.1
- lattice 0.20-38
- methods 3.5.1
- mgcv 1.8-26
- nlme 3.1-137
- nnet 7.3-12
- parallel 3.5.1
- plyr 1.8.4
- rpart 4.1-13
- spatial 7.3-11
- splines 3.5.1
- stats4 3.5.1
- stats 3.5.1
- survival 2.43-3
- tcltk 3.5.1
- testRcppClass 0.1
- testRcppInterfaceExporter 0.1.0
- testRcppInterfaceUser 0.1.0
- testRcppModule 0.1
- testRcppPackage 0.1.0
- tools 3.5.1
- translations 3.5.1
- utils 3.5.1
- ubuntu/adduser 3.116ubuntu1
- ubuntu/apt 1.6.6
- ubuntu/base-files 10.1ubuntu2.3
- ubuntu/base-passwd 3.5.44
- ubuntu/bash 4.4.18-2ubuntu1
- ubuntu/binutils-common 2.30-21ubuntu1~18.04
- ubuntu/binutils-x86-64-linux-gnu 2.30-21ubuntu1~18.04
- ubuntu/binutils 2.30-21ubuntu1~18.04
- ubuntu/bsdutils 1:2.31.1-0.4ubuntu3.2
- ubuntu/build-essential 12.4ubuntu1
- ubuntu/bzip2-doc 1.0.6-8.1
- ubuntu/bzip2 1.0.6-8.1
- ubuntu/ca-certificates 20180409
- ubuntu/coreutils 8.28-1ubuntu1
- ubuntu/cpp-7 7.3.0-27ubuntu1~18.04
- ubuntu/cpp 4:7.3.0-3ubuntu2.1
- ubuntu/dash 0.5.8-2.10
- ubuntu/dbus 1.12.2-1ubuntu1
- ubuntu/debconf 1.5.66
- ubuntu/debianutils 4.8.4
- ubuntu/diffutils 1:3.6-1
- ubuntu/dirmngr 2.2.4-1ubuntu1.1
- ubuntu/dpkg-dev 1.19.0.5ubuntu2.1
- ubuntu/dpkg 1.19.0.5ubuntu2.1
- ubuntu/e2fsprogs 1.44.1-1
- ubuntu/fakeroot 1.22-2ubuntu1
- ubuntu/fdisk 2.31.1-0.4ubuntu3.2
- ubuntu/file 1:5.32-2ubuntu0.1
- ubuntu/findutils 4.6.0 git 20170828-2
- ubuntu/fontconfig-config 2.12.6-0ubuntu2
- ubuntu/fontconfig 2.12.6-0ubuntu2
- ubuntu/fonts-dejavu-core 2.37-1
- ubuntu/fonts-texgyre 20160520-1
- ubuntu/g -7 7.3.0-27ubuntu1~18.04
- ubuntu/g 4:7.3.0-3ubuntu2.1
- ubuntu/gcc-7-base 7.3.0-27ubuntu1~18.04
- ubuntu/gcc-7 7.3.0-27ubuntu1~18.04
- ubuntu/gcc-8-base 8.2.0-1ubuntu2~18.04
- ubuntu/gcc 4:7.3.0-3ubuntu2.1
- ubuntu/gfortran-7 7.3.0-27ubuntu1~18.04
- ubuntu/gfortran 4:7.3.0-3ubuntu2.1
- ubuntu/gir1.2-glib-2.0 1.56.1-1
- ubuntu/gir1.2-harfbuzz-0.0 1.7.2-1ubuntu1
- ubuntu/git-man 1:2.17.1-1ubuntu0.4
- ubuntu/git 1:2.17.1-1ubuntu0.4
- ubuntu/gnupg-l10n 2.2.4-1ubuntu1.1
- ubuntu/gnupg-utils 2.2.4-1ubuntu1.1
- ubuntu/gnupg2 2.2.4-1ubuntu1.1
- ubuntu/gnupg 2.2.4-1ubuntu1.1
- ubuntu/gpg-agent 2.2.4-1ubuntu1.1
- ubuntu/gpg-wks-client 2.2.4-1ubuntu1.1
- ubuntu/gpg-wks-server 2.2.4-1ubuntu1.1
- ubuntu/gpg 2.2.4-1ubuntu1.1
- ubuntu/gpgconf 2.2.4-1ubuntu1.1
- ubuntu/gpgsm 2.2.4-1ubuntu1.1
- ubuntu/gpgv 2.2.4-1ubuntu1.1
- ubuntu/grep 3.1-2
- ubuntu/gzip 1.6-5ubuntu1
- ubuntu/hostname 3.20
- ubuntu/icu-devtools 60.2-3ubuntu3
- ubuntu/init-system-helpers 1.51
- ubuntu/krb5-locales 1.16-2build1
- ubuntu/less 487-0.1
- ubuntu/libacl1 2.2.52-3build1
- ubuntu/libalgorithm-diff-perl 1.19.03-1
- ubuntu/libalgorithm-diff-xs-perl 0.04-5
- ubuntu/libalgorithm-merge-perl 0.08-3
- ubuntu/libapparmor1 2.12-4ubuntu5.1
- ubuntu/libapt-pkg5.0 1.6.6
- ubuntu/libasan4 7.3.0-27ubuntu1~18.04
- ubuntu/libasn1-8-heimdal 7.5.0 dfsg-1
- ubuntu/libassuan0 2.5.1-2
- ubuntu/libatomic1 8.2.0-1ubuntu2~18.04
- ubuntu/libattr1 1:2.4.47-2build1
- ubuntu/libaudit-common 1:2.8.2-1ubuntu1
- ubuntu/libaudit1 1:2.8.2-1ubuntu1
- ubuntu/libauthen-sasl-perl 2.1600-1
- ubuntu/libbinutils 2.30-21ubuntu1~18.04
- ubuntu/libblas-dev 3.7.1-4ubuntu1
- ubuntu/libblas3 3.7.1-4ubuntu1
- ubuntu/libblkid1 2.31.1-0.4ubuntu3.2
- ubuntu/libbsd0 0.8.7-1
- ubuntu/libbz2-1.0 1.0.6-8.1
- ubuntu/libbz2-dev 1.0.6-8.1
- ubuntu/libc-bin 2.27-3ubuntu1
- ubuntu/libc-dev-bin 2.27-3ubuntu1
- ubuntu/libc6-dev 2.27-3ubuntu1
- ubuntu/libc6 2.27-3ubuntu1
- ubuntu/libcairo2 1.15.10-2
- ubuntu/libcap-ng0 0.7.7-3.1
- ubuntu/libcc1-0 8.2.0-1ubuntu2~18.04
- ubuntu/libcilkrts5 7.3.0-27ubuntu1~18.04
- ubuntu/libcom-err2 1.44.1-1
- ubuntu/libcurl3-gnutls 7.58.0-2ubuntu3.5
- ubuntu/libcurl4 7.58.0-2ubuntu3.5
- ubuntu/libdata-dump-perl 1.23-1
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- ubuntu/libdbus-1-3 1.12.2-1ubuntu1
- ubuntu/libdebconfclient0 0.213ubuntu1
- ubuntu/libdpkg-perl 1.19.0.5ubuntu2.1
- ubuntu/libdrm-amdgpu1 2.4.91-2
- ubuntu/libdrm-common 2.4.91-2
- ubuntu/libdrm-intel1 2.4.91-2
- ubuntu/libdrm-nouveau2 2.4.91-2
- ubuntu/libdrm-radeon1 2.4.91-2
- ubuntu/libdrm2 2.4.91-2
- ubuntu/libedit2 3.1-20170329-1
- ubuntu/libelf1 0.170-0.4
- ubuntu/libencode-locale-perl 1.05-1
- ubuntu/liberror-perl 0.17025-1
- ubuntu/libexpat1 2.2.5-3
- ubuntu/libext2fs2 1.44.1-1
- ubuntu/libfakeroot 1.22-2ubuntu1
- ubuntu/libfdisk1 2.31.1-0.4ubuntu3.2
- ubuntu/libffi6 3.2.1-8
- ubuntu/libfile-basedir-perl 0.07-1
- ubuntu/libfile-desktopentry-perl 0.22-1
- ubuntu/libfile-fcntllock-perl 0.22-3build2
- ubuntu/libfile-listing-perl 6.04-1
- ubuntu/libfile-mimeinfo-perl 0.28-1
- ubuntu/libfont-afm-perl 1.20-2
- ubuntu/libfontconfig1 2.12.6-0ubuntu2
- ubuntu/libfontenc1 1:1.1.3-1
- ubuntu/libfreetype6 2.8.1-2ubuntu2
- ubuntu/libgcc-7-dev 7.3.0-27ubuntu1~18.04
- ubuntu/libgcc1 1:8.2.0-1ubuntu2~18.04
- ubuntu/libgcrypt20 1.8.1-4ubuntu1.1
- ubuntu/libgdbm-compat4 1.14.1-6
- ubuntu/libgdbm5 1.14.1-6
- ubuntu/libgfortran-7-dev 7.3.0-27ubuntu1~18.04
- ubuntu/libgfortran4 7.3.0-27ubuntu1~18.04
- ubuntu/libgirepository-1.0-1 1.56.1-1
- ubuntu/libgl1-mesa-dri 18.0.5-0ubuntu0~18.04.1
- ubuntu/libgl1-mesa-glx 18.0.5-0ubuntu0~18.04.1
- ubuntu/libgl1 1.0.0-2ubuntu2.2
- ubuntu/libglapi-mesa 18.0.5-0ubuntu0~18.04.1
- ubuntu/libglib2.0-0 2.56.3-0ubuntu0.18.04.1
- ubuntu/libglib2.0-bin 2.56.3-0ubuntu0.18.04.1
- ubuntu/libglib2.0-data 2.56.3-0ubuntu0.18.04.1
- ubuntu/libglib2.0-dev-bin 2.56.3-0ubuntu0.18.04.1
- ubuntu/libglib2.0-dev 2.56.3-0ubuntu0.18.04.1
- ubuntu/libglvnd0 1.0.0-2ubuntu2.2
- ubuntu/libglx-mesa0 18.0.5-0ubuntu0~18.04.1
- ubuntu/libglx0 1.0.0-2ubuntu2.2
- ubuntu/libgmp10 2:6.1.2 dfsg-2
- ubuntu/libgnutls30 3.5.18-1ubuntu1
- ubuntu/libgomp1 8.2.0-1ubuntu2~18.04
- ubuntu/libgpg-error0 1.27-6
- ubuntu/libgraphite2-3 1.3.11-2
- ubuntu/libgraphite2-dev 1.3.11-2
- ubuntu/libgssapi-krb5-2 1.16-2build1
- ubuntu/libgssapi3-heimdal 7.5.0 dfsg-1
- ubuntu/libharfbuzz-dev 1.7.2-1ubuntu1
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- ubuntu/libksba8 1.3.5-2
- ubuntu/liblapack-dev 3.7.1-4ubuntu1
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- ubuntu/libldap-common 2.4.45 dfsg-1ubuntu1.1
- ubuntu/libllvm6.0 1:6.0-1ubuntu2
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- ubuntu/liblsan0 8.2.0-1ubuntu2~18.04
- ubuntu/liblwp-mediatypes-perl 6.02-1
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- ubuntu/sensible-utils 0.0.12
- ubuntu/shared-mime-info 1.9-2
- ubuntu/sysvinit-utils 2.88dsf-59.10ubuntu1
- ubuntu/tar 1.29b-2
- ubuntu/tex-common 6.09
- ubuntu/texinfo 6.5.0.dfsg.1-2
- ubuntu/tzdata 2018g-0ubuntu0.18.04
- ubuntu/ubuntu-keyring 2018.02.28
- ubuntu/ucf 3.0038
- ubuntu/unzip 6.0-21ubuntu1
- ubuntu/util-linux 2.31.1-0.4ubuntu3.2
- ubuntu/vim-common 2:8.0.1453-1ubuntu1
- ubuntu/vim-tiny 2:8.0.1453-1ubuntu1
- ubuntu/wget 1.19.4-1ubuntu2.1
- ubuntu/x11-common 1:7.7 19ubuntu7.1
- ubuntu/x11-utils 7.7 3build1
- ubuntu/x11-xserver-utils 7.7 7build1
- ubuntu/xauth 1:1.0.10-1
- ubuntu/xdg-user-dirs 0.17-1ubuntu1
- ubuntu/xdg-utils 1.1.2-1ubuntu2.3
- ubuntu/xxd 2:8.0.1453-1ubuntu1
- ubuntu/xz-utils 5.2.2-1.3
- ubuntu/zip 3.0-11build1
- ubuntu/zlib1g-dev 1:1.2.11.dfsg-0ubuntu2
- ubuntu/zlib1g 1:1.2.11.dfsg-0ubuntu2