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openbiosim/notebook : 2023.4.0

This is the container that is behind the https://try.openbiosim.org notebook service

Ubuntu 22.04.3 LTS

Latest release: 11 months ago - 40 downloads - 1,450 dependencies

JSON

Dependencies

bash 5.1.16
python 3.11.6

gradle-wrapper:gradle-wrapper 2.10

@arcanis/slice-ansi 1.1.1
@babel/runtime 7.21.0
@chevrotain/types 9.1.0
@chevrotain/utils 9.1.0
@codemirror/autocomplete 6.5.1
@codemirror/commands 6.2.3
@codemirror/lang-cpp 6.0.2
@codemirror/lang-css 6.1.1
@codemirror/lang-html 6.4.3
@codemirror/lang-java 6.0.1
@codemirror/lang-javascript 6.1.7
@codemirror/lang-json 6.0.1
@codemirror/lang-markdown 6.1.1
@codemirror/lang-php 6.0.1
@codemirror/lang-python 6.1.3
@codemirror/lang-rust 6.0.1
@codemirror/lang-sql 6.4.1
@codemirror/lang-wast 6.0.1
@codemirror/lang-xml 6.0.2
@codemirror/language 6.8.0
@codemirror/legacy-modes 6.3.2
@codemirror/lint 6.2.0
@codemirror/search 6.3.0
@codemirror/state 6.2.0
@codemirror/view 6.9.6
@colors/colors 1.5.0
@dabh/diagnostics 2.0.3
@discoveryjs/json-ext 0.5.7
@fortawesome/fontawesome-free 5.15.4
@gar/promisify 1.1.3
@grpc/grpc-js 1.1.8
@grpc/proto-loader 0.5.5
@isaacs/cliui 8.0.2
@isaacs/string-locale-compare 1.1.0
@jridgewell/gen-mapping 0.3.2
@jridgewell/resolve-uri 3.1.0
@jridgewell/set-array 1.1.2
@jridgewell/source-map 0.3.2
@jridgewell/sourcemap-codec 1.4.14
@jridgewell/trace-mapping 0.3.17
@jupyter-notebook/lab-extension 7.0.4
@jupyter-widgets/jupyterlab-manager 5.0.9
@jupyter/ydoc 1.0.2
@jupyterlab/application-extension 4.0.6
@jupyterlab/application-top 0.0.0-use.local
@jupyterlab/application-top 4.0.6
@jupyterlab/application 4.0.6
@jupyterlab/apputils-extension 4.0.6
@jupyterlab/apputils 4.1.6
@jupyterlab/attachments 4.0.6
@jupyterlab/builder 4.0.6
@jupyterlab/buildutils 4.0.6
@jupyterlab/cell-toolbar-extension 4.0.6
@jupyterlab/cell-toolbar 4.0.6
@jupyterlab/cells 4.0.6
@jupyterlab/celltags-extension 4.0.6
@jupyterlab/codeeditor 4.0.6
@jupyterlab/codemirror-extension 4.0.6
@jupyterlab/codemirror 4.0.6
@jupyterlab/completer-extension 4.0.6
@jupyterlab/completer 4.0.6
@jupyterlab/console-extension 4.0.6
@jupyterlab/console 4.0.6
@jupyterlab/coreutils 6.0.6
@jupyterlab/csvviewer-extension 4.0.6
@jupyterlab/csvviewer 4.0.6
@jupyterlab/debugger-extension 4.0.6
@jupyterlab/debugger 4.0.6
@jupyterlab/docmanager-extension 4.0.6
@jupyterlab/docmanager 4.0.6
@jupyterlab/docregistry 4.0.6
@jupyterlab/documentsearch-extension 4.0.6
@jupyterlab/documentsearch 4.0.6
@jupyterlab/extensionmanager-extension 4.0.6
@jupyterlab/extensionmanager 4.0.6
@jupyterlab/filebrowser-extension 4.0.6
@jupyterlab/filebrowser 4.0.6
@jupyterlab/fileeditor-extension 4.0.6
@jupyterlab/fileeditor 4.0.6
@jupyterlab/galata-extension 5.0.5
@jupyterlab/help-extension 4.0.6
@jupyterlab/htmlviewer-extension 4.0.6
@jupyterlab/htmlviewer 4.0.6
@jupyterlab/hub-extension 4.0.6
@jupyterlab/imageviewer-extension 4.0.6
@jupyterlab/imageviewer 4.0.6
@jupyterlab/inspector-extension 4.0.6
@jupyterlab/inspector 4.0.6
@jupyterlab/javascript-extension 4.0.6
@jupyterlab/json-extension 4.0.6
@jupyterlab/launcher-extension 4.0.6
@jupyterlab/launcher 4.0.6
@jupyterlab/logconsole-extension 4.0.6
@jupyterlab/logconsole 4.0.6
@jupyterlab/lsp-extension 4.0.6
@jupyterlab/lsp 4.0.6
@jupyterlab/mainmenu-extension 4.0.6
@jupyterlab/mainmenu 4.0.6
@jupyterlab/markdownviewer-extension 4.0.6
@jupyterlab/markdownviewer 4.0.6
@jupyterlab/markedparser-extension 4.0.6
@jupyterlab/mathjax-extension 4.0.6
@jupyterlab/metadataform-extension 4.0.6
@jupyterlab/metadataform 4.0.6
@jupyterlab/mock-consumer 4.0.6
@jupyterlab/mock-extension 4.0.6
@jupyterlab/mock-incompat 0.1.0
@jupyterlab/mock-mime-extension 0.3.0
@jupyterlab/mock-package 0.1.0
@jupyterlab/mock-provider 4.0.6
@jupyterlab/mock-token 4.0.6
@jupyterlab/nbformat 4.0.6
@jupyterlab/notebook-extension 4.0.6
@jupyterlab/notebook 4.0.6
@jupyterlab/observables 5.0.6
@jupyterlab/outputarea 4.0.6
@jupyterlab/pdf-extension 4.0.6
@jupyterlab/property-inspector 4.0.6
@jupyterlab/rendermime-extension 4.0.6
@jupyterlab/rendermime-interfaces 3.8.6
@jupyterlab/rendermime 4.0.6
@jupyterlab/running-extension 4.0.6
@jupyterlab/running 4.0.6
@jupyterlab/services 7.0.6
@jupyterlab/settingeditor-extension 4.0.6
@jupyterlab/settingeditor 4.0.6
@jupyterlab/settingregistry 4.0.6
@jupyterlab/shortcuts-extension 4.0.6
@jupyterlab/statedb 4.0.6
@jupyterlab/statusbar-extension 4.0.6
@jupyterlab/statusbar 4.0.6
@jupyterlab/terminal-extension 4.0.6
@jupyterlab/terminal 4.0.6
@jupyterlab/theme-dark-extension 4.0.6
@jupyterlab/theme-light-extension 4.0.6
@jupyterlab/toc-extension 6.0.6
@jupyterlab/toc 6.0.6
@jupyterlab/tooltip-extension 4.0.6
@jupyterlab/tooltip 4.0.6
@jupyterlab/translation-extension 4.0.6
@jupyterlab/translation 4.0.6
@jupyterlab/ui-components-extension 4.0.6
@jupyterlab/ui-components 4.0.6
@jupyterlab/vega5-extension 4.0.6
@lezer/common 1.0.2
@lezer/cpp 1.1.0
@lezer/css 1.1.1
@lezer/generator 1.2.2
@lezer/highlight 1.1.4
@lezer/html 1.3.3
@lezer/java 1.0.3
@lezer/javascript 1.4.1
@lezer/json 1.0.0
@lezer/lr 1.3.3
@lezer/markdown 1.0.2
@lezer/php 1.0.1
@lezer/python 1.1.7
@lezer/rust 1.0.0
@lezer/xml 1.0.1
@lumino/algorithm 2.0.1
@lumino/application 2.2.1
@lumino/collections 2.0.1
@lumino/commands 2.1.3
@lumino/coreutils 2.1.2
@lumino/datagrid 2.2.0
@lumino/disposable 2.1.2
@lumino/domutils 2.0.1
@lumino/dragdrop 2.1.3
@lumino/keyboard 2.0.1
@lumino/messaging 2.0.1
@lumino/polling 2.1.2
@lumino/properties 2.0.1
@lumino/signaling 2.1.2
@lumino/virtualdom 2.0.1
@lumino/widgets 2.3.0
@nodelib/fs.scandir 2.1.5
@nodelib/fs.stat 2.0.5
@nodelib/fs.walk 1.2.8
@npmcli/agent 2.1.1
@npmcli/arborist 7.1.0
@npmcli/config 7.2.0
@npmcli/disparity-colors 3.0.0
@npmcli/fs 2.1.2
@npmcli/fs 3.1.0
@npmcli/git 5.0.3
@npmcli/installed-package-contents 2.0.2
@npmcli/map-workspaces 3.0.4
@npmcli/metavuln-calculator 7.0.0
@npmcli/move-file 2.0.1
@npmcli/name-from-folder 2.0.0
@npmcli/node-gyp 3.0.0
@npmcli/package-json 5.0.0
@npmcli/promise-spawn 7.0.0
@npmcli/query 3.0.0
@npmcli/run-script 7.0.1
@pkgjs/parseargs 0.11.0
@polka/url 1.0.0-next.21
@protobufjs/aspromise 1.1.2
@protobufjs/base64 1.1.2
@protobufjs/codegen 2.0.4
@protobufjs/eventemitter 1.1.0
@protobufjs/fetch 1.1.0
@protobufjs/float 1.0.2
@protobufjs/inquire 1.1.0
@protobufjs/path 1.1.2
@protobufjs/pool 1.1.0
@protobufjs/utf8 1.1.0
@rjsf/core 5.2.1
@rjsf/utils 5.2.1
@rjsf/validator-ajv8 5.2.1
@sigstore/bundle 2.1.0
@sigstore/protobuf-specs 0.2.1
@sigstore/sign 2.1.0
@sigstore/tuf 2.1.0
@sindresorhus/is 4.6.0
@szmarczak/http-timer 4.0.6
@tootallnate/once 2.0.0
@tufjs/canonical-json 2.0.0
@tufjs/models 2.0.0
@types/base16 1.0.2
@types/cacheable-request 6.0.3
@types/clone 2.1.1
@types/emscripten 1.39.7
@types/eslint-scope 3.7.4
@types/eslint 8.21.1
@types/estree 0.0.51
@types/estree 1.0.0
@types/geojson 7946.0.10
@types/glob 7.2.0
@types/html-minifier-terser 6.1.0
@types/http-cache-semantics 4.0.1
@types/json-schema 7.0.11
@types/keyv 3.1.4
@types/lodash 4.14.191
@types/long 4.0.1
@types/minimatch 3.0.5
@types/node 12.19.3
@types/node 13.13.52
@types/prop-types 15.7.5
@types/react 18.0.28
@types/responselike 1.0.0
@types/scheduler 0.16.2
@types/semver 7.5.0
@types/source-list-map 0.1.2
@types/treeify 1.0.0
@types/triple-beam 1.3.2
@types/webpack-sources 0.1.9
@verdaccio/commons-api 10.2.0
@verdaccio/config 6.0.0-6-next.71
@verdaccio/core 6.0.0-6-next.71
@verdaccio/file-locking 10.3.1
@verdaccio/file-locking 11.0.0-6-next.7
@verdaccio/local-storage 10.3.3
@verdaccio/logger-7 6.0.0-6-next.16
@verdaccio/logger-commons 6.0.0-6-next.39
@verdaccio/logger-prettify 6.0.0-6-next.10
@verdaccio/middleware 6.0.0-6-next.50
@verdaccio/search 6.0.0-6-next.2
@verdaccio/signature 6.0.0-6-next.2
@verdaccio/streams 10.2.1
@verdaccio/tarball 11.0.0-6-next.40
@verdaccio/ui-theme 6.0.0-6-next.71
@verdaccio/url 11.0.0-6-next.37
@verdaccio/utils 6.0.0-6-next.39
@vscode/debugprotocol 1.59.0
@webassemblyjs/ast 1.11.1
@webassemblyjs/floating-point-hex-parser 1.11.1
@webassemblyjs/helper-api-error 1.11.1
@webassemblyjs/helper-buffer 1.11.1
@webassemblyjs/helper-numbers 1.11.1
@webassemblyjs/helper-wasm-bytecode 1.11.1
@webassemblyjs/helper-wasm-section 1.11.1
@webassemblyjs/ieee754 1.11.1
@webassemblyjs/leb128 1.11.1
@webassemblyjs/utf8 1.11.1
@webassemblyjs/wasm-edit 1.11.1
@webassemblyjs/wasm-gen 1.11.1
@webassemblyjs/wasm-opt 1.11.1
@webassemblyjs/wasm-parser 1.11.1
@webassemblyjs/wast-printer 1.11.1
@webpack-cli/configtest 2.0.1
@webpack-cli/info 2.0.1
@webpack-cli/serve 2.0.1
@xtuc/ieee754 1.2.0
@xtuc/long 4.2.2
@yarnpkg/core 3.5.2
@yarnpkg/fslib 2.10.3
@yarnpkg/json-proxy 2.1.1
@yarnpkg/libzip 2.3.0
@yarnpkg/parsers 2.5.1
@yarnpkg/pnp 3.3.4
@yarnpkg/shell 3.2.5
JSONStream 1.3.5
abab 2.0.6
abbrev 1.1.1
abbrev 2.0.0
abort-controller 3.0.0
accepts 1.3.8
acorn-import-assertions 1.8.0
acorn-walk 8.2.0
acorn 8.8.2
agent-base 6.0.2
agent-base 7.1.0
agentkeepalive 4.3.0
agentkeepalive 4.5.0
aggregate-error 3.1.0
ajv-formats 2.1.1
ajv-keywords 3.5.2
ajv-keywords 5.1.0
ajv 6.12.6
ajv 8.12.0
ansi-escapes 6.0.0
ansi-regex 5.0.1
ansi-regex 6.0.1
ansi-styles 3.2.1
ansi-styles 4.3.0
ansi-styles 6.2.1
any-promise 1.3.0
anymatch 3.1.3
apache-md5 1.1.8
aproba 2.0.0
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are-we-there-yet 3.0.1
are-we-there-yet 4.0.0
argparse 1.0.10
argparse 2.0.1
array-flatten 1.1.1
array-union 2.1.0
arrify 2.0.1
asap 2.0.6
asn1 0.2.6
assert-plus 1.0.0
async 1.5.2
async 3.2.4
asynckit 0.4.0
atomic-sleep 1.0.0
aws-sign2 0.7.0
aws4 1.12.0
balanced-match 1.0.2
base16 1.0.0
base64-js 1.3.1
base64-js 1.5.1
bcrypt-pbkdf 1.0.2
bcryptjs 2.4.3
big.js 5.2.2
bignumber.js 9.0.1
bin-links 4.0.2
binary-extensions 2.2.0
bintrees 1.0.2
bl 5.1.0
body-parser 1.20.1
body-parser 1.20.2
boolbase 1.0.0
bootstrap 3.4.1
brace-expansion 1.1.11
brace-expansion 2.0.1
braces 3.0.2
browserslist 4.21.5
buffer-equal-constant-time 1.0.1
buffer-from 1.1.2
buffer 6.0.3
builtins 5.0.1
bytes 3.0.0
bytes 3.1.2
cacache 16.1.3
cacache 17.1.4
cacache 18.0.0
cacheable-lookup 5.0.4
cacheable-request 7.0.2
call-bind 1.0.2
camel-case 4.1.2
camelcase 5.3.1
caniuse-lite 1.0.30001464
caseless 0.12.0
chalk 2.4.2
chalk 3.0.0
chalk 4.1.0
chalk 5.2.0
chalk 5.3.0
chardet 0.7.0
chevrotain 9.1.0
child_process 1.0.2
chokidar 3.5.3
chownr 2.0.0
chrome-trace-event 1.0.3
ci-info 3.8.0
cidr-regex 3.1.1
clean-css 4.2.4
clean-css 5.3.2
clean-stack 2.2.0
cli-columns 4.0.0
cli-cursor 4.0.0
cli-spinners 2.6.1
cli-table3 0.6.3
cli-width 4.0.0
clipanion 3.2.0
clipanion 3.2.0-rc.4
cliui 8.0.1
clone-deep 4.0.1
clone-response 1.0.3
clone 1.0.4
clone 2.1.2
clsx 1.2.1
cmd-shim 6.0.1
color-convert 1.9.3
color-convert 2.0.1
color-name 1.1.3
color-name 1.1.4
color-string 1.9.1
color-support 1.1.3
color 3.2.1
colorette 2.0.20
colorspace 1.1.4
columnify 1.6.0
combined-stream 1.0.8
commander 2.20.3
commander 4.1.1
commander 7.2.0
commander 8.3.0
commander 9.2.0
commander 9.5.0
common-ancestor-path 1.0.1
compressible 2.0.18
compression 1.7.4
compute-gcd 1.2.1
compute-lcm 1.1.2
concat-map 0.0.1
configurable-http-proxy 4.5.6
console-control-strings 1.1.0
content-disposition 0.5.4
content-type 1.0.5
cookie-signature 1.0.6
cookie 0.5.0
cookies 0.8.0
core-js 3.30.2
core-util-is 1.0.2
corepack 0.20.0
cors 2.8.5
crelt 1.0.5
cross-spawn 7.0.3
crypto 1.0.1
css-loader 6.7.3
css-select 4.3.0
css-what 6.1.0
cssesc 3.0.0
csstype 3.0.10
d3-array 3.2.2
d3-color 3.1.0
d3-delaunay 6.0.2
d3-dispatch 3.0.1
d3-dsv 3.0.1
d3-force 3.0.0
d3-format 3.1.0
d3-geo-projection 4.0.0
d3-geo 3.1.0
d3-hierarchy 3.1.2
d3-interpolate 3.0.1
d3-path 3.1.0
d3-quadtree 3.0.1
d3-scale 4.0.2
d3-shape 3.2.0
d3-time-format 4.1.0
d3-time 3.1.0
d3-timer 3.0.1
dashdash 1.14.1
data-urls 2.0.0
dayjs 1.11.7
debug 2.6.9
debug 3.2.6
debug 4.3.4
decamelize 1.2.0
decompress-response 6.0.0
deep-extend 0.6.0
deepmerge 4.3.0
defaults 1.0.4
defer-to-connect 2.0.1
define-properties 1.2.0
delaunator 5.0.0
delayed-stream 1.0.0
delegates 1.0.0
depd 2.0.0
dependency-graph 0.11.0
destroy 1.2.0
detect-indent 6.1.0
detect-newline 3.1.0
diff 5.1.0
dir-glob 3.0.1
dom-converter 0.2.0
dom-serializer 1.4.1
domelementtype 2.3.0
domhandler 3.3.0
domhandler 4.3.1
domutils 2.8.0
dot-case 3.0.4
duplexer 0.1.2
duplexify 4.1.2
duplicate-package-checker-webpack-plugin 3.0.0
eastasianwidth 0.2.0
ecc-jsbn 0.1.2
ecdsa-sig-formatter 1.0.11
ee-first 1.1.1
electron-to-chromium 1.4.327
emoji-regex 8.0.0
emoji-regex 9.2.2
emojis-list 3.0.0
enabled 2.0.0
encodeurl 1.0.2
encoding 0.1.13
end-of-stream 1.1.0
end-of-stream 1.4.4
enhanced-resolve 5.12.0
entities 2.2.0
env-paths 2.2.1
envinfo 7.8.1
err-code 2.0.3
es-module-lexer 0.9.3
escalade 3.1.1
escape-html 1.0.3
escape-string-regexp 1.0.5
escape-string-regexp 4.0.0
escape-string-regexp 5.0.0
eslint-scope 5.1.1
esm 3.2.25
esprima 4.0.1
esrecurse 4.3.0
estraverse 4.3.0
estraverse 5.3.0
etag 1.8.1
event-target-shim 5.0.1
eventemitter3 4.0.7
events 3.3.0
exponential-backoff 3.1.1
express-rate-limit 5.5.1
express 4.18.2
extend 3.0.2
external-editor 3.1.0
extsprintf 1.3.0
fast-deep-equal 3.1.3
fast-glob 3.3.1
fast-json-patch 3.1.1
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fast-redact 3.1.2
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fastest-levenshtein 1.0.16
fastq 1.15.0
fecha 4.2.3
figures 5.0.0
fill-range 7.0.1
finalhandler 1.2.0
find-root 1.1.0
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fn.name 1.1.0
follow-redirects 1.15.2
font-awesome 4.7.0
foreground-child 3.1.1
forever-agent 0.6.1
form-data 2.3.3
forwarded 0.2.0
free-style 3.1.0
fresh 0.5.2
fs-extra 10.1.0
fs-minipass 2.1.0
fs-minipass 3.0.3
fs.realpath 1.0.0
fsevents 2.3.2
function-bind 1.1.1
gauge 4.0.4
gauge 5.0.1
gaxios 4.0.1
gcp-metadata 4.2.1
get-caller-file 2.0.5
get-intrinsic 1.2.0
get-stream 5.2.0
getpass 0.1.7
git-hooks-list 1.0.3
glob-parent 5.1.2
glob-to-regexp 0.4.1
glob 10.3.3
glob 6.0.4
glob 7.1.7
glob 7.2.3
glob 8.1.0
globby 10.0.0
globby 11.1.0
google-auth-library 6.1.3
google-p12-pem 3.0.3
google-protobuf 3.13.0
got 11.8.6
graceful-fs 4.2.11
grapheme-splitter 1.0.4
gtoken 5.0.5
gzip-size 6.0.0
handlebars 4.7.7
har-schema 2.0.0
har-validator 5.1.5
has-flag 3.0.0
has-flag 4.0.0
has-property-descriptors 1.0.0
has-symbols 1.0.3
has-unicode 2.0.1
has 1.0.3
he 1.2.0
highlight-words-core 1.2.2
hosted-git-info 7.0.0
html-loader 1.3.2
html-minifier-terser 5.1.1
html-minifier-terser 6.1.0
html-webpack-plugin 5.5.0
htmlparser2 4.1.0
htmlparser2 6.1.0
http-cache-semantics 4.1.1
http-errors 2.0.0
http-proxy-agent 5.0.0
http-proxy-agent 7.0.0
http-proxy 1.18.1
http-signature 1.2.0
http-status-codes 2.2.0
http2-wrapper 1.0.3
https-proxy-agent 5.0.0
https-proxy-agent 5.0.1
https-proxy-agent 7.0.1
humanize-ms 1.2.1
iconv-lite 0.4.24
iconv-lite 0.6.3
icss-utils 5.1.0
ieee754 1.2.1
ignore-walk 6.0.3
ignore 5.2.4
import-local 3.1.0
imurmurhash 0.1.4
indent-string 4.0.0
infer-owner 1.0.4
inflight 1.0.6
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rpds-py 0.10.4
ruamel.yaml.clib 0.2.7
ruamel.yaml 0.17.35
sander 22.0
scikit-learn 1.3.1
scipy 1.11.3
seaborn 0.13.0
setuptools 68.2.2
six 1.16.0
smirnoff99frosst 0 unknown
sniffio 1.3.0
soupsieve 2.5
stack-data 0.6.2
statsmodels 0.14.0
tables 3.9.1
tenacity 8.2.3
terminado 0.17.1
threadpoolctl 3.2.0
tidynamics 1.1.2
tinycss2 1.2.1
tomli 2.0.1
toolz 0.12.0
tornado 6.3.3
tqdm 4.66.1
traitlets 5.11.2
types-python-dateutil 2.8.19.14
typing-utils 0.1.0
typing_extensions 4.8.0
tzdata 2023.3
uri-template 1.3.0
urllib3 2.0.6
wcwidth 0.2.8
webcolors 1.13
webencodings 0.5.1
websocket-client 1.6.4
wheel 0.41.2
widgetsnbextension 4.0.9
xmltodict 0.13.0
zipp 3.17.0
zstandard 0.21.0