nfcore/deepvariant : dev
A Docker image for the nf-core/deepvariant pipeline.
Latest release: over 7 years ago - 3,875 downloads - 234 dependencies
JSONDependencies
- debian/libbz2-1.0 1.0.6-8.1
- debian/libc-bin 2.24-11 deb9u3
- debian/libc6 2.24-11 deb9u3
- debian/libcap-ng0 0.7.7-3 b1
- debian/libcap2 1:2.25-1
- debian/libcomerr2 1.43.4-2
- debian/libcurl3-gnutls 7.52.1-5 deb9u6
- debian/libcurl3 7.52.1-5 deb9u6
- debian/libdb5.3 5.3.28-12 deb9u1
- debian/libdebconfclient0 0.227
- debian/libedit2 3.1-20160903-3
- debian/libelf1 0.168-1
- debian/liberror-perl 0.17024-1
- debian/libexpat1 2.2.0-2 deb9u1
- debian/libfdisk1 2.29.2-1 deb9u1
- debian/libffi6 3.2.1-6
- debian/libgcc1 1:6.3.0-18 deb9u1
- debian/libgcrypt20 1.7.6-2 deb9u2
- debian/libgdbm3 1.8.3-14
- debian/libglib2.0-0 2.50.3-2
- debian/libglib2.0-data 2.50.3-2
- debian/libgmp10 2:6.1.2 dfsg-1
- debian/libgnutls30 3.5.8-5 deb9u3
- debian/libgpg-error0 1.26-2
- debian/libgpm2 1.20.4-6.2 b1
- debian/libgssapi-krb5-2 1.15-1 deb9u1
- debian/libhogweed4 3.3-1 b2
- debian/libice6 2:1.0.9-2
- debian/libicu57 57.1-6 deb9u2
- debian/libidn11 1.33-1
- debian/libidn2-0 0.16-1 deb9u1
- debian/libjs-excanvas 0.r3-4
- debian/libk5crypto3 1.15-1 deb9u1
- debian/libkeyutils1 1.5.9-9
- debian/libkrb5-3 1.15-1 deb9u1
- debian/libkrb5support0 1.15-1 deb9u1
- debian/libldap-2.4-2 2.4.44 dfsg-5 deb9u1
- debian/libldap-common 2.4.44 dfsg-5 deb9u1
- debian/liblz4-1 0.0~r131-2 b1
- debian/liblzma5 5.2.2-1.2 b1
- debian/libmagic-mgc 1:5.30-1 deb9u1
- debian/libmagic1 1:5.30-1 deb9u1
- debian/libmnl0 1.0.4-2
- debian/libmount1 2.29.2-1 deb9u1
- debian/libncurses5 6.0 20161126-1 deb9u2
- debian/libncursesw5 6.0 20161126-1 deb9u2
- debian/libnettle6 3.3-1 b2
- debian/libnghttp2-14 1.18.1-1
- debian/libp11-kit0 0.23.3-2
- debian/libpam-modules-bin 1.1.8-3.6
- debian/libpam-modules 1.1.8-3.6
- debian/libpam-runtime 1.1.8-3.6
- debian/libpam0g 1.1.8-3.6
- debian/libpcre3 2:8.39-3
- debian/libperl5.24 5.24.1-3 deb9u3
- debian/libpopt0 1.16-10 b2
- debian/libprocps6 2:3.3.12-3 deb9u1
- debian/libpsl5 0.17.0-3
- debian/libpython-stdlib 2.7.13-2
- debian/libpython2.7-minimal 2.7.13-2 deb9u2
- debian/libpython2.7-stdlib 2.7.13-2 deb9u2
- debian/libreadline7 7.0-3
- debian/librtmp1 2.4 20151223.gitfa8646d.1-1 b1
- debian/libsasl2-2 2.1.27~101-g0780600 dfsg-3
- debian/libsasl2-modules-db 2.1.27~101-g0780600 dfsg-3
- debian/libsasl2-modules 2.1.27~101-g0780600 dfsg-3
- debian/libselinux1 2.6-3 b3
- debian/libsemanage-common 2.6-2
- debian/libsemanage1 2.6-2
- debian/libsepol1 2.6-2
- debian/libserf-1-1 1.3.9-3
- debian/libsm6 2:1.2.2-1 b3
- debian/libsmartcols1 2.29.2-1 deb9u1
- debian/libsqlite3-0 3.16.2-5 deb9u1
- debian/libss2 1.43.4-2
- debian/libssh2-1 1.7.0-1
- debian/libssl1.0.2 1.0.2l-2 deb9u3
- debian/libssl1.1 1.1.0f-3 deb9u2
- debian/libstdc 6 6.3.0-18 deb9u1
- debian/libsvn1 1.9.5-1 deb9u1
- debian/libsystemd0 232-25 deb9u3
- debian/libtasn1-6 4.10-1.1 deb9u1
- debian/libtinfo5 6.0 20161126-1 deb9u2
- debian/libudev1 232-25 deb9u3
- debian/libunistring0 0.9.6 really0.9.3-0.1
- debian/libustr-1.0-1 1.0.4-6
- debian/libuuid1 2.29.2-1 deb9u1
- debian/libx11-6 2:1.6.4-3
- debian/libx11-data 2:1.6.4-3
- debian/libxau6 1:1.0.8-1
- debian/libxcb1 1.12-1
- debian/libxdmcp6 1:1.1.2-3
- debian/libxext6 2:1.3.3-1 b2
- debian/libxml2 2.9.4 dfsg1-2.2 deb9u2
- debian/libxmuu1 2:1.1.2-2
- debian/libxrender1 1:0.9.10-1
- debian/login 1:4.4-4.1
- debian/lsb-base 9.20161125
- debian/mawk 1.3.3-17 b3
- debian/mercurial-common 4.0-1 deb9u1
- debian/mercurial 4.0-1 deb9u1
- debian/mime-support 3.60
- debian/mount 2.29.2-1 deb9u1
- debian/multiarch-support 2.24-11 deb9u3
- debian/ncurses-base 6.0 20161126-1 deb9u2
- debian/ncurses-bin 6.0 20161126-1 deb9u2
- debian/netbase 5.4
- debian/openssh-client 1:7.4p1-10 deb9u3
- debian/openssl 1.1.0f-3 deb9u2
- debian/passwd 1:4.4-4.1
- debian/patch 2.7.5-1 b2
- debian/perl-base 5.24.1-3 deb9u3
- debian/perl-modules-5.24 5.24.1-3 deb9u3
- debian/perl 5.24.1-3 deb9u3
- debian/procps 2:3.3.12-3 deb9u1
- debian/psmisc 22.21-2.1 b2
- debian/publicsuffix 20180218.2049-0 deb9u1
- debian/python-minimal 2.7.13-2
- debian/python2.7-minimal 2.7.13-2 deb9u2
- debian/python2.7 2.7.13-2 deb9u2
- debian/python 2.7.13-2
- debian/readline-common 7.0-3
- debian/rename 0.20-4
- debian/rsync 3.1.2-1 deb9u1
- debian/sed 4.4-1
- debian/sensible-utils 0.0.9 deb9u1
- debian/sgml-base 1.29
- debian/shared-mime-info 1.8-1
- debian/subversion 1.9.5-1 deb9u1
- debian/sysvinit-utils 2.88dsf-59.9
- debian/tar 1.29b-1.1
- debian/tini 0.18.0
- debian/tzdata 2018d-0 deb9u1
- debian/ucf 3.0036
- debian/util-linux 2.29.2-1 deb9u1
- debian/wget 1.18-5 deb9u2
- debian/x11-common 1:7.7 19
- debian/xauth 1:1.0.9-1 b2
- debian/xdg-user-dirs 0.15-2 b1
- debian/xml-core 0.17
- debian/xz-utils 5.2.2-1.2 b1
- debian/zlib1g 1:1.2.8.dfsg-5
- debian/adduser 3.115
- debian/apt 1.4.8
- debian/base-files 9.9 deb9u4
- debian/base-passwd 3.5.43
- debian/bash 4.4-5
- debian/bsdutils 1:2.29.2-1 deb9u1
- debian/bzip2 1.0.6-8.1
- debian/ca-certificates 20161130 nmu1
- debian/coreutils 8.26-3
- debian/curl 7.52.1-5 deb9u6
- debian/dash 0.5.8-2.4
- debian/debconf 1.5.61
- debian/debian-archive-keyring 2017.5
- debian/debianutils 4.8.1.1
- debian/diffutils 1:3.5-3
- debian/dpkg 1.18.24
- debian/e2fslibs 1.43.4-2
- debian/e2fsprogs 1.43.4-2
- debian/file 1:5.30-1 deb9u1
- debian/findutils 4.6.0 git 20161106-2
- debian/gcc-6-base 6.3.0-18 deb9u1
- debian/git-man 1:2.11.0-3 deb9u3
- debian/git 1:2.11.0-3 deb9u3
- debian/gpgv 2.1.18-8~deb9u1
- debian/grep 2.27-2
- debian/gzip 1.6-5 b1
- debian/hostname 3.18 b1
- debian/init-system-helpers 1.48
- debian/iproute2 4.9.0-1 deb9u1
- debian/iputils-ping 3:20161105-1
- debian/javascript-common 11
- debian/krb5-locales 1.15-1 deb9u1
- debian/less 481-2.1
- debian/libacl1 2.2.52-3 b1
- debian/libapr1 1.5.2-5
- debian/libaprutil1 1.5.4-3
- debian/libapt-pkg5.0 1.4.8
- debian/libattr1 1:2.4.47-2 b2
- debian/libaudit-common 1:2.6.7-2
- debian/libaudit1 1:2.6.7-2
- debian/libblkid1 2.29.2-1 deb9u1
- debian/libbsd0 0.8.3-1
- US_export_policy:US_export_policy *
- charsets:charsets *
- cldrdata:cldrdata *
- com.google.guava:guava 15.0
- com.sun:jce 1.8.0_192
- com.sun:sunec 1.8.0_192
- com.sun:sunjce_provider 1.8.0_192
- com.sun:sunpkcs11 1.8.0_192
- commons-io:commons-io 2.4
- commons-logging:commons-logging 1.1.1
- dnsns:dnsns *
- dt:dt *
- jaccess:jaccess *
- jconsole:jconsole *
- jsse:jsse 1.8.0_192
- local_policy:local_policy *
- localedata:localedata *
- management-agent:management-agent *
- nashorn:nashorn 1.8.0_192-b01
- net.sf.jopt-simple:jopt-simple 5.0.3
- org.apache.commons:commons-compress 1.4.1
- org.apache.commons:commons-jexl 2.1.1
- org.apache.commons:commons-lang3 3.4
- org.apache.commons:commons-math3 3.5
- org.apache.logging.log4j:log4j-api 2.5
- org.apache.logging.log4j:log4j-core 2.5
- picard:picard 2.18.7-SNAPSHOT
- resources:resources 1.8.0_192
- rt:rt 1.8.0_192
- sa-jdi:sa-jdi *
- tools:tools *
- zipfs:zipfs 1.8.0_192
- SocksiPy-branch 1.01
- argparse 1.2.1
- boto 2.47.0
- coverage 3.7.1
- flask 0.10.1
- mock 1.0.1
- mock 2.0.0
- nose 1.3.3
- oauth2client 1.2
- oauth2client 2.2.0
- ordereddict 1.1
- rsa 3.1.4
- simplejson 3.5.2
- simplejson 3.6.5
- unittest2 0.5.1